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1.
J Voice ; 2024 Aug 06.
Article in English | MEDLINE | ID: mdl-39107210

ABSTRACT

PURPOSE: Acoustic lie detection, prized for its covert nature and capability for remote processing, has spurred growing interest in acoustic features that can reliably aid in lie detection. In this study, the aim was to construct an acoustic polygraph based on a variety of phonetic and acoustic features rather than on electrodermal, cardiovascular, and respiratory values. METHODS: Sixty-two participants from the University of Science and Technology of China, aged 18-30 years old, were involved in the mock crime experiment and were randomly assigned to the innocent and guilty groups. We collected 31 deceptive and truthful audios to analyze the performance of voice onset time (VOT) in lie detection. RESULTS: Our findings revealed that VOT performed well in lie detection. Both the average sensitivity and specificity of the area under the curve are 0.888, and its lower and upper confidence limit are up to 0.803 and 0.973 respectively at the 95% confidence level. Although the other acoustic features had a lower reference value, they also provided a general trend in the judgment of lie detection. CONCLUSIONS: Our results suggested that some acoustic features can be effectively used as aids to lie detection. Through a similar approach, we will explore more acoustic and phonetic features that contribute to detecting lies in the future.

2.
Adv Mater ; : e2409440, 2024 Aug 06.
Article in English | MEDLINE | ID: mdl-39108037

ABSTRACT

Triboelectric nanogenerators (TENGs) play a crucial role in attaining sustainable energy for various wearable devices. Polymer materials are essential components of TENGs. Biopolymers are suitable materials for TENGs because of their degradability, natural sourcing, and cost-effectiveness. Herein, the latest progress in commonly used biopolymers and well-designed biomimetic techniques for TENG is summarized. The applications of natural rubber, polysaccharides, protein-based biopolymers, and other common synthetic biopolymers in TENG technology are summarized in detail. Each biopolymer is discussed based on its electrification capability, polarity variations, and specific functionalities as active and functional layers of TENGs. Important biomimetic strategies and related applications of specific biopolymers are also summarized to guide the structural and functional design of TENG. In the future, the study of triboelectric biopolymers may focus on exploring alternative candidates, enhancing charge density, and expanding functionality. Various possible applications of biopolymer-based TENGs are proposed in this review. By applying biopolymers and related biomimetic methods to TENG devices, the applications of TENG in the fields of healthcare, environmental monitoring, and wearable/implantable electronics can be further promoted.

4.
J Voice ; 2024 Jun 17.
Article in English | MEDLINE | ID: mdl-38890016

ABSTRACT

PURPOSE: This research aims to identify acoustic features which can distinguish patients with Parkinson's disease (PD patients) and healthy speakers. METHODS: Thirty PD patients and 30 healthy speakers were recruited in the experiment, and their speech was collected, including three vowels (/i/, /a/, and /u/) and nine consonants (/p/, /pÊ°/, /t/, /tÊ°/, /k/, /kÊ°/, /l/, /m/, and /n/). Acoustic features like fundamental frequency (F0), Jitter, Shimmer, harmonics-to-noise ratio (HNR), first formant (F1), second formant (F2), third formant (F3), first bandwidth (B1), second bandwidth (B2), third bandwidth (B3), voice onset, voice onset time were analyzed in our experiment. Two-sample independent t test and the nonparametric Mann-Whitney U (MWU) test were carried out alternatively to compare the acoustic measures between the PD patients and healthy speakers. In addition, after figuring out the effective acoustic features for distinguishing PD patients and healthy speakers, we adopted two methods to detect PD patients: (1) Built classifiers based on the effective acoustic features and (2) Trained support vector machine classifiers via the effective acoustic features. RESULTS: Significant differences were found between the male PD group and the male health control in vowel /i/ (Jitter and Shimmer) and /a/ (Shimmer and HNR). Among female subjects, significant differences were observed in F0 standard deviation (F0 SD) of /u/ between the two groups. Additionally, significant differences between PD group and health control were also found in the F3 of /i/ and /n/, whereas other acoustic features showed no significant differences between the two groups. The HNR of vowel /a/ performed the best classification accuracy compared with the other six acoustic features above found to distinguish PD patients and healthy speakers. CONCLUSIONS: PD can cause changes in the articulation and phonation of PD patients, wherein increases or decreases occur in some acoustic features. Therefore, the use of acoustic features to detect PD is expected to be a low-cost and large-scale diagnostic method.

