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1.
Br J Clin Pharmacol ; 84(11): 2634-2644, 2018 11.
Article in English | MEDLINE | ID: mdl-30069897

ABSTRACT

AIMS: Trimethylamine-N-oxide (TMAO) is a novel cardiovascular risk marker. We explored the association of commonly used cardiovascular medications with TMAO levels in patients and validated the identified associations in mice. METHODS: Detailed history of drug treatment was recorded in 300 patients with cardiovascular disease without diabetes in an observational, cross-sectional study. Animal study was performed in CD1 mice. RESULTS: Median plasma TMAO (interquartile range) level was 2.144 (1.570-3.104) µmol l-1 . Among nine cardiovascular drug groups, the use of loop diuretics (0.510 ± 0.296 in users vs. 0.336 ± 0.272 in nonusers, P = 0.008) and mineralocorticoid receptor antagonists (0.482 ± 0.293 in users vs. 0.334 ± 0.272 in nonusers, P = 0.007) was associated with increased log-TMAO. Acute concomitant administration of furosemide or torasemide with TMAO in mice significantly influenced TMAO pharmacokinetic profile and almost doubled the plasma TMAO area under the curve. Furosemide decreased the TMAO excretion rate by 1.9-fold during the first 30 min after administration and increased TMAO concentrations in kidney, heart and liver, suggesting the interaction of furosemide and TMAO with efflux transporters. The concentrations of TMAO in blood plasma after the administration of the organic anion transporter inhibitor probenecid were not different from those of the control group, suggesting an effect not mediated by organic anion transporters. CONCLUSIONS: Loop diuretics increased plasma TMAO concentration by decreasing its urinary excretion rate. Loop diuretic use should be considered a potential confounder in TMAO studies.


Subject(s)
Cardiovascular Agents/pharmacology , Cardiovascular Diseases/drug therapy , Methylamines/blood , Sodium Potassium Chloride Symporter Inhibitors/pharmacology , Aged , Animals , Biomarkers/blood , Cardiovascular Diseases/blood , Cross-Sectional Studies , Female , Heart/embryology , Humans , Kidney/metabolism , Liver/metabolism , Male , Methylamines/administration & dosage , Mice , Middle Aged
2.
Exp Clin Endocrinol Diabetes ; 124(4): 251-6, 2016 Apr.
Article in English | MEDLINE | ID: mdl-27123785

ABSTRACT

Recent studies have revealed strong associations between systemic trimethylamine N-oxide (TMAO) levels, atherosclerosis and cardiovascular risk. In addition, plasma L-carnitine levels in patients with high TMAO concentrations predicted an increased risk for cardiovascular disease and incident major adverse cardiac events. The aim of the present study was to investigate the relation between TMAO and L-carnitine plasma levels and diabetes. Blood plasma samples were collected from 12 and 20 weeks old db/db mice and patients undergoing percutaneous coronary intervention. Diabetic compared to non-diabetic db/L mice presented 10-fold higher TMAO, but lower L-carnitine plasma concentrations at 12 weeks of age. After 8 weeks of observation, diabetic db/db mice had significantly increased body weight, insulin resistance and TMAO concentration in comparison to non-diabetic control. In 191 patients undergoing percutaneous coronary intervention the median (interquartile range) plasma concentration of TMAO was 1.8 (1.2-2.6) µmol/L. Analysis of the samples showed a bivariate association of TMAO level with age, total cholesterol and L-carnitine. The multivariate linear regression analysis revealed that, in addition to L-carnitine as the strongest predictor of log transformed TMAO (p<0.001), the parameters of age, diabetes status and body mass index (BMI) were independently associated with increased log transformed TMAO levels (p<0.01).Our data provide evidence that age, diabetes and BMI are associated with higher TMAO levels independently of L-carnitine. These data support the hypothesis of TMAO as a cardiovascular risk marker and warrant further investigation of TMAO for diabetes research applications.


