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1.
Mol Phylogenet Evol ; 49(1): 318-26, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18723097

ABSTRACT

The phylogenetic relationships among 46 samples from 27 populations of the Japanese giant salamander, Andriasjaponicus and its congener, A. davidianus from China was investigated, using 3664 bp sequences of the mitochondrial genes NADH1, NADH3, cyt b and CR, partial NADH6 and intervening genes. In phylogenetic trees constructed by MP, ML, and Bayesian methods, the family Cryptobranchidae and the genus Andrias both form monophyletic groups. Japanese A. japonicus and Chinese A. davidianus are sister taxa and can be regarded as separate species despite a small degree of genetic differentiation. Andriasjaponicus is divided into central and western clades, but the phylogenetic relationships within the latter clade are unresolved. As previously reported from allozyme analyses, A. japonicus exhibits little genetic differentiation, in strong contrast to salamanders of the genus Hynobius with which their distributions overlap. This reduced genetic variability in A. japonicus is attributable to a unique mating system of polygyny, delayed sexual maturity, notable longevity, life in a stable aquatic environment, and gigantism, as well as bottleneck effects following habitat fragmentation and extinction of local populations during Quaternary glaciations. The species is thus susceptible to extinction by potential environmental fluctuations, and requires extensive conservation measures.


Subject(s)
Evolution, Molecular , Genetic Variation , Urodela/classification , Urodela/genetics , Animals , Bayes Theorem , Conservation of Natural Resources , DNA, Mitochondrial/genetics , Ecosystem , Genes, Mitochondrial , Haplotypes , Likelihood Functions , Mitochondria/genetics , Phylogeny , Sequence Analysis, DNA , Species Specificity
2.
Mol Phylogenet Evol ; 38(3): 659-66, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16403658

ABSTRACT

We investigated the phylogenetic relationships among 20 species of Oriental torrent frogs in the genus Amolops and its allies from China and Southeast Asia based on 1346-bp sequences of the mitochondrial 12S and 16S rRNA genes. Oriental species of the tribe Ranini form a monophyletic group containing 11 clades (Rana temporaria + Pseudoamolops, R. chalconota, four clades of Amolops, Meristogenys, three clades of Huia species, and Staurois) for which the phylogenetic relationships are unresolved. The genus Amolops consists of southern Chinese, southwestern Chinese, Thai, and Vietnamese-Malaysian lineages, but their relationships are also unresolved. The separation of southern and southwestern lineages within China conforms to previous morphological and karyological results. Species of Huia do not form a monophyletic group, whereas those of Meristogenys are monophyletic. Because P. sauteri is a sister species of R. temporaria, distinct generic status of Pseudoamolops is unwarranted.


Subject(s)
Ranidae/classification , Animals , Polymerase Chain Reaction , RNA, Ribosomal, 16S/genetics , Ranidae/genetics , Sequence Analysis, DNA , Species Specificity
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