5.
Small ; : e2403879, 2024 Jun 16.
Article in English | MEDLINE | ID: mdl-38881274

ABSTRACT

Ocean energy harvesting based on a triboelectric nanogenerator (TENG) has great application potential, while the encapsulation of triboelectric devices in water poses a critical issue. Herein, a triboelectric-electromagnetic hybrid nanogenerator (TE-HNG) consisting of TENGs and electromagnetic generators (EMGs) is proposed to harvest water flow energy. A magnetic coupling transmission component is applied to replace traditional bearing structures, which can realize the fully enclosed packaging of the TENG devices and achieve long-lasting energy harvesting from water flow. Under the intense water impact, magnetic coupling reduces the possibility of internal gear damage due to excessive torque, indicating superior stability and robustness compared to conventional TENG. At the waterwheel rotates speed of 75 rpm, the TE-HNG can generate an output peak power of 114.83 mW, corresponding to a peak power density of 37.105 W m-3. After 5 h of continuous operation, the electrical output attenuation of TENG is less than 3%, demonstrating excellent device durability. Moreover, a self-powered temperature sensing system and a self-powered cathodic protection system based on the TE-HNG are developed and illustrated. This work provides a prospective strategy for improving the output stability of TENGs, which benefits the practical applications of the TENGs in large-scale blue energy harvesting.

6.
RSC Adv ; 14(8): 5588-5593, 2024 Feb 07.
Article in English | MEDLINE | ID: mdl-38357037

ABSTRACT

Sodium (Na) metal batteries such as Na-ion batteries and Na-CO2 batteries are considered to be excellent alternatives to lithium batteries in terms of their potential applications because of their high specific capacity and low cost. However, the sodium anode showed low efficiency and poor cycling in Na-metal battery performance due to the formation of sodium dendrites and serious corrosion. In this work, nitrogen (N), phosphorus (P) co-doped carbon paper (NP-CP) modified with cobalt tetroxide (Co3O4) nanoparticles was prepared as the Na anode carrier (Co3O4@NP-CP), and a sodium-based composite anode (Na-Co@NP-CP) was further prepared by electrodepositing sodium. The experimental results indicate that the N, P and Co3O4 multi-doped carbon paper has good sodiophilicity, which can induce the uniform plating/stripping of Na+ ions and inhibit the growth of Na dendrites. The N, P doped carbon paper provides a high surface area and tremendous three-dimensional (3D) framework to effectively reduce the areal current density, facilitate the transfer of electrons, and enhance battery life. Therefore, Na-Co@NP-CP based symmetric cells exhibit stable cycling of over 1100 hours at current densities of 1 mA cm-2 and fixed capacity of 1 mA h cm-2. When the Na-Co@NP-CP anode couples with CO2, the assembled batteries can deliver a stable cycling of 165 cycles at current densities of 500 mA g-1 and limited capacity of 500 mA h g-1. When Na-Co@NP-CP anode couples with Na3V2(PO4)3 (NVP) cathode, the assembled cells exhibit lower hysteresis and batter cycling performance.

7.
Mol Cancer Res ; 22(6): 555-571, 2024 06 04.
Article in English | MEDLINE | ID: mdl-38393317

ABSTRACT

The p53 tumor suppressor protein, a sequence-specific DNA binding transcription factor, regulates the expression of a large number of genes, in response to various forms of cellular stress. Although the protein coding target genes of p53 have been well studied, less is known about its role in regulating long noncoding genes and their functional relevance to cancer. Here we report the genome-wide identification of a large set (>1,000) of long noncoding RNAs (lncRNA), which are putative p53 targets in a colon cancer cell line and in human patient datasets from five different common types of cancer. These lncRNAs have not been annotated by other studies of normal unstressed systems. In the colon cancer cell line, a high proportion of these lncRNAs are uniquely induced by different chemotherapeutic agents that activate p53, whereas others are induced by more than one agent tested. Further, subsets of these lncRNAs independently predict overall and disease-free survival of patients across the five different common cancer types. Interestingly, both genetic alterations and patient survival associated with different lncRNAs are unique to each cancer tested, indicating extraordinary tissue-specific variability in the p53 noncoding response. The newly identified noncoding p53 target genes have allowed us to construct a classifier for tumor diagnosis and prognosis. IMPLICATIONS: Our results not only identify myriad p53-regulated long noncoding (lncRNA), they also reveal marked drug-induced, as well as tissue- and tumor-specific heterogeneity in these putative p53 targets and our findings have enabled the construction of robust classifiers for diagnosis and prognosis.


