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1.
Int J Biol Macromol ; 268(Pt 1): 131729, 2024 May.
Article in English | MEDLINE | ID: mdl-38653429

ABSTRACT

In this case, various characterization technologies have been employed to probe dissociation mechanism of cellulose in N,N-dimethylacetamide/lithium chloride (DMAc/LiCl) system. These results indicate that coordination of DMAc ligands to the Li+-Cl- ion pair results in the formation of a series of Lix(DMAc)yClz (x = 1, 2; y = 1, 2, 3, 4; z = 1, 2) complexes. Analysis of interaction between DMAc ligand and Li center indicate that Li bond plays a major role for the formation of these Lix(DMAc)yClz complexes. And the saturation and directionality of Li bond in these Lix(DMAc)yClz complexes are found to be a tetrahedral structure. The hydrogen bonds between two cellulose chains could be broken at the nonreduced end of cellulose molecule via combined effects of basicity of Cl- ion and steric hindrance of [Li (DMAc)4]+ unit. The unique feature of Li bond in Lix(DMAc)yClz complexes is a key factor in determination of the dissociation mechanism.


Subject(s)
Acetamides , Cellulose , Lithium Chloride , Cellulose/chemistry , Acetamides/chemistry , Lithium Chloride/chemistry , Lithium/chemistry , Hydrogen Bonding
2.
J Agric Food Chem ; 71(4): 1907-1920, 2023 Feb 01.
Article in English | MEDLINE | ID: mdl-36652295

ABSTRACT

Agricultural biomass wastes are an abundant feedstock for biorefineries. However, most of these wastes are not treated in the right way. Here, corn stalks (CSs) were assigned as the raw material to produce cellulose nanofibers (CNFs) via in situ Fenton oxidation treatment. In order to probe the formation mechanism of an in situ Fenton reactor, the bonding interaction of hydrated Fe2+ ions and fiber has been systemically studied based on adsorption experiments, IR spectroscopy, density functional theory (DFT) calculations, and Raman spectroscopy. The results indicate that the coordination of the hydrated Fe2+ ion to the fiber generates a quasi-octahedral-coordinated sphere around the Fe center. The Jahn-Teller distortion effect of the Fe center promotes the Fe-O2H2 bonding interaction via reduction of the energy gap of the dz2 orbital of the Fe center and π2py/π2pz orbitals of the H2O2 molecule. The oxidation treatment of the pretreated CS by the in situ Fenton process shows the formation of a new carboxyl group on the fiber surface. The scanning electron microscopy image shows that the Fenton-treated fiber was scattered into the nanosized CNFs with a diameter of up to 50 nm. Both experimental and theoretical studies show that the pseudo-first-order kinetic reaction could describe the in situ Fenton kinetics well. Moreover, the proposed catalytic cycle shows that the large thermodynamic barrier is the cleavage of the O-O bond of H2O2 to generate the •OH radical, and the whole catalytic cycle is found to be spontaneous at room temperature.


Subject(s)
Iron , Nanofibers , Iron/chemistry , Zea mays , Cellulose , Hydrogen Peroxide/chemistry , Oxidation-Reduction , Models, Theoretical
3.
Inorg Chem ; 61(48): 19156-19171, 2022 Dec 05.
Article in English | MEDLINE | ID: mdl-36414004

