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1.
World J Gastroenterol ; 27(21): 2871-2894, 2021 Jun 07.
Article in English | MEDLINE | ID: mdl-34135559

ABSTRACT

BACKGROUND: Alternative splicing (AS) increases the diversity of mRNA during transcription; it might play a role in alteration of the immune microenvironment, which could influence the development of immunotherapeutic strategies against cancer. AIM: To obtain the transcriptomic and clinical features and AS events in stomach adenocarcinoma (STAD) from the database. The overall survival data associated with AS events were used to construct a signature prognostic model for STAD. METHODS: Differentially expressed immune-related genes were identified between subtypes on the basis of the prognostic model. In STAD, 2042 overall-survival-related AS events were significantly enriched in various pathways and influenced several cellular functions. Furthermore, the network of splicing factors and overall-survival-associated AS events indicated potential regulatory mechanisms underlying the AS events in STAD. RESULTS: An eleven-AS-signature prognostic model (CD44|14986|ES, PPHLN1|21214|AT, RASSF4|11351|ES, KIAA1147|82046|AP, PPP2R5D|76200|ES, LOH12CR1|20507|ES, CDKN3|27569|AP, UBA52|48486|AD, CADPS|65499|AT, SRSF7| 53276|RI, and WEE1|14328|AP) was constructed and significantly related to STAD overall survival, immune cells, and cancer-related pathways. The differentially expressed immune-related genes between the high- and low-risk score groups were significantly enriched in cancer-related pathways. CONCLUSION: This study provided an AS-related prognostic model, potential mechanisms for AS, and alterations in the immune microenvironment (immune cells, genes, and pathways) for future research in STAD.


Subject(s)
Adenocarcinoma , Alternative Splicing , Adenocarcinoma/genetics , Antigens, Neoplasm , Biomarkers, Tumor/genetics , Biomarkers, Tumor/metabolism , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Humans , Nuclear Proteins , Protein Phosphatase 2 , Stomach , Tumor Microenvironment
2.
Cell Death Dis ; 12(2): 205, 2021 02 24.
Article in English | MEDLINE | ID: mdl-33627631

ABSTRACT

A circRNA is a type of endogenous noncoding RNA that consists of a closed circular RNA molecule formed by reverse splicing; these RNAs are widely distributed in a variety of biological cells. In contrast to linear RNAs, circRNAs have no 5' cap or 3' poly(A) tail. They have a stable structure, a high degree of conservation, and high stability, and they are richly and specifically expressed in certain tissues and developmental stages. CircRNAs play a very important role in the occurrence and progression of malignant tumors. According to their origins, circRNAs can be divided into four types: exon-derived circRNAs (ecRNAs), intron-derived circRNAs (ciRNAs), circRNAs containing both exons and introns (EIciRNAs) and intergenic circRNAs. A large number of studies have shown that circRNAs have a variety of biological functions, participate in the regulation of gene expression and play an important role in the occurrence and progression of tumors. In this paper, the structure and function of circRNAs are reviewed, along with their biological role in malignant tumors of the digestive tract, in order to provide a reference for the diagnosis and treatment of digestive system neoplasms.


Subject(s)
Biomarkers, Tumor/genetics , Digestive System Neoplasms/genetics , RNA, Circular/genetics , Animals , Biomarkers, Tumor/metabolism , Digestive System Neoplasms/metabolism , Digestive System Neoplasms/pathology , Digestive System Neoplasms/therapy , Early Detection of Cancer , Gene Expression Regulation, Neoplastic , Humans , Molecular Diagnostic Techniques , Predictive Value of Tests , Prognosis , RNA, Circular/metabolism , Signal Transduction
3.
Cell Death Dis ; 11(2): 88, 2020 02 03.
Article in English | MEDLINE | ID: mdl-32015325

ABSTRACT

Ferroptosis is a new type of cell death that was discovered in recent years and is usually accompanied by a large amount of iron accumulation and lipid peroxidation during the cell death process; the occurrence of ferroptosis is iron-dependent. Ferroptosis-inducing factors can directly or indirectly affect glutathione peroxidase through different pathways, resulting in a decrease in antioxidant capacity and accumulation of lipid reactive oxygen species (ROS) in cells, ultimately leading to oxidative cell death. Recent studies have shown that ferroptosis is closely related to the pathophysiological processes of many diseases, such as tumors, nervous system diseases, ischemia-reperfusion injury, kidney injury, and blood diseases. How to intervene in the occurrence and development of related diseases by regulating cell ferroptosis has become a hotspot and focus of etiological research and treatment, but the functional changes and specific molecular mechanisms of ferroptosis still need to be further explored. This paper systematically summarizes the latest progress in ferroptosis research, with a focus on providing references for further understanding of its pathogenesis and for proposing new targets for the treatment of related diseases.


Subject(s)
Ferroptosis/physiology , Acute Kidney Injury/drug therapy , Acute Kidney Injury/pathology , Antioxidants/metabolism , Cell Death/drug effects , Cell Death/physiology , Ferroptosis/drug effects , Iron/metabolism , Lipid Metabolism , Lipid Peroxidation , Neoplasms/drug therapy , Neoplasms/pathology , Nervous System Diseases/drug therapy , Nervous System Diseases/pathology , Reperfusion Injury/drug therapy , Reperfusion Injury/pathology
4.
Zhongguo Wei Zhong Bing Ji Jiu Yi Xue ; 18(10): 623-5, 2006 Oct.
Article in Chinese | MEDLINE | ID: mdl-17038256

ABSTRACT

OBJECTIVE: To explore the value of monitoring CO(2) partial pressure of gastric mucosa (PiCO(2)) in patients with traumatic shock under enteral nutrition (EN) support. METHODS: Ninety-six patients who were clinically diagnosed as having traumatic shock were randomly divided into two groups: the test group and the control group. In the test group, EN was given after tissue oxygenation, indicated by the value of PiCO(2), approached normal and the clinical symptoms ameliorated. In control group EN was given at the early stage of recovery from shock. The course of convalescence of the primary disease, gastro-intestinal symptoms, the monitoring indexes, and the complications etc. were compared between the two groups. RESULTS: Acute physiology and chronic health evaluation II (APACHE II) scores were both gradually lowered in both groups. It was more significant in the control group than that in the test group 5 days later (both P<0.01). Compared with the control group, the cure rate in the test group was increased obviously (91.3% vs. 75.0%, P<0.01), and the hospital stay days were significantly less [(6.0+/-1.8) days vs. (7.5+/-2.3) days, P<0.01]. CONCLUSION: It is very important to choose the suitable time to give EN support in patients with traumatic shock, for it can protect and promote the recovery of the function of their intestinal tract, raise the survival rate.


Subject(s)
Enteral Nutrition , Shock, Traumatic/therapy , APACHE , Adolescent , Adult , Aged , Carbon Dioxide/metabolism , Child , Female , Gastric Mucosa/metabolism , Humans , Male , Middle Aged , Monitoring, Physiologic , Partial Pressure , Shock, Traumatic/metabolism , Time Factors , Treatment Outcome , Young Adult
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