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1.
Cancers (Basel) ; 14(24)2022 Dec 13.
Article in English | MEDLINE | ID: mdl-36551631

ABSTRACT

According to the World Health Organization's 2018 Global Cancer Survey, cancer is the second leading cause of death. From this survey, the third most common is breast cancer, the fifth is melanoma malignum and pancreatic adenocarcinoma ranks twentieth. Undoubtedly, the early diagnosis and monitoring of these tumors and related research is important for aspects of patient care. The aim of our present review was to explain an impressive methodology that is deemed suitable in reference to studying blood sample deviations in the case of solid tumors. Essentially, we compared the heat denaturation responses of blood plasma components through differential scanning calorimetry (DSC). In the control, between five and seven separable components can be detected, in which the primary component was albumin, while in the case of tumorous patients, the peaks of immunoglobulins were dominant. Moreover, the shape of the plasma DSC curves changed with a shift in the higher temperature ranges; thus, their pattern can be used as a suitable marker of direct immunological responses. The further development of the analysis of DSC curves raises the possibility of the early diagnosis of a potential tumor, the monitoring of diseases, or testing the efficacy of the therapy from a single drop of blood.

2.
Injury ; 52 Suppl 1: S48-S52, 2021 Mar.
Article in English | MEDLINE | ID: mdl-32122626

ABSTRACT

OBJECTIVES: To evaluate the efficacy of conventional microbiological examinations in the diagnostics of septic joint and periprosthetic inflammations. DESIGN AND SETTING: Evidence Level IV, retrospective clinical study of case series. Patients treated with small and large joint septic inflammations or with periprosthetic joint infections (PJI) were entered into the study. Demographics, microbiological cultures and inflammatory mediators were evaluated. PARTICIPANTS: Between 2012 and 2016, total of 1116 hip and 241 knee surgeries were performed at our Department in relation to prostheses; including primary and revision arthroplasties and further surgeries due to PJI. During this period, 72 patients were operated with large joints infections or PJI and another 65 patients were treated due to small joint infections. MAIN OUTCOME MEASURES: The main outcome of interest was to evaluate the sensitivity of conventional microbiological cultures in the primary diagnostics of joint and periprosthetic infections. RESULTS: The most frequent bacteria strains were the Staphylococci: in 43 cases (22.16%) Staphylococcus aureus, in 22 cases (11.34%) coagulase-negative Staphylococcus, in 3 cases (1.54%) Staphylococcus epidermidis and in 4 cases (2.06%) methicillin-resistant S. aureus (MRSA) were detected. In 30 cases (21.88%), the primary microbiological investigation could not reveal the presence of bacteria. CONCLUSION: Based on our data, the efficacy of conventional microbiological testing in the diagnostics of different type of joint infections is questionable. Therefore, further studies are warranted to evaluate the efficacy of novel diagnostic testing tools in prospective randomized controlled trials.


Subject(s)
Arthritis, Infectious , Methicillin-Resistant Staphylococcus aureus , Prosthesis-Related Infections , Staphylococcal Infections , Arthritis, Infectious/diagnosis , Humans , Prospective Studies , Prosthesis-Related Infections/diagnosis , Retrospective Studies , Staphylococcal Infections/diagnosis
3.
J Photochem Photobiol B ; 164: 276-282, 2016 Nov.
Article in English | MEDLINE | ID: mdl-27718419

ABSTRACT

The effect of mammalian twinfilin-1 on the structure and dynamics of actin filaments were studied with steady state fluorescence spectroscopy, total internal reflection fluorescence microscopy and differential scanning calorimetry techniques. It was proved before that the eukaryotic budding yeast twinfilin-1 can efficiently bind and severe actin filaments in vitro at low pH values. In the present work steady-state anisotropy measurements revealed that twinfilin can bind efficiently to F-actin. Dilution-induced depolymerization assay proved that mammalian twinfilin-1 has an actin filament severing activity. This severing activity was more pronounced at low pH values. Total internal reflection fluorescence microscopy measurements could support the severing activity of mouse twinfilin-1. The average rate of depolymerization was more apparent at low pH values. The differential scanning calorimetry measurements demonstrated that mammalian twinfilin-1 could reduce the stiffness within the actin filaments before the detachment of the actin protomers. The structural and dynamic reorganization of actin can support the twinfilin-1 induced separation of actin protomers. The measured data indicated that mammalian twinfilin-1 was able to accelerate the monomers dissociation and/or sever the filaments effectively at low pH values. It was concluded that twinfilin-1 can affect the F-actin in biological processes or under stress situations when the pH is markedly under the physiological level.


