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1.
J Biol Chem ; 282(7): 4417-4426, 2007 Feb 16.
Article in English | MEDLINE | ID: mdl-17164241

ABSTRACT

The nucleus is an extremely dynamic compartment, and protein mobility represents a key factor in transcriptional regulation. We showed in a previous study that the diffusion of peroxisome proliferator-activated receptors (PPARs), a family of nuclear receptors regulating major cellular and metabolic functions, is modulated by ligand binding. In this study, we combine fluorescence correlation spectroscopy, dual color fluorescence cross-correlation microscopy, and fluorescence resonance energy transfer to dissect the molecular mechanisms controlling PPAR mobility and transcriptional activity in living cells. First, we bring new evidence that in vivo a high percentage of PPARs and retinoid X receptors is associated even in the absence of ligand. Second, we demonstrate that coregulator recruitment (and not DNA binding) plays a crucial role in receptor mobility, suggesting that transcriptional complexes are formed prior to promoter binding. In addition, association with coactivators in the absence of a ligand in living cells, both through the N-terminal AB domain and the AF-2 function of the ligand binding domain, provides a molecular basis to explain PPAR constitutive activity.


Subject(s)
Peroxisome Proliferator-Activated Receptors/metabolism , Retinoid X Receptors/metabolism , Animals , Fluorescence Resonance Energy Transfer , HeLa Cells , Humans , Ligands , Nuclear Proteins/metabolism , Protein Structure, Tertiary , Protein Transport
2.
Bioorg Med Chem Lett ; 16(14): 3817-23, 2006 Jul 15.
Article in English | MEDLINE | ID: mdl-16650983

ABSTRACT

Three-dimensional QSAR studies for N-4-arylacryloylpiperazin-1-yl-phenyl-oxazolidinones were conducted using TSAR 3.3. The in vitro activities (MICs) of the compounds against Staphylococcus aureus ATCC 25923 exhibited a strong correlation with the prediction made by the model developed in the present study.


Subject(s)
Anti-Bacterial Agents/pharmacology , Oxazolidinones/chemistry , Oxazolidinones/pharmacology , Piperazines/chemistry , Piperazines/pharmacology , Staphylococcus aureus/drug effects , Anti-Bacterial Agents/chemistry , Microbial Sensitivity Tests , Quantitative Structure-Activity Relationship
3.
Bioorg Med Chem Lett ; 16(6): 1557-61, 2006 Mar 15.
Article in English | MEDLINE | ID: mdl-16386420

ABSTRACT

A few substituted piperazinylphenyloxazolidinone compounds 6-13 having substitution on the distant nitrogen atom of piperazine ring scaffold have been synthesized and evaluated for their antibacterial activity in Gram-positive bacteria. A few compounds showed superior in vitro antibacterial activity against Staphylococcus aureus, Staphylococcus epidermidis, Enterococcus faecalis, and Streptococcus pyogenes than linezolid and eperezolid.


Subject(s)
Anti-Bacterial Agents , Gram-Positive Bacteria/drug effects , Oxazolidinones , Piperazines/chemistry , Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Enterococcus faecalis/drug effects , Enterococcus faecalis/growth & development , Gram-Positive Bacteria/growth & development , Microbial Sensitivity Tests , Oxazolidinones/chemical synthesis , Oxazolidinones/chemistry , Oxazolidinones/pharmacology , Piperazine , Staphylococcus aureus/drug effects , Staphylococcus aureus/growth & development , Staphylococcus epidermidis/drug effects , Staphylococcus epidermidis/growth & development , Streptococcus pyogenes/drug effects , Streptococcus pyogenes/growth & development
4.
Eur J Med Chem ; 39(11): 989-92, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15501548

ABSTRACT

A few Mannich ketones of piperazinyl oxazolidinone derivatives have been synthesized and their antibacterial activity in various Gram-positive organisms such as Bacillus subtilis, Staphylococcus aureus, Staphylococcus epidermidis and Enterococcus faecalis were evaluated by MIC determination. Compound 12 showed comparable activity (MIC) to linezolid and superior to eperezolid.


Subject(s)
Anti-Bacterial Agents/chemical synthesis , Ketones/chemical synthesis , Oxazolidinones/chemical synthesis , Piperazines/chemical synthesis , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Bacillus subtilis/drug effects , Enterococcus faecalis/drug effects , Ketones/chemistry , Ketones/pharmacology , Microbial Sensitivity Tests , Oxazolidinones/chemistry , Oxazolidinones/pharmacology , Piperazines/chemistry , Piperazines/pharmacology , Staphylococcus aureus/drug effects , Staphylococcus epidermidis/drug effects
5.
Bioorg Med Chem ; 12(17): 4557-64, 2004 Sep 01.
Article in English | MEDLINE | ID: mdl-15358283

ABSTRACT

Synthesis of a number of 4,5,6,7-tetrahydro-thieno[3,2-c]pyridine substituted oxazolidinones have been reported. They have been screened against a panel of Gram-positive pathogens including methicillin-resistant Staphylococcus aureus and vancomycin-resistant Enterococcus faecalis. A SAR has been developed. Compound 15 showed comparable activity (MIC) to linezolid and superior to eperezolid.


Subject(s)
Anti-Bacterial Agents/chemical synthesis , Enterococcus faecalis/drug effects , Oxazoles/chemical synthesis , Pyridines/chemical synthesis , Staphylococcus aureus/drug effects , Acetamides/pharmacology , Anti-Bacterial Agents/pharmacology , Drug Resistance, Microbial , Linezolid , Methicillin/pharmacology , Microbial Sensitivity Tests , Oxazoles/pharmacology , Oxazolidinones/chemistry , Oxazolidinones/pharmacology , Pyridines/pharmacology , Structure-Activity Relationship , Vancomycin/pharmacology
6.
Bioorg Med Chem Lett ; 14(12): 3139-42, 2004 Jun 21.
Article in English | MEDLINE | ID: mdl-15149661

ABSTRACT

A number of substituted piperazinyl oxazolidinone derivatives have been synthesized and their antibacterial activities were evaluated by MIC determination. A systematic SAR was carried out to get highly potent oxazolidinone derivatives.


Subject(s)
Anti-Bacterial Agents/chemical synthesis , Oxazolidinones/chemical synthesis , Anti-Bacterial Agents/pharmacology , Microbial Sensitivity Tests/statistics & numerical data , Oxazolidinones/pharmacology , Structure-Activity Relationship
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