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1.
Front Robot AI ; 10: 1234767, 2023.
Article in English | MEDLINE | ID: mdl-37711593

ABSTRACT

Smart speakers and conversational agents have been accepted into our homes for a number of tasks such as playing music, interfacing with the internet of things, and more recently, general chit-chat. However, they have been less readily accepted in our workplaces. This may be due to data privacy and security concerns that exist with commercially available smart speakers. However, one of the reasons for this may be that a smart speaker is simply too abstract and does not portray the social cues associated with a trustworthy work colleague. Here, we present an in-depth mixed method study, in which we investigate this question of embodiment in a serious task-based work scenario of a first responder team. We explore the concepts of trust, engagement, cognitive load, and human performance using a humanoid head style robot, a commercially available smart speaker, and a specially developed dialogue manager. Studying the effect of embodiment on trust, being a highly subjective and multi-faceted phenomena, is clearly challenging, and our results indicate that potentially, the robot, with its anthropomorphic facial features, expressions, and eye gaze, was trusted more than the smart speaker. In addition, we found that embodying a conversational agent helped increase task engagement and performance compared to the smart speaker. This study indicates that embodiment could potentially be useful for transitioning conversational agents into the workplace, and further in situ, "in the wild" experiments with domain workers could be conducted to confirm this.

2.
Comput Math Methods Med ; 2022: 4914727, 2022.
Article in English | MEDLINE | ID: mdl-35602340

ABSTRACT

Disused osteoporosis is a kind of osteoporosis, a common age-related disease. Neurological disorders are major risk factors for osteoporosis. Though there are many studies on disuse osteoporosis, the genetic mechanisms for the association between glutathione metabolism and ferroptosis in osteoblasts with disuse osteoporosis are still unclear. The purpose of this study is to explore the key genes and other related mechanism of ferroptosis and glutathione metabolism in osteoblast differentiation and disuse osteoporosis. By weighted gene coexpression network analysis (WGCNA), the process of osteoblast differentiation-related genes was studied in GSE30393. And the related functional pathways were found through the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. By combining GSE1367 and GSE100933 together, key genes which were separately bound up with glutathione metabolism and ferroptosis were located. The correlation of these key genes was analyzed by the Pearson correlation coefficient. GSTM1 targeted agonist glutathione (GSH) selected by connectivity map (CMap) analysis was used to interfere with the molding disused osteoporosis process in MC3T3-E1 cells. RT-PCR and intracellular reactive oxygen species (ROS) were performed. Two important pathways, glutathione metabolism and ferroptosis pathways, were found. GSTM1 and TFRC were thought as key genes in disuse osteoporosis osteoblasts with the two mechanisms. The two genes have a strong negative correlation. Our experiment results showed that the expression of TFRC was consistent with the negative correlation with the activation process of GSTM1. The strong relationship between the two genes was proved. Glutathione metabolism and ferroptosis are important in the normal differentiation of osteoblasts and the process of disuse osteoporosis. GSTM1 and TFRC were the key genes. The two genes interact with each other, which can be seen as a bridge between the two pathways. The two genes participate in the process of reducing ROS in disuse osteoporosis osteoblasts.


Subject(s)
Ferroptosis , Osteoporosis , Ferroptosis/genetics , Glutathione/metabolism , Humans , Osteoblasts/metabolism , Osteoporosis/genetics , Reactive Oxygen Species/metabolism
4.
Food Chem ; 211: 206-14, 2016 Nov 15.
Article in English | MEDLINE | ID: mdl-27283624

ABSTRACT

Coffee beans from the same origin were roasted using six time-temperature profiles, in order to identify volatile aroma compounds associated with five common roast coffee defects (light, scorched, dark, baked and underdeveloped). Thirty-seven volatile aroma compounds were selected on the basis that they had previously been identified as potent odorants of coffee and were also identified in all coffee brew preparations; the relative abundance of these aroma compounds was then evaluated using gas chromatography mass spectrometry (GC-MS) with headspace solid phase micro extraction. Some of the 37 key aroma compounds were significantly changed in each coffee roast defect and changes in one marker compound was chosen for each defect type, that is, indole for light defect, 4-ethyl-2-methoxyphenol for scorched defect, phenol for dark defect, maltol for baked defect and 2,5-dimethylfuran for underdeveloped defect. The association of specific changes in aroma profiles for different roast defects has not been shown previously and could be incorporated into screening tools to enable the coffee industry quickly identify if roast defects occur during production.


