Evaluation of the effectiveness of different indicator PCBs to estimating total PCB concentrations in environmental investigations.

Polychlorinated biphenyls (PCBs) are one of the most widely studied group of persistent organic pollutants (POPs). There are 209 different PCBs, however not all 209 can currently be individually quantified in one analytical run. This means that a subset of PCBs congeners are often determined and reported. Some of the most commonly reported subsets are the 7 indicator PCBs (28, 52, 101, 118, 138, 153 and 180) and the WHO 12 PCBs (77, 81, 105, 114, 118, 123, 126, 156, 157, 167, 169 and 189). The WHO 12 congeners are co-planar 'dioxin like' PCBs that are effective for establishing health risks. The 7 indicator PCBs were selected as some of the most common PCBs across the compositional range of the most common technical mixtures (such as Aroclors), and are used to give an indication of the total PCB concentrations. These groups of indicator PCBs were established several decades ago. However, in the environment commercial mixtures are subject to weathering and fractionation processes, and additional sources of non-Aroclor PCBs are also becoming more important. In this manuscript we use existing large scale comprehensive congener specific datasets to evaluate the effectiveness of indicator PCBs to predict total concentrations and establish if they are still fit for purpose. The results indicate that while these traditional indicators are a useful tool to estimate total concentrations in humans with background exposure there are many instances where they are not fit for purpose and can lead to significant under predictions in total PCB concentrations in environmental matrices.

Comparative genomics of biotechnologically important yeasts.

Ascomycete yeasts are metabolically diverse, with great potential for biotechnology. Here, we report the comparative genome analysis of 29 taxonomically and biotechnologically important yeasts, including 16 newly sequenced. We identify a genetic code change, CUG-Ala, in Pachysolen tannophilus in the clade sister to the known CUG-Ser clade. Our well-resolved yeast phylogeny shows that some traits, such as methylotrophy, are restricted to single clades, whereas others, such as l-rhamnose utilization, have patchy phylogenetic distributions. Gene clusters, with variable organization and distribution, encode many pathways of interest. Genomics can predict some biochemical traits precisely, but the genomic basis of others, such as xylose utilization, remains unresolved. Our data also provide insight into early evolution of ascomycetes. We document the loss of H3K9me2/3 heterochromatin, the origin of ascomycete mating-type switching, and panascomycete synteny at the MAT locus. These data and analyses will facilitate the engineering of efficient biosynthetic and degradative pathways and gateways for genomic manipulation.

Cofermentation of glucose, xylose, and cellobiose by the beetle-associated yeast Spathaspora passalidarum.

Fermentation of cellulosic and hemicellulosic sugars from biomass could resolve food-versus-fuel conflicts inherent in the bioconversion of grains. However, the inability to coferment glucose and xylose is a major challenge to the economical use of lignocellulose as a feedstock. Simultaneous cofermentation of glucose, xylose, and cellobiose is problematic for most microbes because glucose represses utilization of the other saccharides. Surprisingly, the ascomycetous, beetle-associated yeast Spathaspora passalidarum, which ferments xylose and cellobiose natively, can also coferment these two sugars in the presence of 30 g/liter glucose. S. passalidarum simultaneously assimilates glucose and xylose aerobically, it simultaneously coferments glucose, cellobiose, and xylose with an ethanol yield of 0.42 g/g, and it has a specific ethanol production rate on xylose more than 3 times that of the corresponding rate on glucose. Moreover, an adapted strain of S. passalidarum produced 39 g/liter ethanol with a yield of 0.37 g/g sugars from a hardwood hydrolysate. Metabolome analysis of S. passalidarum before onset and during the fermentations of glucose and xylose showed that the flux of glycolytic intermediates is significantly higher on xylose than on glucose. The high affinity of its xylose reductase activities for NADH and xylose combined with allosteric activation of glycolysis probably accounts in part for its unusual capacities. These features make S. passalidarum very attractive for studying regulatory mechanisms enabling bioconversion of lignocellulosic materials by yeasts.

Preventing child abuse and neglect: a national evaluation of Parents Anonymous groups.

This evaluation assessed whether participation in Parents Anonymous mutual support groups was associated with child maltreatment prevention. Parents new to groups across the United States were interviewed at baseline, one month, and six months. Using standardized scales, all parents showed improvements in some child maltreatment outcomes, risk factors, and protective factors. Parents starting out with particularly serious needs showed statistically significant improvement on every scale. Results indicated that Parents Anonymous participation contributes to child maltreatment reduction.