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1.
Cell Death Dis ; 15(4): 286, 2024 Apr 23.
Article in English | MEDLINE | ID: mdl-38653992

ABSTRACT

The progression of human degenerative and hypoxic/ischemic diseases is accompanied by widespread cell death. One death process linking iron-catalyzed reactive species with lipid peroxidation is ferroptosis, which shows hallmarks of both programmed and necrotic death in vitro. While evidence of ferroptosis in neurodegenerative disease is indicated by iron accumulation and involvement of lipids, a stable marker for ferroptosis has not been identified. Its prevalence is thus undetermined in human pathophysiology, impeding recognition of disease areas and clinical investigations with candidate drugs. Here, we identified ferroptosis marker antigens by analyzing surface protein dynamics and discovered a single protein, Fatty Acid-Binding Protein 5 (FABP5), which was stabilized at the cell surface and specifically elevated in ferroptotic cell death. Ectopic expression and lipidomics assays demonstrated that FABP5 drives redistribution of redox-sensitive lipids and ferroptosis sensitivity in a positive-feedback loop, indicating a role as a functional biomarker. Notably, immunodetection of FABP5 in mouse stroke penumbra and in hypoxic postmortem patients was distinctly associated with hypoxically damaged neurons. Retrospective cell death characterized here by the novel ferroptosis biomarker FABP5 thus provides first evidence for a long-hypothesized intrinsic ferroptosis in hypoxia and inaugurates a means for pathological detection of ferroptosis in tissue.


Subject(s)
Biomarkers , Fatty Acid-Binding Proteins , Ferroptosis , Neoplasm Proteins , Fatty Acid-Binding Proteins/metabolism , Animals , Humans , Biomarkers/metabolism , Mice , Hypoxia, Brain/metabolism , Hypoxia, Brain/pathology , Mice, Inbred C57BL , Lipid Peroxidation , Male
2.
Nat Commun ; 14(1): 6908, 2023 10 30.
Article in English | MEDLINE | ID: mdl-37903763

ABSTRACT

Ferroptosis is a regulated cell death modality that occurs upon iron-dependent lipid peroxidation. Recent research has identified many regulators that induce or inhibit ferroptosis; yet, many regulatory processes and networks remain to be elucidated. In this study, we performed a chemical genetics screen using small molecules with known mode of action and identified two agonists of the nuclear receptor Farnesoid X Receptor (FXR) that suppress ferroptosis, but not apoptosis or necroptosis. We demonstrate that in liver cells with high FXR levels, knockout or inhibition of FXR sensitized cells to ferroptotic cell death, whereas activation of FXR by bile acids inhibited ferroptosis. Furthermore, FXR inhibited ferroptosis in ex vivo mouse hepatocytes and human hepatocytes differentiated from induced pluripotent stem cells. Activation of FXR significantly reduced lipid peroxidation by upregulating the ferroptosis gatekeepers GPX4, FSP1, PPARα, SCD1, and ACSL3. Together, we report that FXR coordinates the expression of ferroptosis-inhibitory regulators to reduce lipid peroxidation, thereby acting as a guardian of ferroptosis.


Subject(s)
Bile Acids and Salts , Ferroptosis , Animals , Humans , Mice , Bile Acids and Salts/metabolism , Hepatocytes/metabolism , Lipid Peroxidation , Receptors, Cytoplasmic and Nuclear/genetics , Receptors, Cytoplasmic and Nuclear/metabolism
3.
J Hepatol ; 73(6): 1347-1359, 2020 12.
Article in English | MEDLINE | ID: mdl-32598967

