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1.
Sci Rep ; 10(1): 20525, 2020 11 25.
Article in English | MEDLINE | ID: mdl-33239691

ABSTRACT

The effects of intraspecific and interspecific interactions between three species of scleractinian coral micro-colonies, namely Lithophyllon undulatum, Turbinaria mesenterina and Platygyra sinensis were evaluated for their survivorship, tissue loss and growth in both field (in-situ) and aquarium (ex-situ) conditions over 12 weeks. Regardless of environmental conditions and interactions, L. undulatum survived better (91.7 ± 6.2%) than T. mesenterina (75.0 ± 25.0%) and P. sinensis (60.4 ± 39.5%). Similarly, L. undulatum registered the lowest tissue loss (0.5 ± 0.7%) as compared to T. mesenterina (14.3 ± 19.4%) and P. sinensis (22.0 ± 30.0%). However, P. sinensis gained more weight (3.2 ± 5.2 g) than either T. mesenterina (2.7 ± 2.4 g) or L. undulatum (0.8 ± 1.1 g). In both environments, all three species in intraspecific interaction generally had higher survivorship, lower tissue loss and better growth than those in interspecific interaction except the latter in in-situ conditions had a twofold increase in growth (5.8 ± 3.7 g) than the former in-situ conditions (2.8 ± 3.7 g). Hence, all three species are potentially suitable for transplantation and mariculture except perhaps for P. sinensis which performed poorly in ex-situ conditions. Corals can be transplanted either with different colonies of the same species or together with other coral taxa. This study demonstrated that L. undulatum should be transplanted between T. mesenterina and P. sinensis for optimal growth and survival.


Subject(s)
Anthozoa/physiology , Animals , Environment , Geography , Probability , Singapore , Species Specificity , Water Quality , Weight Gain
2.
Mitochondrial DNA A DNA Mapp Seq Anal ; 27(4): 2651-2, 2016 07.
Article in English | MEDLINE | ID: mdl-26029876

ABSTRACT

In this study, the complete mitogenome sequence of two moray eels of Gymnothorax formosus and Scuticaria tigrina (Anguilliformes: Muraenidae) has been sequenced by the next-generation sequencing method. The assembled mitogenome, with the length of 16,558 bp for G. formosus and 16,521 bp for S. tigrina, shows 78% identity to each other. Both mitogenomes follow the typical vertebrate arrangement, including 13 protein coding genes, 22 transfer RNAs, two ribosomal RNAs genes, and a non-coding control region of D-loop. The length of D-loop is 927 bp (G. formosus) and 850 bp (S. tigrina), which is located between tRNA-Pro and tRNA-Phe. The overall GC content is 45.5% for G. formosus and 47.9% for S. tigrina. Complete mitogenomes of G. formosus and S. tigrina provide essential and important DNA molecular data for further phylogenetic and evolutionary analysis for moray eel.


Subject(s)
Eels/genetics , Genome, Mitochondrial/genetics , Animals , Base Composition/genetics , Eels/classification , Phylogeny , RNA, Ribosomal/genetics , RNA, Transfer/genetics , Sequence Analysis, DNA
3.
Mitochondrial DNA A DNA Mapp Seq Anal ; 27(4): 2431-2, 2016 07.
Article in English | MEDLINE | ID: mdl-26016872

ABSTRACT

In this study, the complete mitogenome sequence of the longfang moray, Enchelynassa canina (Anguilliformes: Muraenidae) has been sequenced by the next-generation sequencing method. The length of the assembled mitogenome is 16,592 bp, which includes 13 protein coding genes, 22 transfer RNAs, and 2 ribosomal RNAs genes. The overall base composition of longfang moray is 28.4% for A, 28.0% for C, 18.4% for G, 25.1% for T, and show 82% identities to Kidako moray, Gymnothorax kidako. The complete mitogenome of the longfang moray provides an essential and important DNA molecular data for further phylogeography and evolutionary analysis for moray eel phylogeny.


Subject(s)
Eels/classification , Eels/genetics , Genome, Mitochondrial , High-Throughput Nucleotide Sequencing , Animals , Base Composition , Evolution, Molecular , Genes, Mitochondrial , Genome Size , Open Reading Frames , Phylogeny , Sequence Analysis, DNA , Whole Genome Sequencing
4.
Mitochondrial DNA A DNA Mapp Seq Anal ; 27(6): 4230-4231, 2016 11.
Article in English | MEDLINE | ID: mdl-26000942

ABSTRACT

In this study, the complete mitogenome sequence of the Zebra moray, Gymnomuraena zebra (Anguilliformes: Muraenidae) has been sequenced by the next-generation sequencing method. The assembled mitogenome consisting of 16,576 bp includes 13 protein coding genes, 22 transfer RNAs, and two ribosomal RNAs genes. The overall base composition of Zebra moray is 30.2% for A, 26.8% for C, 17.2% for G, and 25.8% for T and show 80% identities to Kidako moray, Gymnothorax kidako. The complete mitogenome of the Zebra moray provides an essential and important DNA molecular data for further phylogeography and evolutionary analysis for moray eel phylogeny.


Subject(s)
Eels/genetics , Equidae/genetics , Genome, Mitochondrial/genetics , Animals , Base Composition/genetics , Biological Evolution , Genes, rRNA/genetics , High-Throughput Nucleotide Sequencing/methods , Phylogeny , Phylogeography/methods , RNA, Transfer/genetics
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