Subject(s)
Hydrogen-Ion Concentration , Microfilament Proteins/chemistry , Microscopy, Fluorescence/methods , Animals , Mice
4.
FEBS Lett ; 589(20 Pt B): 3085-9, 2015 Oct 07.
Article in English | MEDLINE | ID: mdl-26348398

ABSTRACT

The effects of toxofilin (an actin binding protein of Toxoplasma gondii) on G-actin was studied with spectroscopy techniques. Fluorescence anisotropy measurements proved that G-actin and toxofilin interact with 2:1 stoichiometry. The affinity of toxofilin to actin was also determined with a fluorescence anisotropy assay. Fluorescence quenching experiments showed that the accessibility of the actin bound ε-ATP decreased in the presence of toxofilin. The results can be explained by the shift of the nucleotide binding cleft into a closed conformational state. Differential scanning calorimetry measurements revealed that actin monomers become thermodynamically more stable due to the binding of toxofilin.


Subject(s)
Actin Capping Proteins/chemistry , Actins/chemistry , Protozoan Proteins/chemistry , Thermodynamics , Actin Capping Proteins/genetics , Actin Capping Proteins/metabolism , Actins/metabolism , Algorithms , Animals , Binding Sites/genetics , Binding, Competitive , Calorimetry, Differential Scanning , Fluorescence Polarization , Hot Temperature , Kinetics , Models, Chemical , Muscle, Skeletal/metabolism , Nucleotides/chemistry , Nucleotides/metabolism , Protein Binding , Protein Denaturation , Protozoan Proteins/genetics , Protozoan Proteins/metabolism , Rabbits , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Transition Temperature
5.
Biochemistry ; 47(15): 4530-4, 2008 Apr 15.
Article in English | MEDLINE | ID: mdl-18361506

ABSTRACT

Actin plays important roles in eukaryotic cell motility. During actin polymerization, the actin-bound ATP is hydrolyzed to ADP and P i. We carried out differential scanning calorimetry experiments to characterize the cooperativity of the stabilizing effect of phalloidin on actin filaments in their ADP.P i state. The ADP.P i state was mimicked by using ADP.BeF x or ADP.AlF 4. The results showed that the binding of the nucleotide analogues or phalloidin stabilized the actin filaments to a similar extent when added separately. Phalloidin binding to ADP.BeF x- or ADP.AlF 4-actin filaments further stabilized them, indicating that the mechanism by which phalloidin and the nucleotide analogues affect the filament structure was different. The results also showed that the stabilization effect of phalloidin binding to ADP.BeF x or ADP.AlF 4-bound actin filaments was not cooperative. Since the effect of phalloidin binding was cooperative in the absence of these nucleotide analogues, these results suggest that the binding of ADP.BeF x or ADP.AlF 4 to the actin modified the protomer-protomer interactions along the actin filaments.


Subject(s)
Actin Cytoskeleton/chemistry , Adenosine Diphosphate/analogs & derivatives , Phalloidine/pharmacology , Actin Cytoskeleton/drug effects , Adenosine Diphosphate/chemistry , Beryllium/chemistry , Calorimetry, Differential Scanning , Fluorides/chemistry , Organometallic Compounds/chemistry
6.
Biochem Biophys Res Commun ; 368(3): 696-702, 2008 Apr 11.
Article in English | MEDLINE | ID: mdl-18261974

ABSTRACT

The thermodynamic properties of the actin filaments prepared from cardiomyocytes were investigated with differential scanning calorimetry. This method could distinguish between the alpha-cardiac and alpha-skeletal components of the actin filaments polymerised from ADP-actin monomers by their different melting temperatures (T(m)). Similar separation was not possible with filaments polymerised from ATP-actin monomers. Further analyses revealed that the activation energy (E(act)) was greater for filaments of alpha-skeletal actin than for alpha-cardiac actin monomers when the filaments were polymerised from ADP-actin monomers. These results showed that the alpha-cardiac actin filaments were thermodynamically less stable than the filaments of alpha-skeletal actin and their difference was nucleotide dependent. Based on these results and considering previous observations it was concluded that the existence of two actin isoforms and their nucleotide dependent conformational differences are part of the tuning regulatory mechanism by which the cardiac muscle cells can maintain their biological function under pathological conditions.