Subject(s)
Body Mass Index , Cardiovascular Diseases/blood , Carnitine/blood , Diabetes Mellitus/blood , Methylamines/blood , Age Factors , Aged , Animals , Disease Models, Animal , Female , Humans , Male , Mice , Middle Aged
3.
Br J Pharmacol ; 172(5): 1319-32, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25363063

ABSTRACT

BACKGROUND AND PURPOSE: The important pathological consequences of ischaemic heart disease arise from the detrimental effects of the accumulation of long-chain acylcarnitines in the case of acute ischaemia-reperfusion. The aim of this study is to test whether decreasing the L-carnitine content represents an effective strategy to decrease accumulation of long-chain acylcarnitines and to reduce fatty acid oxidation in order to protect the heart against acute ischaemia-reperfusion injury. KEY RESULTS: In this study, we used a novel compound, 4-[ethyl(dimethyl)ammonio]butanoate (Methyl-GBB), which inhibits γ-butyrobetaine dioxygenase (IC50 3 µM) and organic cation transporter 2 (OCTN2, IC50 3 µM), and, in turn, decreases levels of L-carnitine and acylcarnitines in heart tissue. Methyl-GBB reduced both mitochondrial and peroxisomal palmitate oxidation rates by 44 and 53% respectively. In isolated hearts treated with Methyl-GBB, uptake and oxidation rates of labelled palmitate were decreased by 40%, while glucose oxidation was increased twofold. Methyl-GBB (5 or 20 mg·kg(-1)) decreased the infarct size by 45-48%. In vivo pretreatment with Methyl-GBB (20 mg·kg(-1)) attenuated the infarct size by 45% and improved 24 h survival of rats by 20-30%. CONCLUSIONS AND IMPLICATIONS: Reduction of L-carnitine and long-chain acylcarnitine content by the inhibition of OCTN2 represents an effective strategy to protect the heart against ischaemia-reperfusion-induced damage. Methyl-GBB treatment exerted cardioprotective effects and increased survival by limiting long-chain fatty acid oxidation and facilitating glucose metabolism.


Subject(s)
Carnitine/biosynthesis , Fatty Acids/metabolism , Myocardial Infarction/drug therapy , Myocardial Infarction/metabolism , Quaternary Ammonium Compounds/pharmacology , gamma-Aminobutyric Acid/analogs & derivatives , Animals , Biological Transport/drug effects , Dose-Response Relationship, Drug , Male , Molecular Structure , Myocardial Infarction/prevention & control , Organic Cation Transport Proteins/antagonists & inhibitors , Organic Cation Transport Proteins/metabolism , Organic Cation Transporter 2 , Oxidation-Reduction , Quaternary Ammonium Compounds/chemical synthesis , Quaternary Ammonium Compounds/chemistry , Rats , Rats, Wistar , Structure-Activity Relationship , gamma-Aminobutyric Acid/chemical synthesis , gamma-Aminobutyric Acid/chemistry , gamma-Aminobutyric Acid/pharmacology , gamma-Butyrobetaine Dioxygenase/antagonists & inhibitors , gamma-Butyrobetaine Dioxygenase/metabolism
4.
Exp Clin Endocrinol Diabetes ; 123(2): 95-100, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25343268

ABSTRACT

L-carnitine is a very popular food supplement due to its safety profile, antioxidant-type activity and suggested effects on energy metabolism pathways. L-carnitine participates in both fatty acid transport pathways and the export of acetyl groups out of the mitochondria. However, contradictory data exist concerning the pharmacological outcomes of L-carnitine treatment in diabetes mellitus, which is a highly prevalent metabolic disease characterised by hyperglycemia and associated with severe complications, including cardiovascular disease and dyslipidemia. Recently, the L-carnitine-derived metabolites, acylcarnitines and trimethylamine-N-oxide, have been associated with increased cardio-metabolic risks. This review aims to highlight the possible risks and benefits of L-carnitine supplementation.


Subject(s)
Carnitine/analogs & derivatives , Diabetes Mellitus/metabolism , Dietary Supplements/adverse effects , Carnitine/adverse effects , Humans , Risk
5.
Scand J Immunol ; 69(2): 110-8, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19170963