ABSTRACT

Fast selective catalytic reduction of nitrogen oxide with ammonia (NH3-SCR) (2NH3 + NO2 + NO → 2N2 + 3H2O) has aroused great interest in recent years because it is inherently faster than the standard NH3-SCR reaction (4NO + 4NH3 + O2 → 4N2 + 6H2O). In the present paper, the mechanism of the fast NH3-SCR reaction catalyzed by a series of single-atom catalysts (SACs), M1/PTA SACs (PTA = Keggin-type phosphotungstic acid, M = Mn, Fe, Co, Ni, Ru, Rh, Pd, Ir, and Pt), has been systematically studied by means of density functional theory (DFT) calculations. Molecular geometry and electronic structural analysis show that Jahn-Teller distortion effects promote an electron transfer process from N-H bonding orbitals of the NH3 molecule to the symmetry-allowed d orbitals (dxy and dx2-y2) of the single metal atom, which effectively weakens the N-H bond of the adsorbed NH3 molecule. The calculated free energy profiles along the favorable catalytic path show that decomposition of NH3 to *NH2 and *H species and decomposition of *NHNOH into N2 and H2O have high free energy barriers in the whole fast NH3-SCR path. A good synergistic effect between the Brønsted acid site (surface oxygen atom in the PTA support) and the Lewis acid site (single metal atom) effectively enhances the decomposition of NH3 to *NH2 and *H species. M1/PTA SACs (M = Ru, Rh, Pd, and Pt) were found to have potential for fast NH3-SCR reaction because of the relatively small free energy barrier and strong thermodynamic driving forces. We hope our computational results could provide some new ideas for designing and fabricating fast NH3-SCR catalysts with high activity.

4.
ACS Omega ; 7(45): 41586-41593, 2022 Nov 15.
Article in English | MEDLINE | ID: mdl-36406514

ABSTRACT

A meticulous understanding of the electronic structure of catalysts may provide new insight into catalytic performances. Here, we present a d-d interaction model to systematically study the electronic interaction in Cu-based single-atom alloys. We refine three types of electronic interactions according to the position of the antibonding state relative to the Fermi level. Moreover, we also find a special phenomenon in Mn-doped single-atom alloys in which no obvious electronic interaction is found, and the doped Mn metal seems to be a free atom. Then, taking Hf/Mn-doped single-atom alloys as an example, we discuss the electronic structure based on the density of states, charge transfer, crystal orbital Hamilton population, and wavefunctions. To support the proposed model and help analyze the data, we perform an energetic analysis of water dissociation in the water-gas shift reaction. The calculation results well confirm the d-d interaction model, where alloys with the position of the antibonding state close to the Fermi level exhibit excellent water dissociation ability in the water-gas shift reaction. However, the catalytic performance of the Mn-doped alloy is unsatisfactory, which is caused by its own special phenomenon.

5.
Sci Total Environ ; 826: 154002, 2022 Jun 20.
Article in English | MEDLINE | ID: mdl-35231517

ABSTRACT

Red mud (RM) was constantly reported to immobilize soil cadmium (Cd) and reduce Cd uptake by crops, but few studies investigated whether and how RM influenced rhizobacteria communities, which was a vital factor determining Cd bioavailability and plant growth. To address this concern, high-throughput sequencing and bioinformatics were used to analyze microbiological mechanisms underlying RM application reducing Cd accumulation in edible amaranth. Based on multiple statistical models (Detrended correspondence analysis, Bray-Curtis, weighted UniFrac, and Phylogenetic tree), this study found that RM reduced Cd content in plants not only through increasing rhizosphere soil pH, but by reshaping rhizobacteria communities. Special taxa (Alphaproteobacteria, Gammaproteobacteria, Actinobacteriota, and Gemmatimonadota) associated with growth promotion, anti-disease ability, and Cd resistance of plants preferentially colonized in the rhizosphere. Moreover, RM distinctly facilitated soil microbes' proliferation and microbial biofilm formation by up-regulating intracellular organic metabolism pathways and down-regulating cell motility metabolic pathways, and these microbial metabolites/microbial biofilm (e.g., organic acid, carbohydrates, proteins, S2-, and PO43-) and microbial cells immobilized rhizosphere soil Cd via the biosorption and chemical chelation. This study revealed an important role of reshaped rhizobacteria communities acting in reducing Cd content in plants after RM application.


Subject(s)
Alphaproteobacteria , Soil Pollutants , Alphaproteobacteria/metabolism , Bacteria/metabolism , Cadmium/analysis , Crops, Agricultural/metabolism , Phylogeny , Rhizosphere , Soil/chemistry , Soil Pollutants/analysis
6.
Angew Chem Int Ed Engl ; 60(9): 4864-4871, 2021 Feb 23.
Article in English | MEDLINE | ID: mdl-33179405