ABSTRACT

BACKGROUND & AIMS: Selective elimination of virus-infected hepatocytes occurs through virus-specific CD8 T cells recognizing peptide-loaded MHC molecules. Herein, we report that virus-infected hepatocytes are also selectively eliminated through a cell-autonomous mechanism. METHODS: We generated recombinant adenoviruses and genetically modified mouse models to identify the molecular mechanisms determining TNF-induced hepatocyte apoptosis in vivo and used in vivo bioluminescence imaging, immunohistochemistry, immunoblot analysis, RNAseq/proteome/phosphoproteome analyses, bioinformatic analyses, mitochondrial function tests. RESULTS: We found that TNF precisely eliminated only virus-infected hepatocytes independently of local inflammation and activation of immune sensory receptors. TNF receptor I was equally relevant for NF-kB activation in healthy and infected hepatocytes, but selectively mediated apoptosis in infected hepatocytes. Caspase 8 activation downstream of TNF receptor signaling was dispensable for apoptosis in virus-infected hepatocytes, indicating an unknown non-canonical cell-intrinsic pathway promoting apoptosis in hepatocytes. We identified a unique state of mitochondrial vulnerability in virus-infected hepatocytes as the cause for this non-canonical induction of apoptosis through TNF. Mitochondria from virus-infected hepatocytes showed normal biophysical and bioenergetic functions but were characterized by reduced resilience to calcium challenge. In the presence of unchanged TNF-induced signaling, reactive oxygen species-mediated calcium release from the endoplasmic reticulum caused mitochondrial permeability transition and apoptosis, which identified a link between extrinsic death receptor signaling and cell-intrinsic mitochondrial-mediated caspase activation. CONCLUSION: Our findings reveal a novel concept in immune surveillance by identifying a cell-autonomous defense mechanism that selectively eliminates virus-infected hepatocytes through mitochondrial permeability transition. LAY SUMMARY: The liver is known for its unique immune functions. Herein, we identify a novel mechanism by which virus-infected hepatocytes can selectively eliminate themselves through reduced mitochondrial resilience to calcium challenge.


Subject(s)
Caspase 8/metabolism , Hepatocytes , Mitochondria, Liver , Receptors, Tumor Necrosis Factor, Type I/metabolism , Animals , Apoptosis/immunology , Calcium Signaling , Cells, Cultured , Hepatocytes/metabolism , Hepatocytes/virology , Humans , Mice , Mitochondria, Liver/immunology , Mitochondria, Liver/metabolism , Mitochondrial Transmembrane Permeability-Driven Necrosis , Signal Transduction , Tumor Necrosis Factor-alpha/metabolism
4.
ACS Cent Sci ; 6(1): 41-53, 2020 Jan 22.
Article in English | MEDLINE | ID: mdl-31989025

ABSTRACT

Ferroptosis is an iron-dependent form of regulated cell death linking iron, lipid, and glutathione levels to degenerative processes and tumor suppression. By performing a genome-wide activation screen, we identified a cohort of genes antagonizing ferroptotic cell death, including GTP cyclohydrolase-1 (GCH1) and its metabolic derivatives tetrahydrobiopterin/dihydrobiopterin (BH4/BH2). Synthesis of BH4/BH2 by GCH1-expressing cells caused lipid remodeling, suppressing ferroptosis by selectively preventing depletion of phospholipids with two polyunsaturated fatty acyl tails. GCH1 expression level in cancer cell lines stratified susceptibility to ferroptosis, in accordance with its expression in human tumor samples. The GCH1-BH4-phospholipid axis acts as a master regulator of ferroptosis resistance, controlling endogenous production of the antioxidant BH4, abundance of CoQ10, and peroxidation of unusual phospholipids with two polyunsaturated fatty acyl tails. This demonstrates a unique mechanism of ferroptosis protection that is independent of the GPX4/glutathione system.

5.
Biomed Res Int ; 2020: 5309508, 2020.
Article in English | MEDLINE | ID: mdl-33506007

ABSTRACT

The vocal extent measure (VEM) represents a new diagnostic tool to express vocal capacity by quantifying the dynamic performance and frequency range of voice range profiles (VRPs). For VEM calculation, the VRP area is multiplied by the quotient of the theoretical perimeter of a circle with equal VRP area and the actual VRP perimeter. Since different diseases affect voice function to varying degrees, pathology-related influences on the VEM should be investigated more detailed in this retrospective study, three years after VEM implementation. Data was obtained in a standardized voice assessment comprising videolaryngostroboscopy, voice handicap index (VHI-9i), and acoustic-aerodynamic analysis with automatic calculation of VEM and dysphonia severity index (DSI). The complete dataset comprised 1030 subjects, from which 994 adults (376 male, 618 female; 18-86 years) were analyzed more detailed. The VEM differed significantly between pathology subgroups (p < 0.001) and correlated with the corresponding DSI values. Regarding VHI-9i, the VEM reflected the subjective impairment better than the DSI. We conclude that the VEM proved to be a comprehensible and easy-to-use interval-scaled parameter for objective VRP evaluation in all pathology subgroups. As expected, exclusive consideration of the measured pathology-related influences on the VEM does not allow conclusions regarding the specific underlying diagnosis.