ABSTRACT

Artocarpus tonkinenesis (Moraceae) has been used in Vietnamese traditional medicine for the treatment of backache and joint diseases since many 100 years. We have previously shown that a crude extract of A. tonkinensis elicited anti-inflammatory effects in rat collagen-induced arthritis (CIA), with significant improvement of disease symptoms. However, the pharmacological basis of the bioactivity of A. tonkinensis extract is not known. In the present study, we have isolated four individual active components from A. tonkinensis extract by reverse phase high-pressure liquid chromatography. The structures of the compounds were determined by nuclear magnetic resonance (NMR) spectroscopy and mass spectrometry and their biological effects investigated. A novel biologically active flavonoid glucoside (5-hydroxy-8-hydroxymethyl-8-methyl-2-[4-(3,4,5-trihydroxy-6-hydroxymethyl-tetrahydro-pyran-2-yloxy)-phenyl]-8H-pyrano[3,2-g]chromen-4-one) with an average molecular mass of 514.49 Da was isolated.We have named the compound artonkin-4'-O-glucoside. The name 'artonkin' for the novel flavonoid part of the compound was coined from the Latin name of its source Artocarpus tonkinensis. The three other active flavonoid glucosides isolated and characterized were alphitonin-4-O-beta-D-glucoside, maesopsin-4-O-beta-D-glucoside and kaempherol-3-O-beta-D-glucoside. All four compounds were found to cause anti-inflammatory effect with different potencies. The anti-inflammatory effects demonstrated in the rat model of arthritis correlate well with the inhibition of mitogen-induced T-cell proliferation. Furthermore, the compounds inhibit production of cytokines, such as tumour necrosis factor-a and interferon-c, in mitogen-stimulated T cells in a concentration-dependent manner. We postulate that the isolated flavonoids suppress T-cell proliferation as well as cytokine expression and thereby contribute to an amelioration of arthritis severity in CIA.


Subject(s)
Anti-Inflammatory Agents/isolation & purification , Arthritis, Experimental/drug therapy , Artocarpus/chemistry , Flavonoids/isolation & purification , Glucosides/isolation & purification , Animals , Anti-Inflammatory Agents/chemistry , Anti-Inflammatory Agents/therapeutic use , Flavonoids/chemistry , Flavonoids/therapeutic use , Glucosides/chemistry , Glucosides/therapeutic use , Interferon-gamma/biosynthesis , Interleukin-6/biosynthesis , Lymphocyte Activation/drug effects , Magnetic Resonance Spectroscopy , Mass Spectrometry , Plant Leaves/chemistry , Rats , Tumor Necrosis Factor-alpha/biosynthesis
6.
J Physiol Pharmacol ; 54(3): 339-47, 2003 Sep.
Article in English | MEDLINE | ID: mdl-14566073

ABSTRACT

The aim of the present study was to evaluate in vivo effects on NO production of pharmacologically widely used, commercially available NOS inhibitors, structurally related to guanidine. We compared the NO inhibitory potency and selectivity of L-NAME, aminoguanidine and guanabenz in tissues of normal and LPS-stimulated rats using ex vivo EPR measurements of the NO radical in its complex with dithiocarbamate-Fe(II). The tissues studied were the brain cortex, kidney, liver, heart and testis. Differential inhibitory effects were seen for L-NAME, aminoguanidine and guanabenz when applied during basal or LPS-stimulated conditions. Aminoguanidine exerted inhibition of NO only after stimulation with LPS. Guanabenz had little effect on NO in liver, kidney, testis and heart under normal conditions, while it reduced the basal NO in brain cortex. After stimulation with LPS guanabenz afforded a partial inhibition of the NO formation in all tissues studied. L-NAME was a potent inhibitor of NO synthesis in all tested tissues, both during basal and LPS stimulated conditions. Our results show that compounds containing a guanidine moiety might possess different NOS inhibitory profiles in vivo.


Subject(s)
Ditiocarb/analogs & derivatives , Electron Spin Resonance Spectroscopy/methods , Guanidines/pharmacokinetics , Nitric Oxide/antagonists & inhibitors , Nitric Oxide/biosynthesis , Animals , Cerebral Cortex/chemistry , Cerebral Cortex/drug effects , Cerebral Cortex/metabolism , Citric Acid , Ditiocarb/analysis , Ditiocarb/metabolism , Ditiocarb/pharmacology , Ferrous Compounds/analysis , Ferrous Compounds/metabolism , Ferrous Compounds/pharmacology , Guanabenz/pharmacology , Guanidines/administration & dosage , Guanidines/pharmacology , Heart/drug effects , Injections, Intraperitoneal , Injections, Subcutaneous , Kidney/chemistry , Kidney/drug effects , Kidney/metabolism , Lipopolysaccharides/pharmacology , Liver/chemistry , Liver/drug effects , Liver/metabolism , Male , NG-Nitroarginine Methyl Ester/pharmacology , Rats , Rats, Wistar , Testis/chemistry , Testis/drug effects , Testis/metabolism
7.
EMBO J ; 20(19): 5347-53, 2001 Oct 01.
Article in English | MEDLINE | ID: mdl-11574466