Subject(s)
Neoplasms , RNA, Long Noncoding , Tumor Suppressor Protein p53 , Humans , RNA, Long Noncoding/genetics , Tumor Suppressor Protein p53/genetics , Tumor Suppressor Protein p53/metabolism , Neoplasms/genetics , Neoplasms/pathology , Cell Line, Tumor , Gene Expression Regulation, Neoplastic
8.
ACS Nano ; 18(5): 4467-4477, 2024 Feb 06.
Article in English | MEDLINE | ID: mdl-38263634

ABSTRACT

The energy conversion efficiency of a triboelectric nanogenerator (TENG) is severely limited by the charge density of triboelectric materials, while drastic and unavoidable charge decay happens during contact due to the insufficient charge retention capacity of positive triboelectric materials. Here, elaborately synthesized acid-ion-doped pyridine-based polybenzimidazole processing with strong charge retention capability is demonstrated to couple with negatively corona-polarized electrets. As illustrated by thermal stimulation and an ion mass spectrometer, the formation of acid-ion chimerism processes high activation energy for stored charges, and the selective anion migration can compensate the escape of polarized charge. Accordingly, the charge density can reach up to 596 µC m-2 and the charge retention rate reaches 49.7%, which is so far the highest intrinsic charge density obtained in the open air. Thus, the ionic chimerism strategy provides an effective way to suppress the charge escaping in the open air and gives a great expandable avenue for the material challenges of TENG's practical deployment.

9.
Genes Dev ; 37(21-24): 968-983, 2023 Dec 26.
Article in English | MEDLINE | ID: mdl-37977822

ABSTRACT

The spliceosomal gene SF3B1 is frequently mutated in cancer. While it is known that SF3B1 hotspot mutations lead to loss of splicing factor SUGP1 from spliceosomes, the cancer-relevant SF3B1-SUGP1 interaction has not been characterized. To address this issue, we show by structural modeling that two regions flanking the SUGP1 G-patch make numerous contacts with the region of SF3B1 harboring hotspot mutations. Experiments confirmed that all the cancer-associated mutations in these regions, as well as mutations affecting other residues in the SF3B1-SUGP1 interface, not only weaken or disrupt the interaction but also alter splicing similarly to SF3B1 cancer mutations. Finally, structural modeling of a trimeric protein complex reveals that the SF3B1-SUGP1 interaction "loops out" the G-patch for interaction with the helicase DHX15. Our study thus provides an unprecedented molecular view of a protein complex essential for accurate splicing and also reveals that numerous cancer-associated mutations disrupt the critical SF3B1-SUGP1 interaction.


Subject(s)
Neoplasms , Spliceosomes , Humans , RNA, Messenger/metabolism , Spliceosomes/genetics , Spliceosomes/metabolism , RNA Splicing Factors/chemistry , RNA Splicing/genetics , Neoplasms/genetics , Neoplasms/metabolism , Mutation , Phosphoproteins/metabolism
10.
Sci Transl Med ; 15(716): eadh4181, 2023 10 04.
Article in English | MEDLINE | ID: mdl-37792958

ABSTRACT

Clonal evolution drives cancer progression and therapeutic resistance. Recent studies have revealed divergent longitudinal trajectories in gliomas, but early molecular features steering posttreatment cancer evolution remain unclear. Here, we collected sequencing and clinical data of initial-recurrent tumor pairs from 544 adult diffuse gliomas and performed multivariate analysis to identify early molecular predictors of tumor evolution in three diffuse glioma subtypes. We found that CDKN2A deletion at initial diagnosis preceded tumor necrosis and microvascular proliferation that occur at later stages of IDH-mutant glioma. Ki67 expression at diagnosis was positively correlated with acquiring hypermutation at recurrence in the IDH-wild-type glioma. In all glioma subtypes, MYC gain or MYC-target activation at diagnosis was associated with treatment-induced hypermutation at recurrence. To predict glioma evolution, we constructed CELLO2 (Cancer EvoLution for LOngitudinal data version 2), a machine learning model integrating features at diagnosis to forecast hypermutation and progression after treatment. CELLO2 successfully stratified patients into subgroups with distinct prognoses and identified a high-risk patient group featured by MYC gain with worse post-progression survival, from the low-grade IDH-mutant-noncodel subtype. We then performed chronic temozolomide-induction experiments in glioma cell lines and isogenic patient-derived gliomaspheres and demonstrated that MYC drives temozolomide resistance by promoting hypermutation. Mechanistically, we demonstrated that, by binding to open chromatin and transcriptionally active genomic regions, c-MYC increases the vulnerability of key mismatch repair genes to treatment-induced mutagenesis, thus triggering hypermutation. This study reveals early predictors of cancer evolution under therapy and provides a resource for precision oncology targeting cancer dynamics in diffuse gliomas.