Subject(s)
Coffee/chemistry , Food Analysis/methods , Furans/analysis , Guaiacol/analysis , Volatile Organic Compounds/analysis , Gas Chromatography-Mass Spectrometry , Indoles/analysis , Phenol/analysis , Principal Component Analysis , Pyrones/analysis , Quality Control , Temperature
5.
J Biol Chem ; 288(26): 19184-96, 2013 Jun 28.
Article in English | MEDLINE | ID: mdl-23661703

ABSTRACT

Nucleosomes containing the specific histone H3 variant CENP-A mark the centromere locus on each chromatin and initiate kinetochore assembly. For the common type of regional centromeres, little is known in molecular detail of centromeric chromatin organization, its propagation through cell division, and how distinct organization patterns may facilitate kinetochore assembly. Here, we show that in the fission yeast S. pombe, a relatively small number of CENP-A/Cnp1 nucleosomes are found within the centromeric core and that their positioning relative to underlying DNA varies among genetically homogenous cells. Consistent with the flexible positioning of Cnp1 nucleosomes, a large portion of the endogenous centromere is dispensable for its essential activity in mediating chromosome segregation. We present biochemical evidence that Cnp1 occupancy directly correlates with silencing of the underlying reporter genes. Furthermore, using a newly developed pedigree analysis assay, we demonstrated the epigenetic inheritance of Cnp1 positioning and quantified the rate of occasional repositioning of Cnp1 nucleosomes throughout cell generations. Together, our results reveal the plasticity and the epigenetically inheritable nature of centromeric chromatin organization.


Subject(s)
Autoantigens/metabolism , Chromosomal Proteins, Non-Histone/metabolism , Epigenesis, Genetic , Fungal Proteins/metabolism , Gene Expression Regulation, Fungal , Nucleosomes/metabolism , Schizosaccharomyces/genetics , Autoantigens/genetics , Centromere/ultrastructure , Centromere Protein A , Chromatin/metabolism , Chromosomal Proteins, Non-Histone/genetics , Fungal Proteins/genetics , Gene Silencing , Genes, Reporter , High-Throughput Nucleotide Sequencing , Histones/metabolism , Kinetochores , Models, Genetic , Schizosaccharomyces/metabolism
6.
Mol Cell ; 33(3): 299-311, 2009 Feb 13.
Article in English | MEDLINE | ID: mdl-19217404

ABSTRACT

The mechanisms ensuring specific incorporation of CENP-A at centromeres are poorly understood. Mis16 and Mis18 are required for CENP-A localization at centromeres and form a complex that is conserved from fission yeast to human. Fission yeast sim1 mutants that alleviate kinetochore domain silencing are defective in Scm3(Sp), the ortholog of budding yeast Scm3(Sc). Scm3(Sp) depends on Mis16/18 for its centromere localization and like them is recruited to centromeres in late anaphase. Importantly, Scm3(Sp) coaffinity purifies with CENP-A(Cnp1) and associates with CENP-A(Cnp1) in vitro, yet localizes independently of intact CENP-A(Cnp1) chromatin and is differentially released from chromatin. While Scm3(Sc) has been proposed to form a unique hexameric nucleosome with CENP-A(Cse4) and histone H4 at budding yeast point centromeres, we favor a model in which Scm3(Sp) acts as a CENP-A(Cnp1) receptor/assembly factor, cooperating with Mis16 and Mis18 to receive CENP-A(Cnp1) from the Sim3 escort and mediate assembly of CENP-A(Cnp1) into subkinetochore chromatin.


Subject(s)
Carrier Proteins/metabolism , Chromatin/metabolism , Chromosomal Proteins, Non-Histone/metabolism , Kinetochores/metabolism , Schizosaccharomyces pombe Proteins/metabolism , Schizosaccharomyces/metabolism , Carrier Proteins/genetics , Cell Cycle , Cell Cycle Proteins/metabolism , Chromosomal Proteins, Non-Histone/analysis , Mutation , Schizosaccharomyces/genetics , Schizosaccharomyces pombe Proteins/analysis , Schizosaccharomyces pombe Proteins/genetics
7.
J Cell Biol ; 181(4): 587-94, 2008 May 19.
Article in English | MEDLINE | ID: mdl-18474626