Subject(s)
Phonetics , Voice Disorders/physiopathology , Voice , Adolescent , Adult , Age Distribution , Aged , Aged, 80 and over , Cohort Studies , Dysphonia/physiopathology , Female , Humans , Male , Middle Aged , Regression Analysis , Speech Acoustics , Young Adult
6.
Logoped Phoniatr Vocol ; 45(2): 73-81, 2020 Jul.
Article in English | MEDLINE | ID: mdl-31157590

ABSTRACT

Objective: The recently developed vocal extent measure (VEM) quantifies a patient's vocal capacity as documented in the voice range profile (VRP). This study presents the first reference ranges of the VEM for young subjects without voice complaints. Furthermore, this study investigates the influence of gender on the VEM as well as the correlation of the VEM with the dysphonia severity index (DSI).Patients and methods: Reference ranges were captured by combining a retrospective analysis of subjects who received a medical fitness certificate of a healthy voice (n = 135) and a prospective analysis of adult volunteers without voice complaints (n = 67). Every participant obtained a standardized voice assessment comprising videolaryngostroboscopy, auditory-perceptual analysis, acoustic analysis, VRP, and the Voice Handicap Index (VHI-9i).Results: A total of 202 subjects were recruited and investigated. Due to our stringent selection criteria, 51 participants had to be excluded from further analysis. The remaining data of 151 participants (52 males, 99 females), aged 18-39 years (mean 24, SD 5), were analysed in more detail. The mean of the VEM amounted to 123.7 (SD 12.6) for males and 114.4 (SD 13.3) for females. The values differed significantly between both sexes and correlated significantly with the corresponding DSI values.Conclusion: By introducing the first reference values, this study represents the next step of implementing the VEM in daily phoniatric diagnostics. These values serve as a basis to interpret the VEM regarding the degree of severity of voice disorders and to evaluate treatment success.


Subject(s)
Acoustics , Speech Production Measurement , Voice Quality , Adolescent , Adult , Age Factors , Disability Evaluation , Female , Healthy Volunteers , Humans , Laryngoscopy , Male , Predictive Value of Tests , Prospective Studies , Reference Values , Retrospective Studies , Sex Factors , Speech Production Measurement/standards , Stroboscopy , Surveys and Questionnaires , Video Recording , Young Adult
7.
Faraday Discuss ; 218(0): 9-28, 2019 08 15.
Article in English | MEDLINE | ID: mdl-31317165

ABSTRACT

Understanding complex (bio/geo)systems is a pivotal challenge in modern sciences that fuels a constant development of modern analytical technology, finding innovative solutions to resolve and analyse. In this introductory paper to the Faraday Discussion "Challenges in the analysis of complex natural systems", we aim to present concepts of complexity, and complex chemistry in systems subjected to biotic and abiotic transformations, and introduce the analytical possibilities to disentangle chemical complexity into its elementary parts (i.e. compositional and structural resolution) as a global integrated approach termed systems chemical analytics.

8.
FEMS Microbiol Ecol ; 94(10)2018 10 01.
Article in English | MEDLINE | ID: mdl-30124819

ABSTRACT

Reduced nitrogen species are key nutrients for biological productivity in the oceans. Ammonium is often present in low and growth-limiting concentrations, albeit peaks occur during collapse of algal blooms or via input from deep sea upwelling and riverine inflow. Autotrophic phytoplankton exploit ammonium peaks by storing nitrogen intracellularly. In contrast, the strategy of heterotrophic bacterioplankton to acquire ammonium is less well understood. This study revealed the marine bacterium Phaeobacter inhibens DSM 17395, a Roseobacter group member, to have already depleted the external ammonium when only ∼⅓ of the ultimately attained biomass is formed. This was paralleled by a three-fold increase in cellular nitrogen levels and rapid buildup of various nitrogen-containing intracellular metabolites (and enzymes for their biosynthesis) and biopolymers (DNA, RNA and proteins). Moreover, nitrogen-rich cells secreted potential RTX proteins and the antibiotic tropodithietic acid, perhaps to competitively secure pulses of external ammonium and to protect themselves from predation. This complex response may ensure growing cells and their descendants exclusive provision with internal nitrogen stocks. This nutritional strategy appears prevalent also in other roseobacters from distant geographical provenances and could provide a new perspective on the distribution of reduced nitrogen in marine environments, i.e. temporary accumulation in bacterioplankton cells.