Subject(s)
Brain Neoplasms , Glioma , Adult , Humans , Brain Neoplasms/therapy , Temozolomide/pharmacology , Temozolomide/therapeutic use , Mutation/genetics , Precision Medicine , Neoplasm Recurrence, Local/drug therapy , Glioma/drug therapy
11.
Front Cell Dev Biol ; 11: 1232146, 2023.
Article in English | MEDLINE | ID: mdl-37635865

ABSTRACT

Tumor immunotherapy has made great progress in cancer treatment but still faces several challenges, such as a limited number of targetable antigens and varying responses among patients. Alternative splicing (AS) is an essential process for the maturation of nearly all mammalian mRNAs. Recent studies show that AS contributes to expanding cancer-specific antigens and modulating immunogenicity, making it a promising solution to the above challenges. The organoid technology preserves the individual immune microenvironment and reduces the time/economic costs of the experiment model, facilitating the development of splicing-based immunotherapy. Here, we summarize three critical roles of AS in immunotherapy: resources for generating neoantigens, targets for immune-therapeutic modulation, and biomarkers to guide immunotherapy options. Subsequently, we highlight the benefits of adopting organoids to develop AS-based immunotherapies. Finally, we discuss the current challenges in studying AS-based immunotherapy in terms of existing bioinformatics algorithms and biological technologies.

12.
BMC Public Health ; 23(1): 1260, 2023 06 28.
Article in English | MEDLINE | ID: mdl-37380964

ABSTRACT

BACKGROUND: This study was conducted to assess the association of serum 25-hydroxyvitamin D [25(OH)D] concentrations with all-cause and cardiovascular disease (CVD) mortality in older people with chronic kidney disease (CKD) in the United States. METHODS: We identified 3230 CKD participants aged ≥ 60 years from the National Health and Nutrition Examination Survey (2001-2018). CKD was defined as an estimated glomerular filtration rate (eGFR) < 60 ml/min/1.73 m2. Mortality outcomes were determined by linkage to National Death Index (NDI) records through December 31, 2019. Restricted cubic spline based on Cox regression models were utilized to elucidate the nonlinear relationship between serum 25(OH)D concentrations and mortality in patients with CKD. RESULTS: During median 74 months of follow-up, 1615 all-cause death and 580 CVD death were recorded. We found an L-shaped association between serum 25(OH)D concentrations and all-cause and CVD mortality, reaching a plateau at 90 nmol/L. Accordingly, per one-unit increment in natural log-transformed 25(OH)D was associated with a 32% and 33% reduced risk of all-cause mortality (hazard ratio [HR] 0.68; 95%CI, 0.56 to 0.83) and CV mortality (HR 0.69; 95%CI, 0.49 to 0.97) in participants with serum 25(OH)D < 90 nmol/L, but no considerable difference was observed in participants with serum 25(OH)D ≥ 90 nmol/L. Compared with those in the deficiency group (< 50 nmol/L), insufficient (50 to < 75 nmol/L) and sufficient group (≥ 75 nmol/L) were significantly associated with lower all-cause mortality (HR,0.83; 95%CI, 0.71 to 0.97 and HR, 0.75; 95%CI, 0.64 to 0.89) and CV mortality (HR,0.87; 95%CI, 0.68 to 1.10 and HR, 0.77; 95%CI, 0.59 to < 1.0), respectively. CONCLUSION: An L-shaped relationship between serum 25(OH)D levels with all-cause and CVD mortality was observed in elderly CKD patients in the United States. A 25(OH)D concentration of 90 nmol/L may be the target to reduce the risk of premature death.