ABSTRACT

In this work, we rationally designed a series of crystalline and stable dioxin-linked metallophthalocyanine covalent organic frameworks (COFs; MPc-TFPN COF, M=Ni, Co, Zn) under the guidance of reticular chemistry. As a novel single-site catalysts (SSCs), NiPc/CoPc-TFPN COF exhibited outstanding activity and selectivity for electrocatalytic CO2 reduction (ECR; Faradaic efficiency of CO (FECO )=99.8(±1.24) %/ 96.1(±1.25) % for NiPc/CoPc-TFPN COF). More importantly, when coupled with light, the FECO and current density (jCO ) were further improved across the applied potential range (-0.6 to -1.2 V vs. RHE) compared to the dark environment for NiPc-TFPN COF (jCO increased from 14.1 to 17.5 A g-1 at -0.9 V; FECO reached up to ca. 100 % at -0.8 to -0.9 V). Furthermore, an in-depth mechanism study was established by density functional theory (DFT) simulation and experimental characterization. For the first time, this work explored the application of COFs as photo-coupled electrocatalysts to improve ECR efficiency, which showed the potential of using light-sensitive COFs in the field of electrocatalysis.

7.
Phys Chem Chem Phys ; 22(48): 28423-28433, 2020 Dec 23.
Article in English | MEDLINE | ID: mdl-33305302

ABSTRACT

The use of boron (B) atoms as transition metal mimics opens the door to new research in catalytic chemistry. An emerging class of compounds, bis(Lewis base)borylenes with an electron-rich B(i) center, are potential metal-free catalysts for dinitrogen bonding and reduction. Here, the molecular geometry, electronic structure, and possible reaction mechanism of a series of bis(Lewis base)borylene-dinitrogen compounds corresponding to the nitrogen reduction reaction have been investigated by using density functional theory (DFT) calculations. Our DFT calculations show that these free borylene compounds possess radical features and have the capability to activate N2 molecules via an effective combination of π(B → N2), π(N2 → B), and σ(N2 → B) electron transfer processes. The possible reaction mechanisms for direct conversion of N2 into NH3 for these bis(Lewis base)borylene-dinitrogen compounds have been systematically investigated along distal and alternating paths. The calculated free energy profiles indicate that the limiting potential of a bis(phosphine)borylene-dinitrogen compound is comparable to that of metal-based catalysts, which is the most promising candidate for the reduction of N2 to NH3via the alternating mechanism among all compounds studied here. The electronic structure analysis shows that the B center plays the role of an electron donor and acceptor alternatively in the consecutive six protonation and reduction processes, and thus acts as the electron transfer medium.

8.
ACS Omega ; 5(40): 25552-25560, 2020 Oct 13.
Article in English | MEDLINE | ID: mdl-33073081

ABSTRACT

The degradation mechanism of benzo[a]pyrene (BaP) initiated by •OH and 1O2 in aqueous solution is investigated by density functional theory calculations. The main degradation products are BaP-1,6-quinone, BaP-3,6-quinone, BaP-4,6-quinone, and BaP-6,12-quinone. •OH and HO2 are the main intermediate radical species. At a low initial concentration of •OH, 1O2 could be a primary driver for BaP degradation. The degradation mechanism includes six consecutive elementary reactions: (1) 1O2 initiation forming BaP-6-OO. (2) 1,3 H-shift (H atom shifts to the OO group) that is promoted by H2O, forming BaP-6-OOH. (3) BaP-6-OOH decomposes into the •OH radical and BaP-6-O. (4) •OH addition to BaP-6-O forming BaP-6-O-1(3,4,12)-OH. (5) Extracting the H atom from the carbon with the OH group by 1O2. (6) Extracting the H atom from the OH group by HO2. At a high initial concentration of •OH, the •OH-initiated and 1O2-initiated degradation reactions of BaP are both feasible. The degradation mechanism includes six consecutive elementary reactions: (1) •OH initiation forming BaP-6-OH or 1O2 initiation forming BaP-6-OO. (2) 1O2 addition to BaP-6-OH forming BaP-6-OH-12(1,3,4)-OO or •OH addition to BaP-6-OO forming BaP-6-OO-12(1,3,4)-OH. (3) Extracting the H atom from the carbon with the OH group by 1O2, forming HO2. (4) 1,3 H-shift (H-shift from the carbon to the OO group), promoted by H2O. (5) The loss of the OH radical. (6) Abstracting the H atom from the OH group by HO2. In this paper, the formation of BaP-4,6-quinone via the BaP degradation is first reported. Water participates in the elementary reaction in which the H atom attached on the aromatic ring shifts to the OO group, serving as a bridge that stabilizes the transition state and transports the proton. A comprehensive investigation explains the degradation mechanism of BaP initiated by •OH and 1O2 in aqueous solution.