ABSTRACT

Point and regional centromeres specify a unique site on each chromosome for kinetochore assembly. The point centromere in budding yeast is a unique 150-bp DNA sequence, which supports a kinetochore with only one microtubule attachment. In contrast, regional centromeres are complex in architecture, can be up to 5 Mb in length, and typically support many kinetochore-microtubule attachments. We used quantitative fluorescence microscopy to count the number of core structural kinetochore protein complexes at the regional centromeres in fission yeast and Candida albicans. We find that the number of CENP-A nucleosomes at these centromeres reflects the number of kinetochore-microtubule attachments instead of their length. The numbers of kinetochore protein complexes per microtubule attachment are nearly identical to the numbers in a budding yeast kinetochore. These findings reveal that kinetochores with multiple microtubule attachments are mainly built by repeating a conserved structural subunit that is equivalent to a single microtubule attachment site.


Subject(s)
Candida albicans/cytology , Kinetochores/metabolism , Microtubules/metabolism , Schizosaccharomyces/cytology , Autoantigens/metabolism , Centromere Protein A , Chromosomal Proteins, Non-Histone/metabolism , DNA, Fungal/metabolism , Fluorescence , G2 Phase , Metaphase , Saccharomyces cerevisiae/cytology , Schizosaccharomyces pombe Proteins
8.
Genome Res ; 18(7): 1064-72, 2008 Jul.
Article in English | MEDLINE | ID: mdl-18411404

ABSTRACT

A key element for defining the centromere identity is the incorporation of a specific histone H3, CENPA, known as Cnp1p in Schizosaccharomyces pombe. Previous studies have suggested that functional S. pombe centromeres lack regularly positioned nucleosomes and may involve chromatin remodeling as a key step of kinetochore assembly. We used tiling microarrays to show that nucleosomes are, in fact, positioned in regular intervals in the core of centromere 2, providing the first high-resolution map of regional centromere chromatin. Nucleosome locations are not disrupted by mutations in kinetochore protein genes cnp1, mis18, mis12, nuf2, mal2; overexpression of cnp1; or the deletion of ams2, which encodes a GATA-like factor participating in CENPA incorporation. Bioinformatics analysis of the centromere sequence indicates certain enriched motifs in linker regions between nucleosomes and reveals a sequence bias in nucleosome positioning. In addition, sequence analysis of nucleosome-free regions identifies novel binding sites of Ams2p. We conclude that centromeric nucleosome positions are stable and may be derived from the underlying DNA sequence.


Subject(s)
Centromere/genetics , Chromosome Mapping , Chromosomes, Fungal/genetics , Nucleosomes/genetics , Schizosaccharomyces/genetics , DNA, Fungal/analysis , DNA, Fungal/genetics
9.
EMBO J ; 24(16): 2919-30, 2005 Aug 17.
Article in English | MEDLINE | ID: mdl-16079914

ABSTRACT

Kinetochore composition and structure are critical for understanding how kinetochores of different types perform similar functions in chromosome segregation. We used affinity purification to investigate the kinetochore composition and assembly in Schizosaccharomyces pombe. We identified a conserved DASH complex that functions to ensure precise chromosome segregation. Unlike DASH in budding yeast that is localized onto kinetochores throughout the cell cycle, SpDASH is localized onto kinetochores only in mitosis. We also identified two independent groups of kinetochore components, one of which, the Sim4 complex, contains several novel Fta proteins in addition to known kinetochore components. DASH is likely to be associated with the Sim4 complex via Dad1 protein. The other group, Ndc80-MIND-Spc7 complex, contains the conserved Ndc80 and MIND complexes and Spc7 protein. We propose that fission yeast kinetochore is comprised of at least two major structural motifs that are biochemically separable. Our results suggest a high degree of conservation between the kinetochores of budding yeast and fission yeast even though many individual protein subunits do not have a high degree of sequence similarity.


Subject(s)
Chromosome Segregation/genetics , Kinetochores/chemistry , Kinetochores/metabolism , Microtubule-Associated Proteins/metabolism , Mitosis/physiology , Multiprotein Complexes/metabolism , Amino Acid Sequence , Blotting, Western , Chromatin Immunoprecipitation , Chromosome Segregation/physiology , Conserved Sequence/genetics , Green Fluorescent Proteins , Mass Spectrometry , Microscopy, Fluorescence , Molecular Sequence Data , Multiprotein Complexes/genetics , Schizosaccharomyces
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