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1.
Ying Yong Sheng Tai Xue Bao ; 32(2): 618-628, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33650372

ABSTRACT

Southwestern China is an important ecologically resource area and ecologically fragile area in China, which plays an important role in the national project of "Clear Waters and Green Mountains". Based on land use data set with a 1 km spatial resolution and combined with land use transfer matrix, we analyzed the characteristics and driving forces of land use change in Southwest China from 2000 to 2015. Based on the MODIS remote sensing index, we calculated the vegetation coverage in Southwest China using the dimidiate pixel model, and analyzed the changes of the normalized vegetation index (NDVI) and vegetation coverage. Results showed that the main land types were woodland, cropland and grassland. The built-up land area increased by 5874 km2(55.8%), the cropland area decreased by 6211 km2, and grassland decreased by 2099 km2. From 2000 to 2015, the area that had been changed to built-up land was the largest, mainly from cropland (contributed 68.2%), woodland (contributed 19.2%) and grassland (contributed 13.1%). The transformed areas were mostly close to urban area. The area and rate for the transformation of cropland were 7079 km2 and 2.2% respectively, accounting for 46.0% of all the transferred out areas. Most of the woodland were transformed from grassland (61.8%), mainly distributed in central and southern Guizhou and western Yunnan. Both NDVI and vegetation coverage were significantly increased, indicating that the whole region was greening. NDVI of both natural vegetation and cropland increased significantly, while the NDVI of areas with expanded build-up land decreased. Therefore, natural vegetation and cropland dominated the vegetation change in this region. Results of the resi-dual analysis showed that both climate change and human activities contributed significantly to the greening trend.


Subject(s)
Climate Change , Environmental Monitoring , China , Forests , Human Activities , Humans
2.
Nucleic Acids Res ; 46(3): 1486-1500, 2018 02 16.
Article in English | MEDLINE | ID: mdl-29202194

ABSTRACT

The Saccharomyces cerevisiae Pif1 protein (ScPif1p) is the prototypical member of the Pif1 family of DNA helicases. ScPif1p is involved in the maintenance of mitochondrial, ribosomal and telomeric DNA and suppresses genome instability at G-quadruplex motifs. Here, we report the crystal structures of a truncated ScPif1p (ScPif1p237-780) in complex with different ssDNAs. Our results have revealed that a yeast-specific insertion domain protruding from the 2B domain folds as a bundle bearing an α-helix, α16. The α16 helix regulates the helicase activities of ScPif1p through interactions with the previously identified loop3. Furthermore, a biologically relevant dimeric structure has been identified, which can be further specifically stabilized by G-quadruplex DNA. Basing on structural analyses and mutational studies with DNA binding and unwinding assays, a potential G-quadruplex DNA binding site in ScPif1p monomers is suggested. Our results also show that ScPif1p uses the Q-motif to preferentially hydrolyze ATP, and a G-rich tract is preferentially recognized by more residues, consistent with previous biochemical observations. These findings provide a structural and mechanistic basis for understanding the multifunctional ScPif1p.


Subject(s)
Adenosine Triphosphate/chemistry , DNA Helicases/chemistry , DNA, Fungal/chemistry , DNA, Single-Stranded/chemistry , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae/enzymology , Adenosine Triphosphate/metabolism , Amino Acid Sequence , Binding Sites , Cloning, Molecular , Crystallography, X-Ray , DNA Helicases/genetics , DNA Helicases/metabolism , DNA, Fungal/genetics , DNA, Fungal/metabolism , DNA, Single-Stranded/genetics , DNA, Single-Stranded/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , G-Quadruplexes , Gene Expression , Hydrolysis , Kinetics , Molecular Docking Simulation , Molecular Dynamics Simulation , Protein Binding , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Protein Interaction Domains and Motifs , Protein Multimerization , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae Proteins/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Substrate Specificity , Thermodynamics
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