Subject(s)
Cardiovascular Diseases , Renal Insufficiency, Chronic , Aged , Humans , Nutrition Surveys , Prospective Studies
13.
Nat Commun ; 14(1): 3315, 2023 06 07.
Article in English | MEDLINE | ID: mdl-37286541

ABSTRACT

Eye tracking provides valuable insight for analyzing visual attention and underlying thinking progress through the observation of eye movements. Here, a transparent, flexible and ultra-persistent electrostatic sensing interface is proposed for realizing active eye tracking (AET) system based on the electrostatic induction effect. Through a triple-layer structure combined with a dielectric bilayer and a rough-surface Ag nanowire (Ag NW) electrode layer, the inherent capacitance and interfacial trapping density of the electrostatic interface has been strongly enhanced, contributing to an unprecedented charge storage capability. The electrostatic charge density of the interface reached 1671.10 µC·m-2 with a charge-keeping rate of 96.91% after 1000 non-contact operation cycles, which can finally realize oculogyric detection with an angular resolution of 5°. Thus, the AET system enables real-time decoding eye movements for customer preference recording and eye-controlled human-computer interaction, supporting its limitless potentiality in commercial purpose, virtual reality, human computer interactions and medical monitoring.


Subject(s)
Eye Movements , Eye-Tracking Technology , Humans , Static Electricity , Electrodes
14.
Protein Cell ; 14(5): 315-317, 2023 May.
Article in English | MEDLINE | ID: mdl-37168456
15.
Nanoscale ; 15(14): 6709-6721, 2023 Apr 06.
Article in English | MEDLINE | ID: mdl-36938843

ABSTRACT

Efficient removal of air pollution caused by volatile organic compounds (VOCs) and particulate matter (PM) through distributed energy collected from the environment is an effective strategy to achieve both energy conservation and better air quality. Herein, a curtain purification system based on a rabbit fur-based rotary triboelectric nanogenerator (RR-TENG) and a collaborative photocatalysis technology was designed for indoor air purification. The high electrostatic field from RR-TENG enhances formaldehyde adsorption, while it can also efficiently adsorb PM2.5 simultaneously. More interestingly, the ultrahigh electric field provided by RR-TENG promotes the separation of photogenerated electron-hole pairs of the g-C3N4/TiO2 composite photocatalyst, generating more superoxide radicals (⋅O2-), hydroxyl radicals (⋅OH), and holes (h+) and thereby improving the photocatalytic efficiency. In a simulated reaction chamber of 9 L, the formaldehyde removal rate of the system can reach 79.2% within 90 min and RR-TENG rapidly reduces PM2.5 from 999 µg m-3 to 50 µg m-3 within 60 s. This study proposes a curtain purification system integrating the function of energy collection and photocatalytic purification, which can be applied for improving air quality and human health.

16.
Small Methods ; 7(6): e2201593, 2023 Jun.
Article in English | MEDLINE | ID: mdl-36895071

ABSTRACT

Regulating the ranking of polymer in triboelectric series over a wide range is of great help for material's selection of triboelectric nanogenerators (TENGs). Herein, fluorinated poly(phthalazinone ether)s (FPPEs) with tunable molecular structure and aggregate structure are synthesized by co-polycondensation, while the large positive ranking shift in the triboelectric series can be achieved by introducing phthalazinone moieties with strong electron donating capability. FPPE-5, which includes abundant phthalazinone moieties, is more positive than all of the previously reported triboelectric polymers. Hence, the regulating range of FPPEs in this work updates a new record in triboelectric series, which is wider than that of previous works. A peculiar crystallization behavior, capable of trapping and storing more electrons, has been observed in FPPE-2 with 25% phthalazinone moieties. Correspondingly, FPPE-2 is more negative than FPPE-1 without a phthalazinone moiety, which is an unexpected shift against the common changing tendency in triboelectric series. With FPPEs films as the probing material, a tactile TENG sensor is applied to enable material identification via electrical signal polarity. Hence, this study demonstrates a strategy to regulate the series of triboelectric polymers by copolymerization using monomers with distinct electrification capabilities, where both the monomer ratio and the peculiar nonlinear behavior can control triboelectric performance.

