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1.
Nat Commun ; 10(1): 711, 2019 02 12.
Article in English | MEDLINE | ID: mdl-30755613

ABSTRACT

Adenosine 5' triphosphate (ATP) is a universal intracellular energy source and an evolutionarily ancient, ubiquitous extracellular signal in diverse species. Here, we report the generation and characterization of single-wavelength genetically encoded fluorescent sensors (iATPSnFRs) for imaging extracellular and cytosolic ATP from insertion of circularly permuted superfolder GFP into the epsilon subunit of F0F1-ATPase from Bacillus PS3. On the cell surface and within the cytosol, iATPSnFR1.0 responds to relevant ATP concentrations (30 µM to 3 mM) with fast increases in fluorescence. iATPSnFRs can be genetically targeted to specific cell types and sub-cellular compartments, imaged with standard light microscopes, do not respond to other nucleotides and nucleosides, and when fused with a red fluorescent protein function as ratiometric indicators. After careful consideration of their modest pH sensitivity, iATPSnFRs represent promising reagents for imaging ATP in the extracellular space and within cells during a variety of settings, and for further application-specific refinements.


Subject(s)
Adenosine Triphosphate/chemistry , Cell Membrane/chemistry , Cytosol/chemistry , Fluorescence Resonance Energy Transfer/methods , Proteins/metabolism , Adenosine Triphosphate/genetics , Bacillus/cytology , Bacillus/genetics , Bacillus/metabolism , Bacterial Proteins/genetics , Gene Expression , HEK293 Cells , Humans , Hydrogen-Ion Concentration , Image Processing, Computer-Assisted , Kinetics , Luminescent Proteins/genetics , Microscopy, Fluorescence , Models, Molecular , Mutagenesis, Site-Directed , Protein Conformation , Red Fluorescent Protein , ATPase Inhibitory Protein
2.
J Biol Chem ; 288(17): 12353-65, 2013 Apr 26.
Article in English | MEDLINE | ID: mdl-23486469

ABSTRACT

Fission and fusion events dynamically control the shape and function of mitochondria. The activity of the mitochondrial fission enzyme dynamin-related protein 1 (Drp1) is finely tuned by several post-translational modifications. Phosphorylation of Ser-656 by cAMP-dependent protein kinase (PKA) inhibits Drp1, whereas dephosphorylation by a mitochondrial protein phosphatase 2A isoform and the calcium-calmodulin-dependent phosphatase calcineurin (CaN) activates Drp1. Here, we identify a conserved CaN docking site on Drp1, an LXVP motif, which mediates the interaction between the phosphatase and mechanoenzyme. We mutated the LXVP motif in Drp1 to either increase or decrease similarity to the prototypical LXVP motif in the transcription factor NFAT, and assessed stability of the mutant Drp1-CaN complexes by affinity precipitation and isothermal titration calorimetry. Furthermore, we quantified effects of LXVP mutations on Drp1 dephosphorylation kinetics in vitro and in intact cells. With tools for bidirectional control of the CaN-Drp1 signaling axis in hand, we demonstrate that the Drp1 LXVP motif shapes mitochondria in neuronal and non-neuronal cells, and that CaN-mediated Drp1 dephosphorylation promotes neuronal death following oxygen-glucose deprivation. These results point to the CaN-Drp1 complex as a potential target for neuroprotective therapy of ischemic stroke.


Subject(s)
Brain Ischemia/metabolism , Dynamins/metabolism , Nerve Tissue Proteins/metabolism , Neurons/metabolism , Stroke/metabolism , Amino Acid Motifs , Animals , Brain Ischemia/genetics , Brain Ischemia/pathology , Calcineurin/genetics , Calcineurin/metabolism , Cell Death , Cyclic AMP-Dependent Protein Kinases/genetics , Cyclic AMP-Dependent Protein Kinases/metabolism , Dynamins/genetics , Mitochondrial Proteins/genetics , Mitochondrial Proteins/metabolism , NFATC Transcription Factors/genetics , NFATC Transcription Factors/metabolism , Nerve Tissue Proteins/genetics , Neurons/pathology , Phosphorylation/genetics , Protein Phosphatase 2/genetics , Protein Phosphatase 2/metabolism , Rats , Rats, Sprague-Dawley , Stroke/genetics , Stroke/pathology
3.
Neuron ; 74(2): 269-76, 2012 Apr 26.
Article in English | MEDLINE | ID: mdl-22542181

