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1.
Sensors (Basel) ; 23(20)2023 Oct 10.
Article in English | MEDLINE | ID: mdl-37896471

ABSTRACT

Conventional squinted sliding spotlight synthetic aperture radar (SAR) imaging suffers from substantial swath width reduction and complex processing requirements due to the continuous variation in the squint angle and the large range cell migration (RCM) throughout the data acquisition interval. A novel two-dimensional (2D) beam scanning mode for high-resolution wide swath (HRWS) imaging is proposed. The key to the novel imaging mode lies in the synchronous scanning of azimuth and range beams, allowing for a broader and more flexible imaging swath with a high geometric resolution. Azimuth beam scanning from fore to aft was used to improve the azimuth resolution, while range beam scanning was adopted to illuminate the oblique wide swath to avoid the large RCM and the serious swath width reduction. Compared with the conventional sliding spotlight mode, both the swath width and swath length could be extended. According to the echo model of this imaging mode, an echo signal preprocessing approach is proposed. The key points of this approach are range data extension and azimuth data upsampling. A designed system example with a resolution of 0.5 m, swath width of 60 km, and azimuth coverage length of 134 km is presented. Furthermore, a simulation experiment on point targets was carried out. Both the presented system example and imaging results of point targets validated the proposed imaging mode.

2.
Nat Commun ; 14(1): 4713, 2023 08 05.
Article in English | MEDLINE | ID: mdl-37543649

ABSTRACT

Mitochondrial RNA splicing 2 (Mrs2), a eukaryotic CorA ortholog, enables Mg2+ to permeate the inner mitochondrial membrane and plays an important role in mitochondrial metabolic function. However, the mechanism by which Mrs2 permeates Mg2+ remains unclear. Here, we report four cryo-electron microscopy (cryo-EM) reconstructions of Homo sapiens Mrs2 (hMrs2) under various conditions. All of these hMrs2 structures form symmetrical pentamers with very similar pentamer and protomer conformations. A special structural feature of Cl--bound R-ring, which consists of five Arg332 residues, was found in the hMrs2 structure. Molecular dynamics simulations and mitochondrial Mg2+ uptake assays show that the R-ring may function as a charge repulsion barrier, and Cl- may function as a ferry to jointly gate Mg2+ permeation in hMrs2. In addition, the membrane potential is likely to be the driving force for Mg2+ permeation. Our results provide insights into the channel assembly and Mg2+ permeation of hMrs2.


Subject(s)
Mitochondria , Mitochondrial Membranes , Humans , Cryoelectron Microscopy , Mitochondria/metabolism , Mitochondrial Membranes/metabolism , RNA Splicing , RNA, Mitochondrial/metabolism
3.
Sci Adv ; 9(29): eadh9002, 2023 07 21.
Article in English | MEDLINE | ID: mdl-37467330

ABSTRACT

Short prokaryotic argonaute (pAgo) and toll/interleukin-1 receptor/resistance protein (TIR)-analog of PAZ (APAZ) form a heterodimeric SPARTA complex that provides immunity to its prokaryotic host through an abortive infection mechanism. Monomeric SPARTA senses foreign RNA/DNA duplexes to assemble an active tetramer resulting in cell death by nicotinamide adenine dinucleotide (oxidized form) (NAD) depletion via an unknown mechanism. We report nine structures of SPARTA in different functional states at a resolution range of 4.2 to 2.9 angstroms, revealing its activation mechanism. Inactive SPARTA monomers bind to RNA/DNA duplexes to form symmetric dimers mediated by the association of Ago subunits. The initiation of tetramer assembly induces flexibility of the TIR domains enabling a symmetry-breaking rotational movement of a TIR domain in the dimer units which facilitates the TIR oligomerization, resulting in the formation of the substrate binding pocket and the activation of the SPARTA complex's NADase activity. Our findings provide detailed structural and mechanistic insights into activating a short argonaute defense system.


Subject(s)
Prokaryotic Cells , RNA , DNA , Immune System
4.
Cell Rep ; 38(9): 110445, 2022 03 01.
Article in English | MEDLINE | ID: mdl-35235791

ABSTRACT

TACAN is an ion channel-like protein that may be involved in sensing mechanical pain. Here, we present the cryo-electron microscopic structure of human TACAN (hTACAN). hTACAN forms a dimer in which each protomer consists of a transmembrane globular domain (TMD) containing six helices and an intracellular domain (ICD) containing two helices. Molecular dynamic simulations suggest that each protomer contains a putative ion conduction pore. A single-point mutation of the key residue Met207 greatly increases membrane pressure-activated currents. In addition, each hTACAN subunit binds one cholesterol molecule. Our data show the molecular assembly of hTACAN and suggest that wild-type hTACAN is in a closed state.