9.
Environ Sci Technol ; 53(21): 12893-12903, 2019 Nov 05.
Article in English | MEDLINE | ID: mdl-31595750

ABSTRACT

In the present paper, the mechanisms of N2O reduction by H2 were systemically examined over various polyoxometalate-supported single-atom catalysts (SACs) M1/PTA (M = Fe, Co, Mn, Ru, Rh, Os, Ir, and Pt; PTA = [PW12O40]3-) by means of density functional theory calculations. Among these M1/PTA SACs, Os1/PTA SAC possesses high activity for N2O reduction by H2 with a relatively low rate-determining barrier. The favorable catalytic pathway involves the first and second N2O decomposition over the Os1/PTA SAC and hydrogenation of the key species after the second N2O decomposition. Molecular geometry and electronic structure analyses along the favorable reaction pathway indicate that a strong charge-transfer cooperative effect of metal and support effectively improves the catalytic activity of Os1/PTA SAC. The isolated Os atom not only plays the role of adsorption and activation of the N2O molecule but also works as an electron transfer medium in the whole reaction process. Meanwhile, the PTA support with very high redox stability has also been proven to be capable of transporting the electron to promote the whole reaction. We expect that our computation results can provide ideas for designing new SACs for N2O reduction by using H2 selective catalytic reduction technology.


Subject(s)
Density Functional Theory , Adsorption , Catalysis , Hydrogenation , Phosphotungstic Acid
11.
Phys Chem Chem Phys ; 21(19): 9975-9986, 2019 May 15.
Article in English | MEDLINE | ID: mdl-31041984

ABSTRACT

Density functional theory (DFT) calculations have been employed to probe the reaction mechanism of NO reduction with CO over a Cu1/PMA (PMA is the phosphomolybdate, Cs3PMo12O40) single-atom catalyst (SAC). Several important aspects of the catalytic system were addressed, including the generation of oxygen vacancies (Ov), formation of N2O2 intermediates, scission of the N-O bond of N2O2 intermediates to form N2O or N2, and decomposition of N2O to form N2. Unlike most previous theoretical studies, which tend to explore the reaction mechanism of polyoxometalate (POM) systems based on the isolated anionic unit, here, we build a model of the catalytic system with neutral species by introduction of counter cations to model the solid structure of the Cu1/PMA SAC. The major findings of our present study are: (1) CO adsorption on Cu sites leads to the formation of cationic Cu carbonyl species; (2) the Oc atom at the surface of the PMA support can easily react with the adsorbed CO to generate a Cu-Ov pair; (3) the Cu-Ov pair embedded on PMA is found to be the active site, not only for the formation of N2O2* by the reaction of two NO molecules via an Eley-Rideal pathway but also for the decomposition of N2O to form N2; (4) the adsorption of a NO molecule on the Cu-Ov pair with a bridging model results in charge transfer from the Cu atom to the π* antibonding orbital of the NO molecule; (5) IR spectroscopy of the key intermediates has been identified based on our DFT calculations; and (6) the Cu atom serves as an electron acceptor in Ov formation steps and an electron donor in N2O2 decomposition steps, and thus represents an electron reservoir. These results suggest that the POM-supported SAC with the cheaper Cu element is an efficient catalyst for the reaction between CO and NO.