Subject(s)
Ammonium Compounds/metabolism , Nitrogen/metabolism , Plankton/metabolism , Roseobacter/metabolism , Seawater/microbiology , Ammonium Compounds/analysis , Anti-Bacterial Agents/metabolism , Bacterial Proteins/metabolism , Biomass , Heterotrophic Processes , Plankton/chemistry , Roseobacter/chemistry , Seawater/chemistry , Tropolone/analogs & derivatives , Tropolone/metabolism
9.
Biomed Res Int ; 2018: 3836714, 2018.
Article in English | MEDLINE | ID: mdl-29686998

ABSTRACT

Voice range profile (VRP) and evaluation using the dysphonia severity index (DSI) represent essentials of instrument-based objective voice diagnostics and are implemented in different standardized registration programs. The respective measurement results, however, show differences. The aim of the study was to prove these differences statistically and to develop a new parameter, the Vocal Extent Measure (VEM), which is not influenced by the measurement program. VRPs of 97 subjects were recorded by two examiners using the established registration programs DiVAS (XION medical) and LingWAVES (WEVOSYS) simultaneously. The VEM was developed on the basis of VRP area and perimeter. All 194 VRP files were analyzed for various parameters and gender independence. The registration programs exhibited significant differences in several vocal parameters. A significant gender influence for DSI was found with DiVAS (p < 0.01), but not with LingWAVES. The VEM quantified the dynamic performance and frequency range by a unidimensional, interval-scaled value without unit, mostly between 0 and 120. This novel parameter represents an intelligible and user-friendly positive measure of vocal function, allows simple and stable VRP description, and seems to be suitable for quantification of vocal capacity. In contrast to DSI, the VEM proved to be less susceptible to registration program and gender.


Subject(s)
Dysphonia/diagnosis , Dysphonia/pathology , Voice/physiology , Acoustics , Adolescent , Adult , Aged , Child , Female , Humans , Laryngoscopy/methods , Male , Middle Aged , Phonation/physiology , Speech Acoustics , Young Adult
10.
Swiss Dent J ; 127(10): 876-883, 2017.
Article in French | MEDLINE | ID: mdl-29199420

ABSTRACT

Cet article se focalise sur le traitement parodontal des atteintes de furcation des molaires. La décision thérapeutique est difficile car de nombreux facteurs doiv ent être pris en considération. L'objectif thérapeutique est de rétablir sans restriction le contrôle optimal de la plaque dans toutes les niches inaccessibles résultant de la perte d'attache au niveau de la furcation. La tunnélisation est l'une des options thérapeutiques possibles. Selon l'indication, elle est eff ectuée non chirurgicalement (scaling [surf açage, détartrage ou cure- tage] fermé et lissage de la racine), ou chirurgicalement (scaling ouvert et lissage de la racine, ostéo et/ ou odontoplastie). Ces méthodes de tunnélisation se caractérisent par le fait que les tissus mous et, le cas échéant, les tissus durs de la furcation sont ouverts, afin de la rendre accessible aux brossettes interdentaires. Pour ce faire, des ligatures en caoutchouc peuvent être utilisées comme mo yen auxiliaire. Dans le cadre du traitement non chirurgical, ces ligatures en caoutchouc pro voquent un déplacement des tissus mous au cours de l'interposition d'une durée de sept jours dans une atteinte de furcation de degré III. Dans le cadre de la tunnélisation chirurgicale, ces ligatures en caoutchouc peuvent être utilisées comme adjuvant pour maintenir la furcation ouverte pendant la phase de cicatrisation postopératoire. La systématisation des méthodes de tunnélisation utilisant ces ligatures en caoutchouc est décrite sur la base de quatre ex emples cliniques, avec présentation des conclusions à tirer pour la pratique.

