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1.
PLoS Comput Biol ; 19(3): e1010920, 2023 03.
Article in English | MEDLINE | ID: mdl-36877741

ABSTRACT

We present a multiagent-based model that captures the interactions between different types of cells with their microenvironment, and enables the analysis of the emergent global behavior during tissue regeneration and tumor development. Using this model, we are able to reproduce the temporal dynamics of regular healthy cells and cancer cells, as well as the evolution of their three-dimensional spatial distributions. By tuning the system with the characteristics of the individual patients, our model reproduces a variety of spatial patterns of tissue regeneration and tumor growth, resembling those found in clinical imaging or biopsies. In order to calibrate and validate our model we study the process of liver regeneration after surgical hepatectomy in different degrees. In the clinical context, our model is able to predict the recurrence of a hepatocellular carcinoma after a 70% partial hepatectomy. The outcomes of our simulations are in agreement with experimental and clinical observations. By fitting the model parameters to specific patient factors, it might well become a useful platform for hypotheses testing in treatments protocols.


Subject(s)
Carcinoma, Hepatocellular , Liver Neoplasms , Humans , Liver Regeneration , Hepatectomy , Models, Biological , Neoplasm Recurrence, Local , Tumor Microenvironment
2.
Phys Rev E ; 95(2-1): 022801, 2017 Feb.
Article in English | MEDLINE | ID: mdl-28297842

ABSTRACT

We performed extensive simulations of the random-bond Ising model confined between walls where competitive surface fields act. By properly taking the thermodynamic limit we unambiguously determined wetting transition points of the system, as extrapolation of localization-delocalization transitions of the interface between domains of different orientation driven by the respective fields. The finite-size scaling theory for wetting with short-range fields [E. V. Albano and K. Binder, Phys. Rev. Lett. 109, 036101 (2012)PRLTAO0031-900710.1103/PhysRevLett.109.036101] establishes that the average magnetization of the sample, with critical exponent ß, is the proper order parameter for the study of wetting. While the hyperscaling relationship given by γ+2ß=ν_{∥}+ν_{⊥} requires ß=1/2 (γ=4, ν_{∥}=3, and ν_{⊥}=2), the thermodynamic scaling establishes that Δ_{s}=γ+ß, which in contrast requires ß=0 (Δ_{s}=4), where γ, ν_{∥}, ν_{⊥}, and Δ_{s} are the critical exponents of the susceptibility, the correlation lengths parallel and perpendicular to the interface, and the gap exponent, respectively. So, we formulate a finite-size scaling theory for wetting without hyperscaling and perform numerical simulations that provide strong evidence of hyperscaling violation (i.e., ß=0) and a direct measurement of the susceptibility critical exponent γ/ν_{⊥}=2.0±0.2, in agreement with theoretical results for the strong fluctuation regime of wetting transitions with quenched noise.

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