12.
Inorg Chem ; 58(12): 7852-7862, 2019 Jun 17.
Article in English | MEDLINE | ID: mdl-31141350

ABSTRACT

Molecular geometry, electronic structure, and possible reaction mechanism of a series of mono-transition-metal-substituted Keggin-type polyoxometalate (POM)-dinitrogen complexes [PW11O39M(N2)] n- (M = Cr, Mn, Fe, Co, Ni, Cu, Zn, Mo, Tc, Ru, Rh, Pd, Ag, Cd, W, Re, Os, Ir, Pt, Au, and Hg) have been investigated by using density functional theory (DFT) calculations with M06L functional. The calculated adsorption energy of N2 molecule, N-N bond length, N-N stretching frequency, and the NBO charge on the coordinated N2 moiety indicate that MoII-, TcII-, WII-, ReII-, and OsII-POM complexes are significant for binding and activation of the inert N2 molecule. The degree of the N2 activation can be classified into the "moderately activated" category according to Tuczek's sense [ J. Comput. Chem. 2006 , 27 , 1278 ]. Electronic structure and NBO analysis indicate that the terminal N atom of the coordinated N2 molecule in these POM-dinitrogen complexes possesses more negative charge relative to the bridge N atom because Jahn-Teller distorted effects lead to an effective orbital mixture between σ2s* orbital of N2 and d z2 orbital of transition metal center. And the mono-lacunary Keggin-type POM ligand with five oxygen donor atoms serves as a strong electron donor to the bivalent metal center. Meanwhile, a catalytic cycle for direct conversion of N2 into NH3 has been systematically investigated based on a Re-POM complex along distal, alternating, and enzymatic pathways. The calculated free energy profile of the three catalytic cycles indicates that the distal mechanism is the favorable pathway in the presence of proton and electron donors.

13.
Dalton Trans ; 48(18): 6228-6235, 2019 May 07.
Article in English | MEDLINE | ID: mdl-30984930

ABSTRACT

The discrete anionic structure of polyoxometalates (POMs) at the interface is more like a separate small "island", which effectively prevents the diffusion of single atoms and prohibits the agglomeration and generation of metal particles; thus, POMs can enhance the sintering-resistant behavior and increase metal loading on the surface of single-atom catalysts (SACs). To explore the catalytic performance of POM-supported SACs for CO oxidation, we employed density functional theory (DFT) calculations to gain an understanding of some important aspects, including the CO adsorption, the formation of oxygen vacancies, and the activity of the surface oxygen species, of the catalytic system. Compared to previous theoretical studies, in which the catalytic behavior of POMs has been investigated based on the anionic unit with the highest negative charge, herein, we have constructed a model of the POM-supported SACs, which are neutral species. Our DFT calculations indicated that in the series of the SACs studied herein, (1) upon anchoring of a single metal atom on the POM surface, four key surface oxygen atoms were lifted from the POM surface to form a new interface, and thus, the surface oxygen species were activated; (2) CO adsorbed more strongly on the Ir, Os, Rh, Pt, and Ru sites than on the Fe, Mn, and Co sites; (3) it was easy to form an oxygen vacancy on the POM surface in the case of the Pt system when compared with the other systems; (4) the difference in the surface oxygen species for CO oxidation was remarkable, and the Oc atom at the catalyst interface had higher reactivity for CO oxidation as compared to the Ob atom in the Pt system studied herein; and (5) the single Pt atom served as an electron reservoir in the CO oxidation along the reaction pathway.

14.
Inorg Chem ; 58(8): 5221-5229, 2019 04 15.
Article in English | MEDLINE | ID: mdl-30920211

ABSTRACT

In general, reduction of N2O by CO is first performed by N2O decomposition over a catalyst surface to release N2 and form an active oxygen species, and subsequently CO is oxidized by the active oxygen species to produce CO2. However, the strong adsorption behavior of CO on the catalyst surface usually inhibits adsorption and decomposition of N2O, which leads to a low activity or poisoning of catalysts. In the present paper, a Mars-van Krevelen (MvK) [correction] mechanism has been probed based on a series of phosphotungstic acid (PTA) supported single-atom catalysts (SACs), M1/PTA (M = Fe, Co, Mn, Rh, Ru, Ir, Os, Pt, and Pd). Although the calculated adsorption energy of CO is exceedingly higher than N2O for our studied systems, the adsorbed CO could react with the surface oxygen atom of the PTA support through the MvK mechanism to form an oxygen vacancy on the PTA surface. N2O acts as an oxygen donor to replenish the PTA support and release N2 in the whole reaction process. This proposed reaction mechanism avoids competitive adsorption and poisoning of the catalyst caused by CO. The calculated adsorption energy, oxygen vacancy formation energy, and the free energy profiles show that the catalytic activity of Pd1/PTA, Rh1/PTA, and Pt1/PTA SACs is quite high, especially for Pt1/PTA and Pd1/PTA systems. Meanwhile, molecular geometry and electronic structure analysis along the favorable reaction pathway indicates that the metal single atom not only plays the role of adsorbing CO and activating surface atoms of the PTA support but also works as an electron transfer media in the whole reaction process. We expect that the present calculated results could provide some clues for the search for appropriate catalyst for reduction of N2O to N2 by CO at low temperature.