17.
Haematologica ; 108(8): 2029-2043, 2023 08 01.
Article in English | MEDLINE | ID: mdl-36861414

ABSTRACT

RNA-binding proteins (RBP) have emerged as essential regulators that control gene expression and modulate multiple cancer traits. T-cell acute lymphoblastic leukemia (T-ALL) is an aggressive hematologic malignancy derived from transformation of T-cell progenitors that normally undergo discrete steps of differentiation in the thymus. The implications of essential RBP during T-cell neoplastic transformation remain largely unclear. Systematic evaluation of RBP identifies RNA helicase DHX15, which facilitates the disassembly of the spliceosome and release of lariat introns, as a T-ALL dependency factor. Functional analysis using multiple murine T-ALL models demonstrates the essential importance of DHX15 in tumor cell survival and leukemogenesis. Moreover, single-cell transcriptomics reveals that DHX15 depletion in T-cell progenitors hinders burst proliferation during the transition from doublenegative to double-positive cells (CD4-CD8- to CD4+CD8+). Mechanistically, abrogation of DHX15 perturbs RNA splicing and leads to diminished levels of SLC7A6 and SLC38A5 transcripts due to intron retention, thereby suppressing glutamine import and mTORC1 activity. We further propose a DHX15 signature modulator drug ciclopirox and demonstrate that it has prominent anti-T-ALL efficacy. Collectively, our data highlight the functional contribution of DHX15 to leukemogenesis through regulation of established oncogenic pathways. These findings also suggest a promising therapeutic approach, i.e., splicing perturbation by targeting spliceosome disassembly, may achieve considerable anti-tumor efficacy.


Subject(s)
Leukemia , RNA Helicases , Humans , Animals , Mice , RNA Helicases/genetics , RNA Helicases/metabolism , RNA Splicing , Spliceosomes/genetics , Leukemia/metabolism , Amino Acid Transport Systems, Basic/genetics , Amino Acid Transport Systems, Basic/metabolism
18.
ACS Appl Mater Interfaces ; 15(13): 17009-17018, 2023 Apr 05.
Article in English | MEDLINE | ID: mdl-36947663

ABSTRACT

With the development of science and technology, human-machine interaction has brought great benefits to the society. Here, we design a voice and gesture signal translator (VGST), which can translate natural actions into electrical signals and realize efficient communication in human-machine interface. By spraying silk protein on the copper of the device, the VGST can achieve improved output and a wide frequency response of 20-2000 Hz with a high sensitivity of 167 mV/dB, and the resolution of frequency detection can reach 0.1 Hz. By designing its internal structure, its resonant frequency and output voltage can be adjusted. The VGST can be used as a high-fidelity platform to effectively recover recorded music and can also be combined with machine learning algorithms to realize the function of speech recognition with a high accuracy rate of 97%. It also has good antinoise performance to recognize speech correctly even in noisy environments. Meanwhile, in gesture recognition, the triboelectric translator is able to recognize simple hand gestures and to judge the distance between hand and the VGST based on the principle of electrostatic induction. This work demonstrates that triboelectric nanogenerator (TENG) technology can have great application prospects and significant advantages in human-machine interaction and high-fidelity platforms.


Subject(s)
Gestures , Voice , Humans , Speech , Algorithms , Machine Learning
20.
Nucleic Acids Res ; 51(D1): D1196-D1204, 2023 01 06.
Article in English | MEDLINE | ID: mdl-36318242

ABSTRACT

Alternative splicing (AS) is a fundamental process that governs almost all aspects of cellular functions, and dysregulation in this process has been implicated in tumor initiation, progression and treatment resistance. With accumulating studies of carcinogenic mis-splicing in cancers, there is an urgent demand to integrate cancer-associated splicing changes to better understand their internal cross-talks and functional consequences from a global view. However, a resource of key functional AS events in human cancers is still lacking. To fill the gap, we developed ASCancer Atlas (https://ngdc.cncb.ac.cn/ascancer), a comprehensive knowledgebase of aberrant splicing in human cancers. Compared to extant databases, ASCancer Atlas features a high-confidence collection of 2006 cancer-associated splicing events experimentally proved to promote tumorigenesis, a systematic splicing regulatory network, and a suit of multi-scale online analysis tools. For each event, we manually curated the functional axis including upstream splicing regulators, splicing event annotations, downstream oncogenic effects, and possible therapeutic strategies. ASCancer Atlas also houses about 2 million computationally putative splicing events. Additionally, a user-friendly web interface was built to enable users to easily browse, search, visualize, analyze, and download all splicing events. Overall, ASCancer Atlas provides a unique resource to study the functional roles of splicing dysregulation in human cancers.


Subject(s)
Alternative Splicing , Databases, Genetic , Neoplasms , Humans , Alternative Splicing/genetics , Databases, Factual , Neoplasms/genetics , RNA Splicing , Atlases as Topic
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