ABSTRACT

The 22 γ-protocadherins (γ-Pcdhs) potentially specify thousands of distinct homophilic adhesive interactions in the brain. Neonatal lethality of mice lacking the Pcdh-γ gene cluster has, however, precluded analysis of many brain regions. Here, we use a conditional Pcdh-γ allele to restrict mutation to the cerebral cortex and find that, in contrast to other central nervous system phenotypes, loss of γ-Pcdhs in cortical neurons does not affect their survival or result in reduced synaptic density. Instead, mutant cortical neurons exhibit severely reduced dendritic arborization. Mutant cortices have aberrantly high levels of protein kinase C (PKC) activity and of phosphorylated (inactive) myristoylated alanine-rich C-kinase substrate, a PKC target that promotes arborization. Dendrite complexity can be rescued in Pcdh-γ mutant neurons by inhibiting PKC, its upstream activator phospholipase C, or the γ-Pcdh binding partner focal adhesion kinase. Our results reveal a distinct role for the γ-Pcdhs in cortical development and identify a signaling pathway through which they play this role.


Subject(s)
Cadherins/metabolism , Cerebral Cortex/cytology , Dendrites/genetics , Gene Expression Regulation, Developmental/genetics , Neurons/cytology , Signal Transduction/physiology , Age Factors , Animals , Animals, Newborn , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Cadherin Related Proteins , Cadherins/genetics , Cells, Cultured , Cerebral Cortex/abnormalities , Focal Adhesion Kinase 1/metabolism , Homeodomain Proteins/genetics , Homeodomain Proteins/metabolism , Intracellular Signaling Peptides and Proteins/metabolism , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Membrane Proteins/metabolism , Mice , Mice, Transgenic , Myristoylated Alanine-Rich C Kinase Substrate , Protein Kinase C/metabolism , Sequence Deletion/genetics , Transcription Factors/genetics , Transcription Factors/metabolism , Transfection/methods
4.
J Neurochem ; 120(6): 913-27, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22092001

ABSTRACT

The choroid plexus (CP) epithelium develops from the ependyma that lines the ventricular system, and plays a critical role in the development and function of the brain. In addition to being the primary site of CSF production, the CP maintains the blood-CSF barrier via apical tight junctions between epithelial cells. Here we show that the 22-member γ-protocadherin (γ-Pcdh) family of cell adhesion molecules, which we have implicated previously in synaptogenesis and neuronal survival, is highly expressed by both CP epithelial and ependymal cells, in which γ-Pcdh protein localization is, surprisingly, tightly restricted to the apical membrane. Multi-label immunostaining demonstrates that γ-Pcdhs are excluded from tight junctions, basolateral adherens junctions, and apical cilia tufts. RT-PCR analysis indicates that, as a whole, the CP expresses most members of the Pcdh-γ gene family. Immunostaining using novel monoclonal antibodies specific for single γ-Pcdh proteins shows that individual epithelial cells differ in their apically localized γ-Pcdh repertoire. Restricted mutation of the Pcdh-γ locus in the choroid plexus and ependyma leads to significant reductions in ventricular volume, without obvious disruptions of epithelial apical-basal polarity. Together, these results suggest an unsuspected role for the γ-Pcdhs in CSF production and demonstrate a surprising molecular heterogeneity in the CP epithelium.


Subject(s)
Cadherins/metabolism , Choroid Plexus/anatomy & histology , Epithelial Cells/metabolism , Gene Expression Regulation, Developmental/physiology , Animals , Cadherin Related Proteins , Cadherins/genetics , Cell Line, Transformed , Cerebral Ventricles/metabolism , Cerebral Ventricles/ultrastructure , Cerebrospinal Fluid/physiology , Embryo, Mammalian , Ependyma/cytology , Ependyma/metabolism , Ependyma/ultrastructure , Epithelial Cells/cytology , Epithelial Cells/ultrastructure , Epithelium/anatomy & histology , Female , Forkhead Transcription Factors/genetics , Forkhead Transcription Factors/metabolism , Green Fluorescent Proteins/metabolism , Humans , Magnetic Resonance Imaging , Male , Membrane Proteins/metabolism , Mice , Mice, Transgenic , Microscopy, Electron , Mutation/genetics , Phosphoproteins/metabolism , Tight Junctions/metabolism , Tight Junctions/ultrastructure , Tubulin/metabolism , Zonula Occludens-1 Protein , beta Catenin/metabolism
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