15.
J Mol Graph Model ; 85: 56-67, 2018 10.
Article in English | MEDLINE | ID: mdl-30077051

ABSTRACT

In the present paper, the reaction mechanism corresponding to activation of hydrogen peroxide (H2O2) by a divanadium-substituted polyoxometalate (POM) [γ-PV2W10O38(µ-OH)2]3- (I) to form catalytic active species, peroxo complex [γ-PV2W10O38(µ-η2,η2-O2)]3- (III), was studied by using the density functional theory (DFT) calculations method with B3LYP functional. The results indicate that coordination of H2O2 to I proceeds via a vanadium-center-assisted proton transfer pathway to remove the first water molecule and form a hydroperoxy intermediate [γ-PV2W10O38(µ-OH) (µ-OOH)]3- (II). And intermediate II occurs through three successive water-assisted proton transfer steps to remove the second water molecule and finally forms catalytic active species. The calculated overall energy profiles show that coordination of H2O2 to vanadium center requires a proton transfer barrier of about 24 kcal mol-1. A detailed comparison of molecular geometries and electronic structure shows that the catalytic active species has a very interesting structural feature, where a superoxide radical (O2-) was embedded into two vanadium centers, and may be a potential nucleophile. The unique withdrawing electron properties and flexible bonding ability of the γ-Keggin-type POM ligand contribute to the formation of O2- radical. The tunable alternate arrangement of W-O bond series in γ-Keggin-type POM ligand contributes to the flexibility of the γ-Keggin-type POM ligand. Meanwhile, our DFT calculations show a good performance of B3LYP-gauge-independent atomic orbital (IGAIM) method for the calculation of 1H NMR parameters of divanadium-substituted phosphotungstate.


Subject(s)
Hydrogen Peroxide/chemistry , Models, Molecular , Tungsten Compounds/chemistry , Vanadium/chemistry , Catalysis , Crystallography, X-Ray , Kinetics , Molecular Structure , Protons
16.
J Mol Model ; 24(7): 185, 2018 Jun 30.
Article in English | MEDLINE | ID: mdl-29961169

