Tracking the hologenome dynamics in aquatic invertebrates by the holo-2bRAD approach.

The "hologenome" concept is an increasingly popular way of thinking about microbiome-host for marine organisms. However, it is challenging to track hologenome dynamics because of the large amount of material, with tracking itself usually resulting in damage or death of the research object. Here we show the simple and efficient holo-2bRAD approach for the tracking of hologenome dynamics in marine invertebrates (i.e., scallop and shrimp) from one holo-2bRAD library. The stable performance of our approach was shown with high genotyping accuracy of 99.91% and a high correlation of r > 0.99 for the species-level profiling of microorganisms. To explore the host-microbe association underlying mass mortality events of bivalve larvae, core microbial species changed with the stages were found, and two potentially associated host SNPs were identified. Overall, our research provides a powerful tool with various advantages (e.g., cost-effective, simple, and applicable for challenging samples) in genetic, ecological, and evolutionary studies.

The Immunomodulation Role of Vaginal Microenvironment On Human Papillomavirus Infection.

BACKGROUND: Evidence suggests the role of the vaginal microbiome and microenvironment in the immunity state. The human papillomavirus (HPV) infection is widely dependent on the healthy vaginal microenvironment. Hence, this study aimed to investigate the role of the vaginal microenvironment in the rate of high-risk HPV (hr-HPV) infection. MATERIALS AND METHODS: This cross-sectional study was performed on 512 women with hr-HPV positive (n=212) or negative (n=300) infection. The vaginal samples of women were examined regarding yeas and Gardnerella vaginalis infection. Also, Lactobacillus acidophilus, pH, and enzyme activity (such as catalase, proline aminopeptidase, and leucocyte esterase) were compared between the two groups. Also, the histopathological study was performed on the vaginal samples. RESULTS: The higher rate of yeast and G. vaginalis infections as well as decreased L. acidophilus, were significantly observed in women with hr-HPV positive infection (P0.001). Also, histopathological findings indicated that cervical intraepithelial neoplasia grade I-III and cervical cancer lesions were markedly higher in hr-HPV positive group compared with control women. CONCLUSION: The hr-HPV infection was markedly correlated to vaginal microenvironments, and it could a risk factor for the elevation of the rate of high-grade cervical lesions.

Study on the Effect of B-Ultrasound NT Scan in Early Pregnancy Combined with Serum Screening in Early and Middle Pregnancy for Down Syndrome.

Objective: Down syndrome (DS), also known as trisomy 21 syndrome, is a common and most harmful congenital chromosomal genetic disease. This study is aimed at exploring the effect of B-ultrasound NT scan in early pregnancy combined with serum screening in early and middle pregnancy for Down syndrome. Methods: A total of 168 pregnant women who were diagnosed and treated in the obstetric clinic of our hospital from January 2019 to December 2021 were selected as the research objects. B-ultrasound NT scanning and serum detection in the early and middle trimester of pregnancy were performed, respectively. The accuracy of single detection and combined detection was analyzed and compared with the results of amniotic fluid cell chromosome examination as the gold standard. Results: There were 4 cases of DS and 165 cases of non-DS. The serum PAPP-A, AFP, and UE levels in DS group were lower than those in non-DS group. ß-HCG level and NT value were higher than those in non-DS group (all p < 0.05). Among 168 pregnant women, 5 cases were diagnosed as abnormal by ultrasonography, and 1 case was diagnosed as normal. By serological test, 20 cases with high risk of DS were diagnosed in 4 cases, and 148 cases with low risk of DS were diagnosed in 2 cases. Among 168 cases examined by serology combined with ultrasound, 10 cases with high risk of DS were found, and 4 cases were diagnosed; 158 cases had low risk of DS, and 0 cases were diagnosed. The negative predictive value, specificity, and coincidence rate of DS screening by the three methods were higher, and the positive predictive value and coincidence rate of combined screening were the highest (p < 0.05). The screening risk of Down syndrome was correlated with pregnancy outcome. The abnormal pregnancy rate in high-risk group was significantly higher than that in low-risk group, and the difference was statistically significant (p < 0.05). ROC curve showed that the sensitivity, specificity, and AUC of the combined detection were greater than those of serology and NT. Conclusion: The application of B-ultrasound NT scan in early pregnancy combined with early and mid-term serum comprehensive screening in the screening of Down's infants is helpful to improve the diagnostic coincidence rate and reduce the occurrence of misdiagnosis.

Durable, cost-effective and superhydrophilic chitosan-alginate hydrogel-coated mesh for efficient oil/water separation.

Hydrogels with low-adhesive superoleophobicity are ideal candidates for modifying filtration substrates to achieve efficient and antifouling oil/water separation. However, there are still some unfavorable factors hindering their practical application, including expensive raw materials, complex fabrication process, poor stability and durability. In this work, a durable, cost-effective and superhydrophilic chitosan-alginate (CS-ALG) hydrogel coated mesh was developed by a facile, two-step dip-coating method for efficient oil/water separation in hypersaline environments. By integrating polysaccharide-based superhydrophobic surfaces and the hierarchical micro-/nanostructures, the as-fabricated CS-ALG hydrogel coated mesh exhibits excellent underwater superoleophobicity and anti-oil-fouling performance. Benefiting from that, the mesh could separate various oil/water mixtures with high separation efficiency (> 99%). It is worth mentioning that the double-cross-linked CS-ALG hydrogel based on sequential electrostatic interaction and ionic cross-linking shows excellent durability in hypersaline environments. All these attractive advantages make the hydrogel-coated mesh a promising candidate for oily wastewater treatment and oil spill cleanup.

Sequencing-Based Transcriptome-Wide Targeted Genotyping for Evolutionary and Ecological Studies.

Transcriptome-wide targeted genotyping is highly attractive for evolutionary and ecological studies but, until recently, accomplishing this goal presented a major technical barrier for the study of non-model organisms. Our group has recently developed a high-throughput targeted genotyping approach (called HD-Marker) based on the high specificity and accuracy of oligo extension-ligation assays that facilitates the design of assays tailored to meet specific genotyping needs. HD-Marker allows for targeted genotyping of over 10 000 genes in a single tube, with strikingly high capture rate (98%-99%) and genotyping accuracy (97%-99%). With the remarkable advantages of cost-effectiveness and flexibility, we envision that HD-Marker has broad application potential in evolutionary and ecological studies.

[Enhanced Antibiotic Resistant Bacteria Removal from Wastewater Treatment Plant by Different Disinfection Technologies].

Based on the removal of total heterotrophic bacteria (HPC) and antibiotic resistant bacteria (ARB), including the ampicillin resistant bacteria (AMP), erythromycin resistant bacteria (ERY), tetracycline resistant bacteria (TET), kanamycin resistant bacteria (KAN), and ciprofloxacin resistant bacteria (CIP), this study investigates the enhanced removal performance of ARB by different disinfection technologies. The experimental results showed that ARB removal by ultraviolet (UV) disinfection from the wastewater treatment plant (WWTP) was only 18.2%-40.9% and AMP was the highest in content. ERY could be selectively removed by different disinfection technologies; however, there was no distinguished selective removal performance for other four types of ARB (P<0.05). For ARB, COD and NH4+-N removal, the optimal ozone, chlorination, and UV concentration or dosage were 5.0 mg·L-1, 25.0 mg·L-1, and 45.0 mJ·cm-2, respectively, and the corresponding ARB removal efficiencies were 45.5%-74.5%, 66.1%-85.5%, and 68.6%-85.5%. Furthermore, the combined UV and chlorine treatment could achieve better ARB removal performance.