ABSTRACT

The LCCL domain is a recently discovered, conserved protein module named after its presence in Limulus factor C, cochlear protein Coch-5b2 and late gestation lung protein Lgl1. The LCCL domain plays a key role in the autosomal dominant human deafness disorder DFNA9. Here we report the nuclear magnetic resonance (NMR) structure of the LCCL domain from human Coch-5b2, where dominant mutations leading to DFNA9 deafness disorder have been identified. The fold is novel. Four of the five known DFNA9 mutations are shown to involve at least partially solvent-exposed residues. Except for the Trp91Arg mutant, expression of these four LCCL mutants resulted in misfolded proteins. These results suggest that Trp91 participates in the interaction with a binding partner. The unexpected sensitivity of the fold with respect to mutations of solvent-accessible residues might be attributed to interference with the folding pathway of this disulfide-containing domain.


Subject(s)
Deafness/genetics , Hearing Loss, Sensorineural/genetics , Proteins/chemistry , Proteins/genetics , Amino Acid Sequence , Conserved Sequence , Extracellular Matrix Proteins , Humans , Models, Molecular , Molecular Sequence Data , Nuclear Magnetic Resonance, Biomolecular , Protein Folding , Protein Structure, Tertiary , Sequence Homology, Amino Acid
8.
Structure ; 9(6): 457-71, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11435111

ABSTRACT

BACKGROUND: ERp29 is a ubiquitously expressed rat endoplasmic reticulum (ER) protein conserved in mammalian species. Fold predictions suggest the presence of a thioredoxin-like domain homologous to the a domain of human protein disulfide isomerase (PDI) and a helical domain similar to the C-terminal domain of P5-like PDIs. As ERp29 lacks the double-cysteine motif essential for PDI redox activity, it is suggested to play a role in protein maturation and/or secretion related to the chaperone function of PDI. ERp29 self-associates into 51 kDa dimers and also higher oligomers. RESULTS: 3D structures of the N- and C-terminal domains determined by NMR spectroscopy confirmed the thioredoxin fold for the N-terminal domain and yielded a novel all-helical fold for the C-terminal domain. Studies of the full-length protein revealed a short, flexible linker between the two domains, homodimerization by the N-terminal domain, and the presence of interaction sites for the formation of higher molecular weight oligomers. A gadolinium-based relaxation agent is shown to present a sensitive tool for the identification of macromolecular interfaces by NMR. CONCLUSIONS: ERp29 is the first eukaryotic PDI-related protein for which the structures of all domains have been determined. Furthermore, an experimental model of the full-length protein and its association states was established. It is the first example of a protein where the thioredoxin fold was found to act as a specific homodimerization module, without covalent linkages or supporting interactions by further domains. A homodimerization module similar as in ERp29 may also be present in homodimeric human PDI.


Subject(s)
Endoplasmic Reticulum/chemistry , Heat-Shock Proteins/chemistry , Models, Molecular , Molecular Chaperones/chemistry , Thioredoxins/chemistry , Amino Acid Sequence , Dimerization , Molecular Sequence Data , Nuclear Magnetic Resonance, Biomolecular , Protein Conformation , Protein Folding , Sequence Homology, Amino Acid
9.
Biochemistry ; 39(50): 15585-91, 2000 Dec 19.
Article in English | MEDLINE | ID: mdl-11112546

ABSTRACT

The metabolism of benzo[a]pyrene (BP) is known to lead to a large number of oxygenated compounds, some of which can bind covalently to DNA. We have studied the integrated metabolism of BP in vivo in germ-free rats given (14)C-labeled BP. Urinary metabolites were separated into groups according to acidity using lipophilic ion exchangers. The groups were analyzed by mass spectrometry and were further fractionated by high-performance liquid chromatography. The fraction of urinary metabolites previously shown to contain N-acetylcysteine and glucuronic acid conjugates was found to contain derivatives of 7-oxo-benz[d]anthracene-3,4-dicarboxylic acid as major components. These compounds, which were identified by mass spectrometry and NMR, accounted for about 30% of the total metabolites in urine, demonstrating that, surprisingly, ring opening is a major pathway for metabolism of BP in the germ-free rat. The dicarboxylic acid may be excreted in urine as an ester glucuronide. By using the single cell gel electrophoresis or COMET assay, we were able to demonstrate that the anhydride of 7-oxo-benz[d]anthracene-3, 4-dicarboxylic acid was an efficient inducer of DNA damage. Taken together, these results indicate that the novel ring opening metabolic pathway may provide alternative mechanisms for the toxicity of BP.