Subject(s)
Carrier Proteins , Ion Channels/chemistry , Pain , Cryoelectron Microscopy , Humans , Membranes , Protein Domains , Protein Subunits
5.
J Biol Chem ; 298(5): 101838, 2022 05.
Article in English | MEDLINE | ID: mdl-35339491

ABSTRACT

Calcium homeostasis modulator 1 (CALHM1) is a voltage- and Ca2+-gated ATP channel that plays an important role in neuronal signaling. However, as the previously reported CALHM structures are all in the ATP-conducting state, the gating mechanism of ATP permeation is still elusive. Here, we report cryo-EM reconstructions of two Danio rerio CALHM1 heptamers with ordered or flexible long C-terminal helices at resolutions of 3.2 Å and 2.9 Å, respectively, and one D. rerio CALHM1 octamer with flexible long C-terminal helices at a resolution of 3.5 Å. Structural analysis shows that the heptameric CALHM1s are in an ATP-nonconducting state with a central pore diameter of approximately 6.6 Å. Compared with those inside the octameric CALHM1, the N-helix inside the heptameric CALHM1 is in the "down" position to avoid steric clashing with the adjacent TM1 helix. Molecular dynamics simulations show that as the N-helix moves from the "down" position to the "up" position, the pore size of ATP molecule permeation increases significantly. Our results provide important information for elucidating the mechanism of ATP molecule permeation in the CALHM1 channel.


Subject(s)
Adenosine Triphosphate , Calcium Channels , Zebrafish Proteins , Adenosine Triphosphate/metabolism , Animals , Calcium/metabolism , Calcium Channels/chemistry , Cryoelectron Microscopy , Homeostasis , Zebrafish , Zebrafish Proteins/chemistry
6.
Protein Expr Purif ; 193: 106045, 2022 05.
Article in English | MEDLINE | ID: mdl-34999216

ABSTRACT

Transmembrane bax inhibitor-1 motif containing protein 5 (TMBIM5) is located on the inner membrane of mitochondria and is widely expressed in tissues but less frequently in the intestine and thymus. TMBIM5 affects mitochondrial cristae organization and is associated with Parkinson's disease. Here, we present the first report about expression, purification and the 2D classification projections derived from negatively stained electron micrographs of recombinant H. sapiens TMBIM5 (hTMBIM5). The described methods and results will support further structural and functional study of hTMBIM5.


Subject(s)
Mitochondria , Mitochondrial Membranes , Mitochondria/metabolism , bcl-2-Associated X Protein/genetics , bcl-2-Associated X Protein/metabolism
7.
Sci Adv ; 7(23)2021 06.
Article in English | MEDLINE | ID: mdl-34088669

ABSTRACT

Calcium-sensing receptor (CaSR) is a class C G protein-coupled receptor (GPCR) that plays an important role in calcium homeostasis and parathyroid hormone secretion. Here, we present multiple cryo-electron microscopy structures of full-length CaSR in distinct ligand-bound states. Ligands (Ca2+ and l-tryptophan) bind to the extracellular domain of CaSR and induce large-scale conformational changes, leading to the closure of two heptahelical transmembrane domains (7TMDs) for activation. The positive modulator (evocalcet) and the negative allosteric modulator (NPS-2143) occupy the similar binding pocket in 7TMD. The binding of NPS-2143 causes a considerable rearrangement of two 7TMDs, forming an inactivated TM6/TM6 interface. Moreover, a total of 305 disease-causing missense mutations of CaSR have been mapped to the structure in the active state, creating hotspot maps of five clinical endocrine disorders. Our results provide a structural framework for understanding the activation, allosteric modulation mechanism, and disease therapy for class C GPCRs.

9.
Biochem Biophys Res Commun ; 557: 187-191, 2021 06 11.
Article in English | MEDLINE | ID: mdl-33872987

ABSTRACT

Human ATP-binding cassette transporter 8 of subfamily B (hABCB8) is an ABC transporter that located in the inner membrane of mitochondria. The ABCB8 is involved in the maturation of Fe-S and protects the heart from oxidative stress. Here, we present the cryo-EM structure of human ABCB8 binding with AMPPNP in inward-facing conformation with resolution of 4.1 Å. hABCB8 shows an open-inward conformation when ATP is bound. Unexpectedly, cholesterol molecules were identified in the transmembrane domain of hABCB8. Our results provide structural basis for the transport mechanism of the ABC transporter in mitochondria.


Subject(s)
ATP Binding Cassette Transporter, Subfamily G, Member 1/chemistry , Adenosine Triphosphate/chemistry , Adenylyl Imidodiphosphate/chemistry , ATP Binding Cassette Transporter, Subfamily G, Member 1/genetics , ATP Binding Cassette Transporter, Subfamily G, Member 1/metabolism , Binding Sites , Cholesterol/chemistry , Cryoelectron Microscopy , Gene Expression , Membrane Transport Proteins/chemistry , Mitochondria/chemistry , Mitochondria/metabolism , Models, Molecular , Protein Binding , Protein Conformation , Protein Domains , Recombinant Proteins
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