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1.
J Cell Sci ; 131(8)2018 04 13.
Article in English | MEDLINE | ID: mdl-29507116

ABSTRACT

This paper describes a novel type of nuclear structure - nuclear lipid islets (NLIs). They are of 40-100 nm with a lipidic interior, and phosphatidylinositol 4,5-bisphosphate [PtdIns(4,5)P2] molecules comprise a significant part of their surface. Most of NLIs have RNA at the periphery. Consistent with that, RNA is required for their integrity. The NLI periphery is associated with Pol II transcription machinery, including the largest Pol II subunit, transcription factors and NM1 (also known as NMI). The PtdIns(4,5)P2-NM1 interaction is important for Pol II transcription, since NM1 knockdown reduces the Pol II transcription level, and the overexpression of wild-type NM1 [but not NM1 mutated in the PtdIns(4,5)P2-binding site] rescues the transcription. Importantly, Pol II transcription is dependent on NLI integrity, because an enzymatic reduction of the PtdIns(4,5)P2 level results in a decrease of the Pol II transcription level. Furthermore, about half of nascent transcripts localise to NLIs, and transcriptionally active transgene loci preferentially colocalise with NLIs. We hypothesize that NLIs serve as a structural platform that facilitates the formation of Pol II transcription factories, thus participating in the formation of nuclear architecture competent for transcription.


Subject(s)
Cell Nucleus/metabolism , Phosphatidylinositol 4,5-Diphosphate/metabolism , RNA Polymerase II/metabolism , Transcription Factors/metabolism , Humans
2.
Mol Cell Proteomics ; 17(1): 81-94, 2018 01.
Article in English | MEDLINE | ID: mdl-29046388

ABSTRACT

Dendritic cells (DCs) infected by Francisella tularensis are poorly activated and do not undergo classical maturation process. Although reasons of such unresponsiveness are not fully understood, their impact on the priming of immunity is well appreciated. Previous attempts to explain the behavior of Francisella-infected DCs were hypothesis-driven and focused on events at later stages of infection. Here, we took an alternative unbiased approach by applying methods of global phosphoproteomics to analyze the dynamics of cell signaling in primary DCs during the first hour of infection by Francisella tularensis Presented results show that the early response of DCs to Francisella occurs in phases and that ERK and p38 signaling modules induced at the later stage are differentially regulated by virulent and attenuated ΔdsbA strain. These findings imply that the temporal orchestration of host proinflammatory pathways represents the integral part of Francisella life-cycle inside hijacked DCs.


Subject(s)
Dendritic Cells/metabolism , Extracellular Signal-Regulated MAP Kinases/metabolism , Francisella tularensis , Tularemia/metabolism , p38 Mitogen-Activated Protein Kinases/metabolism , Animals , Cell Line , Dendritic Cells/microbiology , Female , Mice, Inbred C57BL , Phosphorylation
3.
J Plant Physiol ; 171(17): 1625-33, 2014 Nov 01.
Article in English | MEDLINE | ID: mdl-25171514

ABSTRACT

Cytokinins (CKs) as well as the antioxidant enzyme system (AES) play important roles in plant stress responses. The expression and activity of antioxidant enzymes (AE) were determined in drought, heat and combination of both stresses, comparing the response of tobacco plants overexpressing the main cytokinin degrading enzyme, cytokinin oxidase/dehydrogenase, under the control of root-specific WRKY6 promoter (W6:CKX1 plants) or constitutive promoter (35S:CKX1 plants) and the corresponding wild-type (WT). Expression levels as well as activities of cytosolic ascorbate peroxidase, catalase 3, and cytosolic superoxide dismutase were low under optimal conditions and increased after heat and combined stress in all genotypes. Unlike catalase 3, two other peroxisomal enzymes, catalase 1 and catalase 2, were transcribed extensively under control conditions. Heat stress, in contrast to drought or combined stress, increased catalase 1 and reduced catalase 2 expression in WT and W6:CKX1 plants. In 35S:CKX1, catalase 1 expression was enhanced by heat or drought, but not under combined stress conditions. Mitochondrial superoxide dismutase expression was generally higher in 35S:CKX1 plants than in WT. Genes encoding for chloroplastic AEs, stromatal ascorbate peroxidase, thylakoidal ascorbate peroxidase and chloroplastic superoxide dismutase, were strongly transcribed under control conditions. All stresses down-regulated their expression in WT and W6:CKX1, whereas more stress-tolerant 35S:CKX1 plants maintained high expression during drought and heat. The achieved data show that the effect of down-regulation of CK levels on AES may be mediated by altered habit, resulting in improved stress tolerance, which is associated with diminished stress impact on photosynthesis, and changes in source/sink relations.


Subject(s)
Antioxidants/metabolism , Gene Expression Regulation, Plant , Nicotiana/enzymology , Oxidoreductases/genetics , Arabidopsis/enzymology , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Ascorbate Peroxidases/metabolism , Catalase/metabolism , Cytokinins/metabolism , Down-Regulation , Droughts , Hot Temperature , Models, Biological , Oxidoreductases/metabolism , Photosynthesis , Plant Leaves/enzymology , Plant Leaves/genetics , Plant Leaves/physiology , Plant Roots/enzymology , Plant Roots/genetics , Plants, Genetically Modified , Promoter Regions, Genetic/genetics , Stress, Physiological , Superoxide Dismutase/metabolism , Nicotiana/genetics , Nicotiana/physiology
4.
J Exp Bot ; 64(10): 2805-15, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23669573

ABSTRACT

Responses to drought, heat, and combined stress were compared in tobacco (Nicotiana tabacum L.) plants ectopically expressing the cytokinin oxidase/dehydrogenase CKX1 gene of Arabidopsis thaliana L. under the control of either the predominantly root-expressed WRKY6 promoter or the constitutive 35S promoter, and in the wild type. WRKY6:CKX1 plants exhibited high CKX activity in the roots under control conditions. Under stress, the activity of the WRKY6 promoter was down-regulated and the concomitantly reduced cytokinin degradation coincided with raised bioactive cytokinin levels during the early phase of the stress response, which might contribute to enhanced stress tolerance of this genotype. Constitutive expression of CKX1 resulted in an enlarged root system, a stunted, dwarf shoot phenotype, and a low basal level of expression of the dehydration marker gene ERD10B. The high drought tolerance of this genotype was associated with a relatively moderate drop in leaf water potential and a significant decrease in leaf osmotic potential. Basal expression of the proline biosynthetic gene P5CSA was raised. Both wild-type and WRKY6:CKX1 plants responded to heat stress by transient elevation of stomatal conductance, which correlated with an enhanced abscisic acid catabolism. 35S:CKX1 transgenic plants exhibited a small and delayed stomatal response. Nevertheless, they maintained a lower leaf temperature than the other genotypes. Heat shock applied to drought-stressed plants exaggerated the negative stress effects, probably due to the additional water loss caused by a transient stimulation of transpiration. The results indicate that modulation of cytokinin levels may positively affect plant responses to abiotic stress through a variety of physiological mechanisms.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/enzymology , Nicotiana/physiology , Oxidoreductases/genetics , Plants, Genetically Modified/physiology , Arabidopsis/genetics , Arabidopsis Proteins/metabolism , Cytokinins/metabolism , Droughts , Gene Expression , Gene Expression Regulation, Plant , Hot Temperature , Oxidoreductases/metabolism , Plants, Genetically Modified/chemistry , Plants, Genetically Modified/genetics , Promoter Regions, Genetic , Nicotiana/chemistry , Nicotiana/genetics
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