Subject(s)
Benzo(a)pyrene/chemistry , Benzo(a)pyrene/toxicity , Animals , Bay-Region, Polycyclic Aromatic Hydrocarbon , Benzo(a)pyrene/metabolism , DNA Damage , Germ-Free Life , Rats
10.
Cell Mol Life Sci ; 57(2): 337-42, 2000 Feb.
Article in English | MEDLINE | ID: mdl-10766028

ABSTRACT

Proinsulin C-peptide ameliorates renal and autonomic nerve function and increases skeletal muscle blood flow, oxygen uptake and glucose transport in patients with insulin-dependent diabetes mellitus. These effects have in part been ascribed to the stimulatory influence of C-peptide on Na+,K+-ATPase and endothelial nitric oxide synthase. To evaluate the capacity of C-peptide to insert into lipid bilayers and form ion channels, C-peptide secondary structure and membrane interactions were studied with circular dichroism spectroscopy and size exclusion chromatography. C-peptide is shown to lack a stable secondary structure, both when part of proinsulin and when free in aqueous solution, although the N-terminal third of the peptide exhibits an alpha-helical conformation in trifluoroethanol. Moreover, C-peptide remains disordered in the aqueous solvent in the presence of lipid vesicles, regardless of vesicle composition. In conclusion, C-peptide is unlikely to elicit physiological effects through stable conformation-dependent interactions with lipid membranes.


Subject(s)
C-Peptide/chemistry , C-Peptide/metabolism , Liposomes/metabolism , Membrane Lipids/metabolism , Amino Acid Sequence , Animals , Cholesterol/metabolism , Chromatography, Gel , Circular Dichroism , Humans , Hydrogen-Ion Concentration , Liposomes/chemistry , Magnetic Resonance Spectroscopy , Micelles , Molecular Sequence Data , Phosphatidylcholines/metabolism , Phosphatidylserines/metabolism , Protein Structure, Secondary/drug effects , Rats , Solutions , Trifluoroethanol/metabolism , Trifluoroethanol/pharmacology
11.
Biochem Biophys Res Commun ; 255(1): 104-9, 1999 Feb 05.
Article in English | MEDLINE | ID: mdl-10082663

ABSTRACT

The p75 neurotrophin receptor (p75(NTR)) contains a conserved death domain module similar to that of the cytotoxic receptors Fas and TNFR-1. Here, we describe the selection of peptide ligands from a combinatorial library using a variation of the selectively-infective phage (SIP) method directed to the death domain of p75(NTR). The binding sites on the death domain of p75(NTR) were identified for a 15 amino acid residue peptide by nuclear magnetic resonance (NMR) spectroscopy. The selected peptides may be useful for probing the function of the p75(NTR) death domain and aid in defining its downstream signalling mechanism.


Subject(s)
Peptide Fragments/chemistry , Receptor, Nerve Growth Factor/chemistry , Amino Acid Sequence , Binding Sites , Ligands , Magnetic Resonance Spectroscopy , Molecular Sequence Data , Peptide Fragments/metabolism , Protein Binding , Protein Conformation , Receptor, Nerve Growth Factor/metabolism , Signal Transduction
12.
J Biomol NMR ; 15(3): 213-25, 1999 Nov.
Article in English | MEDLINE | ID: mdl-10677825

ABSTRACT

Intermolecular nuclear Overhauser effects (NOEs) were measured between the protons of various small solvent or gas molecules and the non-specific lipid transfer protein (ns-LTP) from wheat. Intermolecular NOEs were observed with the hydrophobic pocket in the interior of wheat ns-LTP, which grew in intensity in the order cyclopropane (saturated solution) < methane (140 bar) < ethane (40 bar) < acetonitrile (5% in water) < cyclohexane (saturated solution) < benzene (saturated solution). No intermolecular, NOEs were observed with dioxane (5% in water). The intermolecular NOEs were negative for all of the organic molecules tested. Intermolecular NOEs between wheat ns-LTP and water were weak or could not be distinguished from exchange-relayed NOEs. As illustrated by the NOEs with cyclohexane versus dioxane, the hydrophobic pocket in wheat ns-LTP preferably binds non-polar molecules. Yet, polar molecules like acetonitrile can also be accommodated. The pressure dependence of the NOEs between methane and wheat ns-LTP indicated incomplete occupancy, even at 190 bar methane pressure. In general, NOE intensities increased with the size of the ligand molecule and its vapor pressure. NMR of the vapor phase showed excellent resolution between the signals from the gas phase and those from the liquid phase. The vapor concentration of cyclohexane was fivefold higher than that of the dioxane solution, supporting the binding of cyclohexane versus uptake of dioxane.