ABSTRACT

Fused hexaphyrins have many physical and chemical properties and can coordinate transition metal ions. In this study, we investigated the geometric structure, charge decomposition analysis (CDA), spin density, frontier molecular orbital (FMO) compositions and absorption spectra of four oxygen doubly N-confused hexaphyrin (1.1.1.1.1.1) (ONCP) complexes with the metal ions Co(II), Ni(II), Cu(II) and Zn(II) (designated ONCP-d-Co, ONCP-d-Ni, ONCP-d-Cu and ONCP-d-Zn). Based on their energies, geometric structures, FMO characteristics and comparison to experiments, ONCP-d-Co and ONCP-d-Cu have the mix-states of the triplet state and broken-symmetry state (antiferromagnetic state) rather than the spin singlet of a closed shell as previously reported. Moreover, based on analyses of the spin density and spin population of the spin triplet ONCP-d-Co and ONCP-d-Cu complexes, the charge transfer in ONCP-d-Cu is greater than that in ONCP-d-Co because the spin density in ONCP-d-Cu is concentrated not only on the Cu ion but also on the ONCP ligand. Thus, the CDA value for ONCP-d-Cu is larger. Finally, through comparative analysis of the FMO compositions and absorption spectra, the complexes and ligand are shown to have very similar absorption spectra with characteristics that arise mainly from π → π* transitions both in the B-band and the Q-band, which is due to the FMO compositions being dominated by the highly delocalized conjugated system, rather than by the metal ions. The absorption maxima of the Q-band are ONCP-d-Co (1020 nm) > ONCP-d-Zn (1012 nm) > ONCP-d-Ni (997 nm) > ONCP-d-Cu (988 nm), which is inversely proportional to the energy gap in their FMOs. Graphical Abstract The present work investigates the geometric structure, charge decomposition analysis (CDA), spin density, frontier molecular orbital (FMO) compositions and absorption spectra of four oxygen doubly N-confused hexaphyrin (1.1.1.1.1.1) (ONCP) complexes with the metal ions Co(II), Ni(II), Cu(II) and Zn(II) (designated ONCP-d-Co, ONCP-d-Ni, ONCP-d-Cu and ONCP-d-Zn). Based on their energies, geometric structures, FMO characteristics and comparison to experiments, ONCP-d-Co and ONCP-d-Cu have the mix-state of the triplet state and broken-symmetry state (antiferromagnetic state) rather than the spin singlet of a close shell as were previously reported. Meanwhile, ONCP-d-Ni and ONCP-d-Zn show spin singlet structure. The calculated CDA shows the following order: ONCP-d-Cu (1.487) > ONCP-d-Ni (1.255) > ONCP-d-Co (1.211) > ONCP-d-Zn (1.201). Through comparisons of spin density and spin populations of ONCP-d-Co and ONCP-d-Cu, charge transfer between Cu and ligand ONCP is greater than that of Co and ONCP, which makes the CDA value of ONCP-d-Cu obviously larger than that of the other complexes.

17.
Inorg Chem ; 56(17): 10496-10504, 2017 Sep 05.
Article in English | MEDLINE | ID: mdl-28820252

ABSTRACT

Geometrical structures, metal-support interactions, and infrared (IR) spectroscopy of a series of M1/POM (M = Cu, Zn, Ag, and Au; POM = [PW12O40]3-) single-atom catalysts (SACs), and catalytic cycle for alkene epoxidation catalyzed by M1/POM SACs were studied using density functional theory (DFT) calculations. The calculations demonstrate that the most probable anchoring sties for the isolated single atoms studied here in the M1/POM SACs are the fourfold hollow sites on the surface of POM support. The bonding interaction between single metal atom and surface of POM support comes from the molecular orbitals with a mixture of d atomic orbital of metal and 2p group orbital of surface oxygen atoms of POM cage. The calculated adsorption energy of isolated metal atoms in these M1/POM SACs indicates that the early transition metals (Cu and Zn) have high thermal stability. The DFT-derived IR spectra show that the four characteristic peaks of free Keggin-type POM structure split into six because of introduction of isolated metal atom. Compared with other metal atoms, the Zn1/POM SAC has the high reactivity for activity of dioxygen molecule, because the dioxygen moiety in Zn1/POM SAC displays O2-· radical feature with [POM4-·Zn2+O2-·]3- configuration. Finally, a catalytic cycle for ethylene epoxidation by O2 catalyzed by Zn1/POM SAC was proposed based on our DFT calculations. Supported noble-metal SACs are among the most important catalysts currently. However, noble metals are expensive and of limited supply. Development of non-noble-metal SACs is of essential importance. Therefore, the reported Zn1/POM SAC would be very useful to guide the search for SACs into non-noble metals.