12.
Article in English | MEDLINE | ID: mdl-29259924

ABSTRACT

Effective growth and replication of obligate intracellular pathogens depend on host cell metabolism. How this is connected to host cell mitochondrial function has not been studied so far. Recent studies suggest that growth of intracellular bacteria such as Chlamydia pneumoniae is enhanced in a low oxygen environment, arguing for a particular mechanistic role of the mitochondrial respiration in controlling intracellular progeny. Metabolic changes in C. pneumoniae infected epithelial cells were analyzed under normoxic (O2 ≈ 20%) and hypoxic conditions (O2 < 3%). We observed that infection of epithelial cells with C. pneumoniae under normoxia impaired mitochondrial function characterized by an enhanced mitochondrial membrane potential and ROS generation. Knockdown and mutation of the host cell ATP synthase resulted in an increased chlamydial replication already under normoxic conditions. As expected, mitochondrial hyperpolarization was observed in non-infected control cells cultured under hypoxic conditions, which was beneficial for C. pneumoniae growth. Taken together, functional and genetically encoded mitochondrial dysfunction strongly promotes intracellular growth of C. pneumoniae.


Subject(s)
Chlamydophila pneumoniae/growth & development , Chlamydophila pneumoniae/pathogenicity , Epithelial Cells/microbiology , Host-Pathogen Interactions/physiology , Mitochondria/microbiology , Mitochondria/physiology , Cell Line , Chlamydophila pneumoniae/metabolism , DNA, Bacterial/genetics , DNA, Bacterial/isolation & purification , Gene Expression Profiling , Genes, Bacterial/genetics , Humans , Hypoxia , Membrane Potential, Mitochondrial/physiology , Oxygen/metabolism , RNA Interference , Reactive Oxygen Species/metabolism
13.
Mar Drugs ; 15(3)2017 Mar 20.
Article in English | MEDLINE | ID: mdl-28335513

ABSTRACT

Marine algae represent an important source of novel natural products. While their bioactive potential has been studied to some extent, limited information is available on marine algae from the Red Sea. This study aimed at the broad discovery of new bioactivities from a collection of twelve macroalgal species from the Central Red Sea. We used imaging-based High-Content Screening (HCS) with a diverse spectrum of cellular markers for detailed cytological profiling of fractionated algal extracts. The cytological profiles for 3 out of 60 algal fractions clustered closely to reference inhibitors and showed strong inhibitory activities on the HIV-1 reverse transcriptase in a single-enzyme biochemical assay, validating the suggested biological target. Subsequent chemical profiling of the active fractions of two brown algal species by ultra-high resolution mass spectrometry (FT-ICR-MS) revealed possible candidate molecules. A database query of these molecules led us to groups of compounds with structural similarities, which are suggested to be responsible for the observed activity. Our work demonstrates the versatility and power of cytological profiling for the bioprospecting of unknown biological resources and highlights Red Sea algae as a source of bioactives that may serve as a starting point for further studies.


Subject(s)
Biological Products/chemistry , Seaweed/chemistry , Biological Products/pharmacology , HIV Reverse Transcriptase/antagonists & inhibitors , Indian Ocean , Mass Spectrometry/methods , Saudi Arabia
14.
J Allergy Clin Immunol ; 139(5): 1525-1535, 2017 May.
Article in English | MEDLINE | ID: mdl-27670239