Subject(s)
Actin Cytoskeleton/chemistry , Actin Cytoskeleton/ultrastructure , Actins/chemistry , Actins/ultrastructure , Muscle Fibers, Skeletal/metabolism , Myocytes, Cardiac/metabolism , Nucleotides/chemistry , Animals , Cattle , Cells, Cultured , Computer Simulation , Models, Chemical , Models, Molecular , Protein Conformation , Protein Isoforms/chemistry , Protein Isoforms/ultrastructure , Structure-Activity Relationship
7.
BMC Struct Biol ; 7: 41, 2007 Jun 24.
Article in English | MEDLINE | ID: mdl-17588264

ABSTRACT

BACKGROUND: Thermal denaturation experiments were extended to study the thermal behaviour of the main motor proteins (actin and myosin) in their native environment in striated muscle fibres. The interaction of actin with myosin in the highly organized muscle structure is affected by internal forces; therefore their altered conformation and interaction may differ from those obtained in solution. The energetics of long functioning intermediate states of ATP hydrolysis cycle was studied in muscle fibres by differential scanning calorimetry (DSC). RESULTS: SETARAM Micro DSC-II was used to monitor the thermal denaturation of the fibre system in rigor and in the presence of nucleotide and nucleotide analogues. The AM.ADP.Pi state of the ATP hydrolysis cycle has a very short lifetime therefore, we mimicked the different intermediate states with AMP.PNP and/or inorganic phosphate analogues Vi and AlF4 or BeFx. Studying glycerol-extracted muscle fibres from the rabbit psoas muscle by DSC, three characteristic thermal transitions were detected in rigor. The thermal transitions can be assigned to myosin heads, myosin rods and actin with transition temperatures (Tm) of 52.9 +/- 0.7 degrees C, 57.9 +/- 0.7 degrees C, 63.7 +/- 1.0 degrees C. In different intermediate states of the ATP hydrolysis mimicked by nucleotide analogues a fourth thermal transition was also detected which is very likely connected with nucleotide binding domain of myosin and/or actin filaments. This transition temperature Tm4 depended on the mimicked intermediate states, and varied in the range of 66-77 degrees C. CONCLUSION: According to DSC measurements, strongly and weakly binding states of myosin to actin were significantly different. In the presence of ADP only a moderate change of the DSC pattern was detected in comparison with rigor, whereas in ADP.Pi state trapped by Vi, AlF4 or BeFx a remarkable stabilization was detected on the myosin head and actin filament which is reflected in a 3.0-10.0 degrees C shift in Tm to higher temperature. A similar effect was observed in the case of the nonhydrolyzable AMP.PNP analogue. Differential DSC measurements suggest that stabilization actin structure in the intermediate states of ATP hydrolysis may play an additional role in actin-myosin interaction.


Subject(s)
Actins/metabolism , Adenosine Triphosphate/metabolism , Muscle Fibers, Skeletal/metabolism , Myosins/metabolism , Psoas Muscles/metabolism , Actins/physiology , Animals , Calorimetry, Differential Scanning , Glycerol , Hydrolysis , Myosins/physiology , Nucleotides/metabolism , Protein Denaturation/physiology , Rabbits , Temperature
8.
Thermochim Acta ; 463(1-2): 77-80, 2007 Oct 25.
Article in English | MEDLINE | ID: mdl-20543906

ABSTRACT

The effect of BeF(x) and a natural toxin (jasplakinolide) was examined on the thermal stability of actin filaments by using differential scanning calorimetry. The phosphate analogue beryllium fluoride shifted the melting temperature of actin filaments (67.4 degrees C) to 83.7 degrees C indicating that the filaments were thermodynamically more stable in their complex with ADP.BeF(x). A similar tendency was observed when the jasplakinolide was used in the absence of BeF(x). When both the ADP.BeF(x) and the jasplakinolide bound to the actin filaments their collective effect was similar to that observed with ADP.BeF(x) or jasplakinolide alone. These results suggested that ADP.BeF(x) and jasplakinolide probably stabilize the actin filaments by similar molecular mechanisms.