18.
J Mol Graph Model ; 73: 8-17, 2017 05.
Article in English | MEDLINE | ID: mdl-28209538

ABSTRACT

Although epoxidation of alkenes by N2O catalyzed by Mn-substituted polyoxometalates (POMs) has been studied both experimental and theoretical methods, a complete catalytic cycle has not been established currently. In the present paper, density functional theory (DFT) calculations were employed to explore possible reaction mechanism about this catalytic cycle. Our DFT studies reveal that the reaction pathway starts from a low-valent Keggin-type POM aquametal derivative [PW11O39MnIIIH2O]4-. In the presence of N2O pressure, the formation of the active catalytic species [PW11O39MnVO]4- involves a ligand-substituted reaction about replacement of the aqua ligand with N2O to generation of POM/N2O adduct [PW11O39MnIIION2]4- and dissociation of N2 from this adduct. The calculated free energy indicates that the ligand-substituted reaction is endergonic both in gas phase or various solvents. The partial optimization method reveals that the dissociation of N2 from [PW11O39MnIIION2]4- involves crossing of the quintet state with a low-lying triplet state. Due to the high reactivity, the high-valent MnV-oxo species, [PW11O39MnVO]4-, may react with the excess N2O and alkenes. Thus, two alternative reaction pathways corresponding to activation of N2O and epoxidation of alkenes have been considered in this work. The calculated free energy profile indicates that epoxidation of alkenes pathway is the favorable routes. Finally, a complete catalytic cycle for this reaction has been proposed. The rate-determining step in this catalytic cycle is the dissociation of N2 from the low-valent POM/N2O adduct according to our DFT-M06L calculations.


Subject(s)
Alkenes/chemistry , Epoxy Compounds/chemistry , Manganese/chemistry , Nitrous Oxide/chemistry , Tungsten Compounds/chemistry , Catalysis , Kinetics , Ligands , Thermodynamics
19.
J Mol Model ; 22(1): 21, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26733484

ABSTRACT

The similar molecules [2.2]paracyclophane (22PCP) and 1,1,2,2,9,9,10,10-octafluoro[2.2]paracyclophane (8F22PCP) have both generated considerable synthetic interest since they were first prepared. In this work, the nonlinear optical properties of 22PCP, 8F22PCP, and the related Li-doped systems 22PCP-Li and 8F22PCP-Li (which have a Li atom above 22PCP and 8F22PCP, respectively) were investigated. An analysis of natural bond orbital charges showed that there is greater charge transfer from the Li atom to the benzene rings in 8F22PCP-Li than in 22PCP-Li. The variation in the calculated nucleus independent chemical shift (NICS) value as a function of the distance from the lower benzene ring towards the upper benzene ring was found to be W-shaped for both 22PCP and 22PCP-Li. Moreover, whereas all of the NICS values of 22PCP and 22PCP-Li were markedly negative, all of the NICS values of 8F22PCP and 8F22PCP-Li were either positive or only moderately negative. Calculations of the electro-optical properties of these systems showed that the first hyperpolarizability of 22PCP-Li was noticeably larger than that of 8F22PCP-Li. According to the two-level model, the larger first hyperpolarizability of 22PCP-Li is due to its smaller transition energy.


Subject(s)
Lithium/chemistry , Models, Chemical , Polycyclic Compounds/chemistry , Optics and Photonics
20.
J Mol Model ; 21(12): 315, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26589408

ABSTRACT

A series of hexaphyrins with different meso-carbon atoms and their protonated structures were investigated using density functional theory (DFT) and time-dependent DFT. Frontier molecular orbitals (FMOs), aromaticity, and electronic spectra were investigated systematically before and after protonation. The FMO energy gaps before and after protonation were different for the antiaromatic molecules, while they were only slightly different for the aromatic molecules. By analyzing the electronic spectra of the aromatic molecules, the absorption peaks in the Q-like and B-like bands were not significantly different before and after protonation. However, the absorption peaks of the antiaromatic molecules were clearly different before and after protonation in both the Q-like and B-like bands. [24]Hexaphyrin (1.0.1.0.1.0) has 24 π-electrons and is Hückel antiaromatic. However, the absorption spectrum of protonated [24]hexaphyrin (1.0.1.0.1.0) showed aromaticity. In addition, these conclusions were generally consistent with the FMOs, nucleus-independent chemical shifts, harmonic oscillator model of aromaticity, and absorption spectra. Although protonated [24]hexaphyrin (1.0.1.0.1.0) has 24 π-electrons and is Hückel antiaromatic, it has Möbius aromaticity because of the single-sided Möbius topological structure. This explains why [24]hexaphyrin (1.0.1.0.1.0) has diatropic ring currents in solvent. To the best of our knowledge, this system is the smallest Möbius aromatic molecule among the many uncoordinated extended porphyrins.

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