Subject(s)
Carrier Proteins/chemistry , Nuclear Magnetic Resonance, Biomolecular/methods , Solvents/metabolism , Water/metabolism , Acetonitriles/metabolism , Antigens, Plant , Benzene/metabolism , Binding Sites , Carrier Proteins/metabolism , Cyclohexanes/metabolism , Cyclopropanes/metabolism , Dioxanes/metabolism , Ethane/metabolism , Gases , Ligands , Methane/metabolism , Models, Molecular , Plant Proteins , Triticum/chemistry
13.
J Biomol NMR ; 13(1): 73-6, 1999 Jan.
Article in English | MEDLINE | ID: mdl-21080265

ABSTRACT

An alternative scheme for selective water excitation is proposed. The pulse sequence saturates the resonances from the solute, allowing the observation of water-solute NOEs with low artifact levels. The water resonance is subsequently excited by a relatively non-selective 90° pulse. The scheme is compared to other selective water excitation schemes. 2D NOE-NOESY and ROE-NOESY pulse sequences are proposed which afford high sensitivity by efficient water excitation and flip-back by radiation damping, yet allow the use of short mixing times for the buildup of water-solute NOEs.

14.
J Biomol NMR ; 11(4): 445-50, 1998 May.
Article in English | MEDLINE | ID: mdl-9691285

ABSTRACT

Spin-state selective experiments, HSQC-alpha/beta and CT-HMQC-alpha/beta, are proposed for the simple and rapid measurement of scalar one-bond coupling constants in two-dimensional, 1H-detected 15N-1H or 13C-1H correlation experiments based on HSQC and HMQC schemes. Pairs of subspectra are obtained, containing either the high-field or the low-field component of the doublet representing the one-bond coupling constant. The subspectral editing procedure retains the full sensitivity of HSQC and HMQC spectra recorded without heteronuclear decoupling during data acquisition, with a spectral resolution similar to that of decoupled spectra.


Subject(s)
Escherichia coli Proteins , Nuclear Magnetic Resonance, Biomolecular/methods , Bacterial Proteins/chemistry , Escherichia coli , Nuclear Magnetic Resonance, Biomolecular/instrumentation , Protein Structure, Secondary , Repressor Proteins/chemistry
15.
Lipids ; 33(4): 355-63, 1998 Apr.
Article in English | MEDLINE | ID: mdl-9590622

ABSTRACT

Seeds of oat (Avena sativa L.) were recently shown to contain significant quantities of a new hydroxy acid, (15 R)-hydroxy-(9Z),(12Z)-octadecadienoic acid (trivial name, avenoleic acid). In the present work, avenoleate was found to be mainly (63%) localized in the glycolipid fraction of oat seed lipids. Fractionation of the glycolipids by thin-layer chromatography and reversed-phase high-performance liquid chromatography revealed the presence of a main molecular species which accounted for 20% of the total avenoleate content of oat seeds. Structural studies by chemical methods and mass spectrometry demonstrated that the avenoleate-containing glycolipid was a galactolipid assembled of one molecule of avenoleic acid, two molecules of linoleic acid, two molecules of D-galactose, and one molecule of glycerol. Degradation of the new galactolipid by chemical and enzymatic methods demonstrated the localization of acyl chains, i.e., linoleate at sn-1 and linoleoylavenoleate at sn-2. Nuclear magnetic resonance spectroscopy gave independent support for this structure and also demonstrated that the two galactoses formed an alpha-D-galactopyranosyl-1-6-beta-D-galactopyranosyl moiety which was bound to the sn-3 position. Based on these experiments, the new galactolipid could be formulated as 1-[(9'Z),(12'Z)-octadecadienoyl]-2-[(15''R)-[(9'''Z),(12'''Z)-o ctadecadienoyloxy]-(9''Z),(12''Z)-octadecadienoyl]-3-(alpha-D-g alactopyranosyl-1-6-beta-D-galactopyranosyl)-glycerol. Quantitatively, the amount of the avenoleate-containing galactolipid was of the same order of magnitude as those of individual molecular species of digalactosyldiacylglycerol containing nonoxygenated acyl chains. The content of the new galactolipid in oat seeds was 0.5-0.6 mg per g of seed.


