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J Struct Funct Genomics ; 9(1-4): 41-9, 2008 Dec.
Article in English | MEDLINE | ID: mdl-19039680

ABSTRACT

The structure of the 142-residue protein Q8ZP25_SALTY encoded in the genome of Salmonella typhimurium LT2 was determined independently by NMR and X-ray crystallography, and the structure of the 140-residue protein HYAE_ECOLI encoded in the genome of Escherichia coli was determined by NMR. The two proteins belong to Pfam (Finn et al. 34:D247-D251, 2006) PF07449, which currently comprises 50 members, and belongs itself to the 'thioredoxin-like clan'. However, protein HYAE_ECOLI and the other proteins of Pfam PF07449 do not contain the canonical Cys-X-X-Cys active site sequence motif of thioredoxin. Protein HYAE_ECOLI was previously classified as a [NiFe] hydrogenase-1 specific chaperone interacting with the twin-arginine translocation (Tat) signal peptide. The structures presented here exhibit the expected thioredoxin-like fold and support the view that members of Pfam family PF07449 specifically interact with Tat signal peptides.


Subject(s)
Escherichia coli/genetics , Molecular Chaperones/genetics , Salmonella typhimurium/genetics , Thioredoxins/genetics , Amino Acid Sequence , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Catalytic Domain , Escherichia coli Proteins/chemistry , Escherichia coli Proteins/genetics , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Chaperones/chemistry , Molecular Chaperones/metabolism , Molecular Sequence Data , Protein Conformation , Salmonella typhimurium/metabolism , Sequence Alignment , Sequence Homology, Amino Acid
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