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1.
Nat Commun ; 14(1): 5466, 2023 09 25.
Article in English | MEDLINE | ID: mdl-37749075

ABSTRACT

The interplay between 3D chromatin architecture and gene silencing is incompletely understood. Here, we report a novel point mutation in the non-canonical SMC protein SMCHD1 that enhances its silencing capacity at endogenous developmental targets. Moreover, it also results in enhanced silencing at the facioscapulohumeral muscular dystrophy associated macrosatellite-array, D4Z4, resulting in enhanced repression of DUX4 encoded by this repeat. Heightened SMCHD1 silencing perturbs developmental Hox gene activation, causing a homeotic transformation in mice. Paradoxically, the mutant SMCHD1 appears to enhance insulation against other epigenetic regulators, including PRC2 and CTCF, while depleting long range chromatin interactions akin to what is observed in the absence of SMCHD1. These data suggest that SMCHD1's role in long range chromatin interactions is not directly linked to gene silencing or insulating the chromatin, refining the model for how the different levels of SMCHD1-mediated chromatin regulation interact to bring about gene silencing in normal development and disease.


Subject(s)
Chromatin , Chromosomal Proteins, Non-Histone , Muscular Dystrophy, Facioscapulohumeral , Animals , Mice , Chromatin/genetics , Epigenomics , Gene Silencing , Genes, Homeobox , Muscular Dystrophy, Facioscapulohumeral/genetics , Chromosomal Proteins, Non-Histone/genetics
2.
Nat Commun ; 13(1): 3583, 2022 06 23.
Article in English | MEDLINE | ID: mdl-35739109

ABSTRACT

The body plan of animals is laid out by an evolutionary-conserved HOX code which is colinearly transcribed after zygotic genome activation (ZGA). Here we report that SMCHD1, a chromatin-modifying enzyme needed for X-inactivation in mammals, is maternally required for timely HOX expression. Using zebrafish and mouse Smchd1 knockout animals, we demonstrate that Smchd1 haplo-insufficiency brings about precocious and ectopic HOX transcription during oogenesis and embryogenesis. Unexpectedly, wild-type offspring born to heterozygous knockout zebrafish smchd1 mothers exhibited patent vertebrate patterning defects. The loss of maternal Smchd1 was accompanied by HOX epi-mutations driven by aberrant DNA methylation. We further show that this regulation is mediated by Lrif1, a direct interacting partner of Smchd1, whose knockout in zebrafish phenocopies that of Smchd1. Rather than being a short-lived maternal effect, HOX mis-regulation is stably inherited through cell divisions and persists in cultured fibroblasts derived from FSHD2 patients haploinsufficient for SMCHD1. We conclude that maternal SMCHD1/LRIF1 sets up an epigenetic state in the HOX loci that can only be reset in the germline. Such an unusual inter-generational inheritance, whereby a phenotype can be one generation removed from its genotype, casts a new light on how unresolved Mendelian diseases may be interpreted.


Subject(s)
Chromosomal Proteins, Non-Histone , Genes, Homeobox , Haploinsufficiency , Muscular Dystrophy, Facioscapulohumeral , Animals , Chromatin/genetics , Chromosomal Proteins, Non-Histone/genetics , Chromosomal Proteins, Non-Histone/metabolism , Epigenesis, Genetic , Humans , Mice , Muscular Dystrophy, Facioscapulohumeral/genetics , Zebrafish/genetics , Zebrafish/metabolism , Zebrafish Proteins/genetics
3.
Psychol Res Behav Manag ; 14: 2081-2091, 2021.
Article in English | MEDLINE | ID: mdl-34949944

ABSTRACT

PURPOSE: The fourth wave of the COVID-19 pandemic has dramatically influenced many aspects of individuals' lives, putting the general population's mental health at high risk, especially university students in Vietnam. The present study aims to investigate the relationship between current living status and COVID-19 stress and test whether COVID-19 stress mediates the effect of self-concealment on help-seeking attitudes among university students. PATIENTS AND METHODS: A sample of 478 university students was recruited online to complete the survey. Parametric tests, correlation, regression, and simple mediation analyses were used to analyze the data. RESULTS: Our results show that students living alone experience more COVID-19 stress levels than those living with family or friends. Additionally, there is a significant positive association between self-concealment and professional help-seeking attitudes that is partially mediated by COVID-19 stress. Individuals who tend to conceal personal information have high COVID-19 stress levels, leading to positive professional help-seeking attitudes. CONCLUSION: University administrators, social workers, counselors, clinicians, and therapists must consider students living alone as prioritized vulnerable groups for early mental health interventions. Clinicians should be aware of self-concealment and professional help-seeking attitudes that could influence psychological treatment.

