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1.
Proc Natl Acad Sci U S A ; 115(2): 313-318, 2018 01 09.
Article in English | MEDLINE | ID: mdl-29279385

ABSTRACT

The sophisticated tail structures of DNA bacteriophages play essential roles in life cycles. Podoviruses P22 and Sf6 have short tails consisting of multiple proteins, among which is a tail adaptor protein that connects the portal protein to the other tail proteins. Assembly of the tail has been shown to occur in a sequential manner to ensure proper molecular interactions, but the underlying mechanism remains to be understood. Here, we report the high-resolution structure of the tail adaptor protein gp7 from phage Sf6. The structure exhibits distinct distribution of opposite charges on two sides of the molecule. A gp7 dodecameric ring model shows an entirely negatively charged surface, suggesting that the assembly of the dodecamer occurs through head-to-tail interactions of the bipolar monomers. The N-terminal helix-loop structure undergoes rearrangement compared with that of the P22 homolog complexed with the portal, which is achieved by repositioning of two consecutive repeats of a conserved octad sequence motif. We propose that the conformation of the N-terminal helix-loop observed in the Sf6-gp7 and P22 portal:gp4 complex represents the pre- and postassembly state, respectively. Such motif repositioning may serve as a conformational switch that creates the docking site for the tail nozzle only after the assembly of adaptor protein to the portal. In addition, the C-terminal portion of gp7 shows conformational flexibility, indicating an induced fit on binding to the portal. These results provide insight into the mechanistic role of the adaptor protein in mediating the sequential assembly of the phage tail.


Subject(s)
Podoviridae/metabolism , Viral Tail Proteins/chemistry , Viral Tail Proteins/metabolism , Virus Assembly , Amino Acid Motifs/genetics , Amino Acid Sequence , Bacteriophage P22/genetics , Bacteriophage P22/metabolism , Crystallography, X-Ray , Models, Molecular , Podoviridae/genetics , Protein Conformation , Sequence Homology, Amino Acid , Viral Tail Proteins/genetics
2.
Sci Rep ; 6: 39809, 2016 12 23.
Article in English | MEDLINE | ID: mdl-28009003

ABSTRACT

Vascular remodeling is an important complication of hypertension with oxidative stress-related profibrotic pathways involved. The transforming growth factor ß1 (TGF-ß1) has been shown to be a potential target of vasoprotection, and has multiple roles in vascular remodeling. Acetyl-11-Keto-ß-Boswellic Acid (AKBA) is one of the active principles of Boswellic acids, and shows antioxidant activity in many diseases. The study is to determine effects of AKBA on systemic oxidative stress of hypertension and vascular remodeling. In the experiments, spontaneously hypertensive rats (SHR) were used. And in vitro, fibroblast was pretreated with AKBA before Ang II stimuli. In the results, treatment of AKBA markedly reduced oxidative stress, and decreased vascular remodeling by restoring vascular wall parameters and improving vascular reactivity. AKBA dramatically reduced TGF-ß1 and Smad3 expression, as shown in immunofluorescence and immunohistochemistry. In cultured fibroblast, AKBA decreased intracellular ROS levels. Cell viability and proliferation, as well as migration were inhibited by AKBA. Additionally, treatment of AKBA significantly decreased TGF-ß1 secretion in culture supernatant. Expression of TGF-ß1, Smad3, P-Smad3 and Smad7 were also decreased by AKBA in fibroblast. In conclusion, AKBA is able to attenuate oxidative stress and profibrotic mechanisms, and improve vascular remodeling in hypertension through TGF-ß1/Smad3 pathway.


Subject(s)
Gene Expression Regulation/drug effects , Hypertension/metabolism , Oxidative Stress/drug effects , Transforming Growth Factor beta1/biosynthesis , Triterpenes/pharmacology , Vascular Remodeling/drug effects , Animals , Fibrosis , Hypertension/pathology , Rats , Rats, Inbred SHR , Rats, Inbred WKY , Reactive Oxygen Species/metabolism
3.
PLoS One ; 11(2): e0149337, 2016.
Article in English | MEDLINE | ID: mdl-26882199

ABSTRACT

The multi-layered cell envelope structure of Gram-negative bacteria represents significant physical and chemical barriers for short-tailed phages to inject phage DNA into the host cytoplasm. Here we show that a DNA-injection protein of bacteriophage Sf6, gp12, forms a 465-kDa, decameric assembly in vitro. The electron microscopic structure of the gp12 assembly shows a ~150-Å, mushroom-like architecture consisting of a crown domain and a tube-like domain, which embraces a 25-Å-wide channel that could precisely accommodate dsDNA. The constricted channel suggests that gp12 mediates rapid, uni-directional injection of phage DNA into host cells by providing a molecular conduit for DNA translocation. The assembly exhibits a 10-fold symmetry, which may be a common feature among DNA-injection proteins of P22-like phages and may suggest a symmetry mismatch with respect to the 6-fold symmetric phage tail. The gp12 monomer is highly flexible in solution, supporting a mechanism for translocation of the protein through the conduit of the phage tail toward the host cell envelope, where it assembles into a DNA-injection device.


Subject(s)
Bacteriophages/genetics , DNA, Viral/chemistry , Models, Molecular , Protein Multimerization , Viral Proteins/chemistry , Imaging, Three-Dimensional , Protein Structure, Tertiary , Solutions , Viral Proteins/metabolism
4.
Virology ; 476: 61-71, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25528417

ABSTRACT

Members of the Parvoviridae family all encode a non-structural protein 1 (NS1) that directs replication of single-stranded viral DNA, packages viral DNA into capsid, and serves as a potent transcriptional activator. Here we report the X-ray structure of the minute virus of mice (MVM) NS1 N-terminal domain at 1.45Å resolution, showing that sites for dsDNA binding, ssDNA binding and cleavage, nuclear localization, and other functions are integrated on a canonical fold of the histidine-hydrophobic-histidine superfamily of nucleases, including elements specific for this Protoparvovirus but distinct from its Bocaparvovirus or Dependoparvovirus orthologs. High resolution structural analysis reveals a nickase active site with an architecture that allows highly versatile metal ligand binding. The structures support a unified mechanism of replication origin recognition for homotelomeric and heterotelomeric parvoviruses, mediated by a basic-residue-rich hairpin and an adjacent helix in the initiator proteins and by tandem tetranucleotide motifs in the replication origins.


Subject(s)
DNA Breaks, Single-Stranded , DNA Helicases/chemistry , DNA Helicases/metabolism , Minute Virus of Mice/enzymology , Trans-Activators/chemistry , Trans-Activators/metabolism , Viral Nonstructural Proteins/chemistry , Viral Nonstructural Proteins/metabolism , Viral Proteins/chemistry , Animals , Base Sequence , DNA Helicases/genetics , DNA Replication , Mice , Minute Virus of Mice/chemistry , Minute Virus of Mice/genetics , Models, Molecular , Parvoviridae Infections/veterinary , Parvoviridae Infections/virology , Protein Binding , Protein Structure, Tertiary , Replication Origin , Rodent Diseases/virology , Trans-Activators/genetics , Viral Nonstructural Proteins/genetics , Viral Proteins/genetics , Viral Proteins/metabolism
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