ABSTRACT

BACKGROUND: Chronic immune diseases, such as asthma, are highly prevalent. Currently available pharmaceuticals improve symptoms but cannot cure the disease. This prompted demands for alternatives to pharmaceuticals, such as probiotics, for the prevention of allergic disease. However, clinical trials have produced inconsistent results. This is at least partly explained by the highly complex crosstalk among probiotic bacteria, the host's microbiota, and immune cells. The identification of a bioactive substance from probiotic bacteria could circumvent this difficulty. OBJECTIVE: We sought to identify and characterize a bioactive probiotic metabolite for potential prevention of allergic airway disease. METHODS: Probiotic supernatants were screened for their ability to concordantly decrease the constitutive CCL17 secretion of a human Hodgkin lymphoma cell line and prevent upregulation of costimulatory molecules of LPS-stimulated human dendritic cells. RESULTS: Supernatants from 13 of 37 tested probiotic strains showed immunoactivity. Bioassay-guided chromatographic fractionation of 2 supernatants according to polarity, followed by total ion chromatography and mass spectrometry, yielded C11H12N2O2 as the molecular formula of a bioactive substance. Proton nuclear magnetic resonance and enantiomeric separation identified D-tryptophan. In contrast, L-tryptophan and 11 other D-amino acids were inactive. Feeding D-tryptophan to mice before experimental asthma induction increased numbers of lung and gut regulatory T cells, decreased lung TH2 responses, and ameliorated allergic airway inflammation and hyperresponsiveness. Allergic airway inflammation reduced gut microbial diversity, which was increased by D-tryptophan. CONCLUSIONS: D-tryptophan is a newly identified product from probiotic bacteria. Our findings support the concept that defined bacterial products can be exploited in novel preventative strategies for chronic immune diseases.


Subject(s)
Asthma/immunology , Cytokines/immunology , Gastrointestinal Microbiome/immunology , Probiotics , Tryptophan/biosynthesis , Animals , Bacteria/metabolism , Cell Line, Tumor , Cells, Cultured , Dendritic Cells , Female , Humans , Lipopolysaccharides , Mice, Inbred BALB C
15.
Plant Physiol ; 168(3): 859-70, 2015 Jul.
Article in English | MEDLINE | ID: mdl-25975835

ABSTRACT

Isoprene is a small lipophilic molecule with important functions in plant protection against abiotic stresses. Here, we studied the lipid composition of thylakoid membranes and chloroplast ultrastructure in isoprene-emitting (IE) and nonisoprene-emitting (NE) poplar (Populus × canescens). We demonstrated that the total amount of monogalactosyldiacylglycerols, digalactosyldiacylglycerols, phospholipids, and fatty acids is reduced in chloroplasts when isoprene biosynthesis is blocked. A significantly lower amount of unsaturated fatty acids, particularly linolenic acid in NE chloroplasts, was associated with the reduced fluidity of thylakoid membranes, which in turn negatively affects photosystem II photochemical efficiency. The low photosystem II photochemical efficiency in NE plants was negatively correlated with nonphotochemical quenching and the energy-dependent component of nonphotochemical quenching. Transmission electron microscopy revealed alterations in the chloroplast ultrastructure in NE compared with IE plants. NE chloroplasts were more rounded and contained fewer grana stacks and longer stroma thylakoids, more plastoglobules, and larger associative zones between chloroplasts and mitochondria. These results strongly support the idea that in IE species, the function of this molecule is closely associated with the structural organization and functioning of plastidic membranes.


Subject(s)
Butadienes/metabolism , Gene Knockdown Techniques , Hemiterpenes/metabolism , Lipids/chemistry , Pentanes/metabolism , Populus/metabolism , Populus/ultrastructure , Thylakoids/metabolism , Thylakoids/ultrastructure , Chlorophyll/metabolism , Fatty Acids/metabolism , Fluorescence , Least-Squares Analysis , Malondialdehyde/metabolism , Models, Biological , Multivariate Analysis , Oxidation-Reduction , Photosynthesis , Photosystem II Protein Complex/metabolism , Plant Proteins/metabolism
16.
Rapid Commun Mass Spectrom ; 28(15): 1735-44, 2014 Aug 15.
Article in English | MEDLINE | ID: mdl-24975254