5.
Am J Hum Genet ; 108(7): 1301-1317, 2021 07 01.
Article in English | MEDLINE | ID: mdl-34038740

ABSTRACT

Human C2orf69 is an evolutionarily conserved gene whose function is unknown. Here, we report eight unrelated families from which 20 children presented with a fatal syndrome consisting of severe autoinflammation and progredient leukoencephalopathy with recurrent seizures; 12 of these subjects, whose DNA was available, segregated homozygous loss-of-function C2orf69 variants. C2ORF69 bears homology to esterase enzymes, and orthologs can be found in most eukaryotic genomes, including that of unicellular phytoplankton. We found that endogenous C2ORF69 (1) is loosely bound to mitochondria, (2) affects mitochondrial membrane potential and oxidative respiration in cultured neurons, and (3) controls the levels of the glycogen branching enzyme 1 (GBE1) consistent with a glycogen-storage-associated mitochondriopathy. We show that CRISPR-Cas9-mediated inactivation of zebrafish C2orf69 results in lethality by 8 months of age due to spontaneous epileptic seizures, which is preceded by persistent brain inflammation. Collectively, our results delineate an autoinflammatory Mendelian disorder of C2orf69 deficiency that disrupts the development/homeostasis of the immune and central nervous systems.


Subject(s)
Encephalitis/genetics , Mitochondrial Diseases/genetics , Animals , Biological Evolution , CRISPR-Cas Systems , Cell Line , Encephalitis/mortality , Female , Genes, Recessive , Glycogen/metabolism , Humans , Inflammation/genetics , Male , Membrane Proteins/genetics , Mitochondrial Diseases/mortality , Pedigree , Seizures/genetics , Seizures/mortality , Zebrafish/genetics
6.
J Biol Chem ; 293(25): 9841-9853, 2018 06 22.
Article in English | MEDLINE | ID: mdl-29748383

ABSTRACT

Structural maintenance of chromosomes flexible hinge domain-containing 1 (Smchd1) plays important roles in epigenetic silencing and normal mammalian development. Recently, heterozygous mutations in SMCHD1 have been reported in two disparate disorders: facioscapulohumeral muscular dystrophy type 2 (FSHD2) and Bosma arhinia microphthalmia syndrome (BAMS). FSHD2-associated mutations lead to loss of function; however, whether BAMS is associated with loss- or gain-of-function mutations in SMCHD1 is unclear. Here, we have assessed the effect of SMCHD1 missense mutations from FSHD2 and BAMS patients on ATP hydrolysis activity and protein conformation and the effect of BAMS mutations on craniofacial development in a Xenopus model. These data demonstrated that FSHD2 mutations only result in decreased ATP hydrolysis, whereas many BAMS mutations can result in elevated ATPase activity and decreased eye size in Xenopus Interestingly, a mutation reported in both an FSHD2 patient and a BAMS patient results in increased ATPase activity and a smaller Xenopus eye size. Mutations in the extended ATPase domain increased catalytic activity, suggesting critical regulatory intramolecular interactions and the possibility of targeting this region therapeutically to boost SMCHD1's activity to counter FSHD.


Subject(s)
Adenosine Triphosphate/metabolism , Choanal Atresia/genetics , Chromosomal Proteins, Non-Histone/chemistry , Chromosomal Proteins, Non-Histone/metabolism , Eye Diseases/pathology , Microphthalmos/genetics , Muscular Dystrophy, Facioscapulohumeral/genetics , Mutation, Missense , Nose/abnormalities , Adenosine Triphosphatases , Amino Acid Sequence , Animals , Choanal Atresia/pathology , Chromosomal Proteins, Non-Histone/genetics , Crystallography, X-Ray , Eye Diseases/genetics , Eye Diseases/metabolism , Humans , Mice , Microphthalmos/pathology , Muscular Dystrophy, Facioscapulohumeral/pathology , Nose/pathology , Protein Conformation , Protein Domains , Sequence Homology , Xenopus laevis
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