Subject(s)
Avena/chemistry , Glycolipids/chemistry , Glycolipids/isolation & purification , Seeds/chemistry , Avena/metabolism , Carbohydrates/analysis , Carbohydrates/chemistry , Fatty Acids, Unsaturated/analysis , Fatty Acids, Unsaturated/chemistry , Galactolipids , Glycolipids/metabolism , Mass Spectrometry , Seeds/metabolism , Spectrophotometry, Infrared
16.
FEBS Lett ; 425(2): 341-4, 1998 Mar 27.
Article in English | MEDLINE | ID: mdl-9559676

ABSTRACT

The membrane-binding properties and pore-forming potential of the tumor-lysing and antibacterial polypeptide NK-lysin were investigated. Fluorescence quenching experiments show a drastic change of accessibility to Trp58 in solution and in association with a lipid membrane. Calcein release from large unilamellar vesicles and fluctuating conductivity observed across a planar lipid bilayer of asolectin show that NK-lysin renders lipid bilayers permeable in a transient fashion, indicating a nonspecific lipid interaction as the mechanism underlying the biological activity. FTIR experiments show the same amount and type of regular secondary structure of NK-lysin in the membrane as in aqueous solution and exclude a structural rearrangement into a set of parallel or antiparallel alpha-helices as the predominant conformation. The molecular mechanism of the membrane-destabilizing effect of NK-lysin is discussed.


Subject(s)
Anti-Infective Agents/metabolism , Lipid Bilayers/metabolism , Proteolipids/metabolism , Pulmonary Surfactants/metabolism , Models, Molecular
18.
FEBS Lett ; 440(3): 365-9, 1998 Dec 04.
Article in English | MEDLINE | ID: mdl-9872404

ABSTRACT

Peptide segments of multiple glycine and alanine residues prevent the proteolytic degradation of ubiquitinated proteins by the proteasome. The structure of a Gly/Ala-rich insert in IkappaB alpha was probed by nuclear magnetic resonance (NMR) spectroscopy, comparing IkappaB alpha samples with and without Gly/Ala-rich insert. Narrow 1H-NMR resonances at chemical shifts indicative of random coil conformations were observed in the difference spectrum. circular dichroism (CD) measurements further confirm that the mechanism of protection against proteolytic degradation is not based on structural transition or stabilization caused by the Gly/Ala-rich segment. In addition, most of the N- and C-terminal residues outside the ankyrin repeats in wild-type IkappaB alpha were found to be flexibly disordered.


Subject(s)
Cysteine Endopeptidases/metabolism , DNA-Binding Proteins/chemistry , I-kappa B Proteins , Multienzyme Complexes/metabolism , Alanine/chemistry , Amino Acid Sequence , Amino Acids/analysis , DNA-Binding Proteins/metabolism , Glycine/chemistry , Magnetic Resonance Spectroscopy , Molecular Sequence Data , NF-KappaB Inhibitor alpha , Peptides/chemistry , Pliability , Proteasome Endopeptidase Complex , Protein Conformation
20.
Nat Struct Biol ; 4(10): 793-5, 1997 Oct.
Article in English | MEDLINE | ID: mdl-9334742

ABSTRACT

NK-lysin is the first representative of a family of sequence related proteins--saposins, surfactant-associated protein B, pore forming amoeba proteins, and domains of acid sphingomyelinase, acyloxyacylhydrolase and plant aspartic proteinases--for which a structure has been determined.


Subject(s)
Glycoproteins/chemistry , Protein Conformation , Protein Folding , Proteolipids/chemistry , Pulmonary Surfactants/chemistry , Amino Acid Sequence , Animals , Conserved Sequence , Disulfides , Humans , Molecular Sequence Data , Nuclear Magnetic Resonance, Biomolecular , Protein Structure, Secondary , Saposins , Sequence Alignment , Sequence Homology, Amino Acid , Sphingolipid Activator Proteins , Swine
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