ABSTRACT

RATIONALE: The ionization of neutral diacylglycerols (DAGs) by electrospray ionization mass spectrometry (ESI-MS) is challenging compared with other lipid classes which possess ionic head group conjugations. Although ESI-MS is the method of choice in lipidomic analysis, it is questionable whether all lipid classes can be efficiently ionized by this method. Actually, various lipids were not efficiently detected (due to poor ionization) in many studies which claimed to comprehensively describe lipid profiles. Since neutral lipids are precursors for the biosynthesis of most other lipid classes, the necessity for improved or alternative ionization and identification schemes becomes obvious. METHODS: We identified the 1,2-diacylglycerol (DAG) dimer ion formation in the gas phase by ultra-high-resolution Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) in negative electrospray ionization ((-)ESI) mode. The geometry of the dimer ion was investigated by accurate density functional theory (DFT) calculations at the B3LYP/6-311+G(d)//B3LYP/LANL2DZ level of theory. Fragmentation of the dimer ions of many investigated DAGs has been achieved via collision-induced dissociation (CID) experiments with several elevated collision energies (0-12 eV). RESULTS: We revealed the possibility to ionize neutral DAGs as dimer ions in the negative ESI mode. Quantum mechanical calculations revealed a polar head-to-head intermolecular interaction between one charged DAG and one DAG neutral. This represents an energy minimum structure for the DAG dimer ions. We could furthermore detect CID fragmentation product ions that can only result from intermolecular reactions in this head-to-head conformation (SN2 nucleophilic substitution reactions inside the dimer DAG ion). CONCLUSIONS: Here, we present for the first time the opportunity to ionize and identify DAGs as dimer ions. This new finding provides a new alternative for investigations of important diacylglycerol lipids and provides the opportunity to obtain complementary and more comprehensive results in future lipidomic studies.


Subject(s)
Cyclotrons , Diglycerides/analysis , Diglycerides/chemistry , Models, Chemical , Spectrometry, Mass, Electrospray Ionization/methods , Spectroscopy, Fourier Transform Infrared/methods , Computer Simulation , Dimerization , Ions/chemical synthesis
17.
PLoS One ; 9(1): e87487, 2014.
Article in English | MEDLINE | ID: mdl-24489923

ABSTRACT

Global HIV-1 treatment would benefit greatly from safe herbal medicines with scientifically validated novel anti-HIV-1 activities. The root extract from the medicinal plant Pelargonium sidoides (PS) is licensed in Germany as the herbal medicine EPs®7630, with numerous clinical trials supporting its safety in humans. Here we provide evidence from multiple cell culture experiments that PS extract displays potent anti-HIV-1 activity. We show that PS extract protects peripheral blood mononuclear cells and macrophages from infection with various X4 and R5 tropic HIV-1 strains, including clinical isolates. Functional studies revealed that the extract from PS has a novel mode-of-action. It interferes directly with viral infectivity and blocks the attachment of HIV-1 particles to target cells, protecting them from virus entry. Analysis of the chemical footprint of anti-HIV activity indicates that HIV-1 inhibition is mediated by multiple polyphenolic compounds with low cytotoxicity and can be separated from other extract components with higher cytotoxicity. Based on our data and its excellent safety profile, we propose that PS extract represents a lead candidate for the development of a scientifically validated herbal medicine for anti-HIV-1 therapy with a mode-of-action different from and complementary to current single-molecule drugs.


Subject(s)
Anti-HIV Agents/pharmacology , HIV-1/drug effects , Pelargonium/chemistry , Plant Extracts/pharmacology , Plant Roots/chemistry , Virus Attachment/drug effects , Anti-HIV Agents/chemistry , Anti-HIV Agents/isolation & purification , Drug Evaluation, Preclinical , HEK293 Cells , HIV Infections/drug therapy , Humans , Plant Extracts/chemistry , Plant Extracts/isolation & purification , Plants, Medicinal/chemistry , Polyphenols/chemistry , Polyphenols/isolation & purification , Polyphenols/pharmacology
18.
PLoS One ; 9(1): e86196, 2014.
Article in English | MEDLINE | ID: mdl-24465954

ABSTRACT

Chlamydia trachomatis is an obligate intracellular pathogen responsible for loss of eyesight through trachoma and for millions of cases annually of sexually transmitted diseases. The bacteria develop within a membrane-bounded inclusion. They lack enzymes for several biosynthetic pathways, including those to make some phospholipids, and exploit their host to compensate. Three-dimensional fluorescence microscopy demonstrates that small organelles of the host, peroxisomes, are translocated into the Chlamydia inclusion and are found adjacent to the bacteria. In cells deficient for peroxisome biogenesis the bacteria are able to multiply and give rise to infectious progeny, demonstrating that peroxisomes are not essential for bacterial development in vitro. Mass spectrometry-based lipidomics reveal the presence in C. trachomatis of plasmalogens, ether phospholipids whose synthesis begins in peroxisomes and have never been described in aerobic bacteria before. Some of the bacterial plasmalogens are novel structures containing bacteria-specific odd-chain fatty acids; they are not made in uninfected cells nor in peroxisome-deficient cells. Their biosynthesis is thus accomplished by the metabolic collaboration of peroxisomes and bacteria.