9.
J Biol Chem ; 281(16): 10727-36, 2006 Apr 21.
Article in English | MEDLINE | ID: mdl-16490788

ABSTRACT

The members of the formin family nucleate actin polymerization and play essential roles in the regulation of the actin cytoskeleton during a wide range of cellular and developmental processes. In the present work, we describe the effects of mDia1-FH2 on the conformation of actin filaments by using a temperature-dependent fluorescence resonance energy transfer method. Our results revealed that actin filaments were more flexible in the presence than in the absence of formin. The effect strongly depends on the mDia1-FH2 concentration in a way that indicates that more than one mechanism is responsible for the formin effect. In accordance with the more flexible filament structure, the thermal stability of actin decreased and the rate of phosphate dissociation from actin filaments increased in the presence of formin. The interpretation of the results supports a model in which formin binding to barbed ends makes filaments more flexible through long range allosteric interactions, whereas binding of formin to the sides of the filaments stabilizes the protomer-protomer interactions. These results suggest that formins can regulate the conformation of actin filaments and may thus also modulate the affinity of actin-binding proteins to filaments nucleated/capped by formins.


Subject(s)
Actin Cytoskeleton/chemistry , Carrier Proteins/physiology , Fetal Proteins/metabolism , Microfilament Proteins/metabolism , Nuclear Proteins/metabolism , Actins/chemistry , Allosteric Site , Animals , Calorimetry, Differential Scanning , Carrier Proteins/chemistry , Cytoskeleton/metabolism , Dimerization , Fetal Proteins/chemistry , Fluorescence Resonance Energy Transfer , Formins , Hot Temperature , Mice , Microfilament Proteins/chemistry , Microscopy, Fluorescence , Models, Biological , Models, Chemical , Molecular Conformation , Nuclear Proteins/chemistry , Phosphates/chemistry , Protein Binding , Protein Subunits/chemistry , Proteins/chemistry , Temperature , Thermodynamics
10.
FEBS Lett ; 579(1): 6-10, 2005 Jan 03.
Article in English | MEDLINE | ID: mdl-15620683

ABSTRACT

The stabilisation of magnesium actin filaments by phalloidin and jasplakinolide was studied using the method of differential scanning calorimetry. The results showed that actin could adapt three conformations in the presence of drugs. One conformation was adapted in direct interaction with the drug, while another conformation was identical to that observed in the absence of drugs. A third conformation was induced through allosteric inter-protomer interactions. The effect of both drugs propagated cooperatively along the actin filaments. The number of the cooperative units determined by using a quantitative model was larger for jasplakinolide (15 actin protomers) than for phalloidin (7 protomers).


Subject(s)
Actin Cytoskeleton/chemistry , Actin Cytoskeleton/drug effects , Depsipeptides/pharmacology , Models, Chemical , Phalloidine/pharmacology , Actin Cytoskeleton/metabolism , Animals , Calorimetry, Differential Scanning , Magnesium/metabolism , Molecular Conformation , Rabbits , Temperature
11.
FEBS Lett ; 565(1-3): 163-6, 2004 May 07.
Article in English | MEDLINE | ID: mdl-15135072

ABSTRACT

In this work the effect of phalloidin and jasplakinolide on the dynamic properties and thermal stability of actin filaments was studied. Temperature dependent fluorescence resonance energy transfer measurements showed that filaments of Ca-actin became more rigid in the presence of phalloidin or jasplakinolide. Differential scanning calorimetric data implied that the stiffer filaments also had greater thermal stability in the presence of phalloidin or jasplakinolide. The fluorescence and calorimetric measurements provided evidences that the extent of stabilization by jasplakinolide was greater than that by phalloidin.