Subject(s)
Chlamydia trachomatis/physiology , Peroxisomes/enzymology , Plasmalogens/biosynthesis , Fibroblasts/microbiology , HeLa Cells , Host-Pathogen Interactions , Humans , Peroxisomes/microbiology
19.
J Chromatogr A ; 1324: 109-14, 2014 Jan 10.
Article in English | MEDLINE | ID: mdl-24315356

ABSTRACT

The growing scientific attention in the biological function of D-amino acids leads to an increasing analytical interest for enantiomeric amino acid separation, which is still very challenging due to the lack of sufficiently sensitive, high-throughput analytical methods that can cope with often occurring matrix interferences and very low D-amino acid concentrations. Here, enantioseparation can benefit from improved resolution and chromatographic speed offered by modern UHPLC techniques and the precision of MS detection. We developed a RP-UHPLC-QqToF-MS method using pre-column OPA/IBLC derivatization for very precise discrimination of amino acids enantiomers. The method shows a superb sensitivity with limits of detection in the range of several pmol/l. It has neither shown matrix inferences in the tested very complex biological matrices (serum, plasma, urine and gut) nor stability or racemization problems.


Subject(s)
Amino Acids/analysis , Chromatography, High Pressure Liquid/methods , Mass Spectrometry/methods , Amino Acids/chemistry , Animals , Humans , Intestines/chemistry , Limit of Detection , Mice , Stereoisomerism
20.
PLoS Pathog ; 9(8): e1003553, 2013.
Article in English | MEDLINE | ID: mdl-23950718

ABSTRACT

The Chlamydiae are a highly successful group of obligate intracellular bacteria, whose members are remarkably diverse, ranging from major pathogens of humans and animals to symbionts of ubiquitous protozoa. While their infective developmental stage, the elementary body (EB), has long been accepted to be completely metabolically inert, it has recently been shown to sustain some activities, including uptake of amino acids and protein biosynthesis. In the current study, we performed an in-depth characterization of the metabolic capabilities of EBs of the amoeba symbiont Protochlamydia amoebophila. A combined metabolomics approach, including fluorescence microscopy-based assays, isotope-ratio mass spectrometry (IRMS), ion cyclotron resonance Fourier transform mass spectrometry (ICR/FT-MS), and ultra-performance liquid chromatography mass spectrometry (UPLC-MS) was conducted, with a particular focus on the central carbon metabolism. In addition, the effect of nutrient deprivation on chlamydial infectivity was analyzed. Our investigations revealed that host-free P. amoebophila EBs maintain respiratory activity and metabolize D-glucose, including substrate uptake as well as host-free synthesis of labeled metabolites and release of labeled CO2 from (13)C-labeled D-glucose. The pentose phosphate pathway was identified as major route of D-glucose catabolism and host-independent activity of the tricarboxylic acid (TCA) cycle was observed. Our data strongly suggest anabolic reactions in P. amoebophila EBs and demonstrate that under the applied conditions D-glucose availability is essential to sustain metabolic activity. Replacement of this substrate by L-glucose, a non-metabolizable sugar, led to a rapid decline in the number of infectious particles. Likewise, infectivity of Chlamydia trachomatis, a major human pathogen, also declined more rapidly in the absence of nutrients. Collectively, these findings demonstrate that D-glucose is utilized by P. amoebophila EBs and provide evidence that metabolic activity in the extracellular stage of chlamydiae is of major biological relevance as it is a critical factor affecting maintenance of infectivity.


Subject(s)
Acanthamoeba/microbiology , Chlamydiales/metabolism , Citric Acid Cycle/physiology , Glucose/metabolism , Oxygen Consumption/physiology , Pentose Phosphate Pathway/physiology , Acanthamoeba/metabolism , Acanthamoeba/ultrastructure , Chlamydia trachomatis/metabolism , Chlamydia trachomatis/pathogenicity , Chlamydia trachomatis/ultrastructure , Chlamydiales/ultrastructure , HeLa Cells , Humans , Symbiosis/physiology
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