Subject(s)
Actins/chemistry , Depsipeptides , Peptides, Cyclic/pharmacology , Phalloidine/pharmacology , Animals , Antineoplastic Agents/pharmacology , Calorimetry , Calorimetry, Differential Scanning , Fluorescence Resonance Energy Transfer , Microscopy, Fluorescence , Muscle, Skeletal/metabolism , Protein Conformation/drug effects , Rabbits , Temperature , Thermodynamics
12.
Environ Toxicol Pharmacol ; 16(3): 163-8, 2004 Apr.
Article in English | MEDLINE | ID: mdl-21782703

ABSTRACT

Differential scanning calorimetry (DSC) and electron paramagnetic resonance spectroscopy (EPR) experiments were performed on human erythrocyte membranes and 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) model systems in order to study the effect the polycyclic aromatic hydrocarbons on lipid structure and dynamics. Eight different compounds among others naphthalene and pyrene were compared, which occur in significant concentrations in dust collected from the air in large cities. Experiments using spin label technique showed that the compounds induced mobility changes in the lipid region in the environment of the fatty acid probe molecules incorporated into the membranes. The effects depended on the structure and concentration of the different compounds. Similarly to EPR observations, DSC measurements reported decrease of transition temperature in comparison to control DPPC vesicles. These results suggest that polycyclic aromatic hydrocarbons were able to modify the internal dynamics of erythrocyte membranes which might lead to damage of the biological functions.

13.
J Biochem Biophys Methods ; 53(1-3): 67-74, 2002.
Article in English | MEDLINE | ID: mdl-12406588

ABSTRACT

The domain movement in myosin head plays a decisive role in the energy transduction process of the muscle contraction. During hydrolysis of ATP, the specific formation of strong binding of myosin head for actin causes conformational changes. As a consequence, the light chain-binding motif generates the powerstroke. In our work maleimide spin labels were covalently attached to Cys-177 residue of ELC in subfragment-1 (S1). Our goal was to study the orientation dependence and the motion of S1, which were incorporated into glycerinated skeletal muscle fibres. The electron paramagnetic resonance spectroscopy (EPR) spectra of the probes depended strongly on the orientation of the fibre axis relative to the magnetic field, indicating that the essential light chain (ELC) and the neck were ordered. The probes were undergoing rapid motion within a cone. The half-width of the cone was estimated to be 65+/-5 degrees (SD, n=8). Addition of ADP affected little the hyperfine splitting and the angular spread of the probe distribution. In the presence of ADP and orthovanadate the intensity of the spectra decreased, which showed the dissociation of S1 and this was accompanied with the disappearance of the orientation dependence.


Subject(s)
Adenosine Diphosphate/chemistry , Electron Spin Resonance Spectroscopy/methods , Molecular Motor Proteins/chemistry , Muscle Fibers, Skeletal/chemistry , Myosins/chemistry , Adenosine Diphosphate/metabolism , Animals , Computer Simulation , In Vitro Techniques , Maleimides , Models, Molecular , Molecular Motor Proteins/metabolism , Molecular Probe Techniques , Motion , Muscle Fibers, Skeletal/metabolism , Muscle, Skeletal , Myosin Light Chains/chemistry , Myosin Light Chains/metabolism , Myosin Subfragments/chemistry , Myosin Subfragments/metabolism , Myosins/metabolism , Nucleotides/chemistry , Nucleotides/metabolism , Protein Structure, Tertiary , Psoas Muscles , Rabbits , Spin Labels
14.
Eur J Biochem ; 269(8): 2168-77, 2002 Apr.
Article in English | MEDLINE | ID: mdl-11985595

ABSTRACT

Conventional and saturation transfer electron paramagnetic resonance spectroscopy (EPR and ST EPR) was used to study the orientation of probe molecules in muscle fibers in different intermediate states of the ATP hydrolysis cycle. A separate procedure was used to obtain ST EPR spectra with precise phase settings even in the case of samples with low spectral intensity. Fibers prepared from rabbit psoas muscle were labeled with isothiocyanate spin labels at the reactive thiol sites of the catalytic domain of myosin. In comparison with rigor, a significant difference was detected in the orientation-dependence of spin labels in the ADP and adenosine 5'-[beta,gamma-imido]triphosphate (AdoPP[CH2]P) states, indicating changes in the internal dynamics and domain orientation of myosin. In the AdoPP[CH2]P state, approximately half of the myosin heads reflected the motional state of ADP-myosin, and the other half showed a different dynamic state with greater mobility.


Subject(s)
Adenylyl Imidodiphosphate/chemistry , Myosins/chemistry , Animals , Electron Spin Resonance Spectroscopy , Molecular Motor Proteins , Muscle Fibers, Skeletal/chemistry , Protein Structure, Tertiary , Rabbits
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