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1.
Int J Surg Case Rep ; 120: 109850, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38838585

ABSTRACT

INTRODUCTION AND IMPORTANCE: After strabismus surgery, infections and complications are uncommon but avoidable with the right aseptic measures. Rarely have cases of non-infectious sub-tenon abscesses been documented in the past; these cases need to be appropriately recognized and treated. CASE PRESENTATION: In this report we describe a case of bilateral sub-tenon abscess 4 weeks after medial rectus recession. Despite receiving topical antibiotics for 7 days, there was no improvement, and multiple conjunctival cultures and sensitivity showed no growth. Both eye's sub-tenon abscess was drained, irrigated with gentamicin, and the fragile suture was removed. CLINICAL DISCUSSION: Sub-tenon abscess has been associated with bacterial infection which has more sever presentation. Several facts, including the lack of organisms in the pre-operative and intraoperative cultures, the presence of big cells resembling foreign bodies, and the improvement that occurred after suture extrusion, make infection unlikely in this case. CONCLUSION: We concluded that suture reaction is most likely to be responsible for a late-onset sub-tenon abscess with a negative culture and no response to antibiotics, and the suture should be removed.

2.
J Virol ; 96(20): e0140822, 2022 10 26.
Article in English | MEDLINE | ID: mdl-36214578

ABSTRACT

Rotaviruses are the most common viral agents associated with foal diarrhea. Between 2014 and 2017, the annual prevalence of rotavirus in diarrheic foals ranged between 18 and 28% in Haryana (India). Whole-genome sequencing of two equine rotavirus A (ERVA) isolates (RVA/Horse-wt/IND/ERV4/2017 and RVA/Horse-wt/IND/ERV6/2017) was carried out to determine the genotypic constellations (GCs) of ERVAs. The GCs of both the isolates were G3-P[3]-I8-R3-C3-M3-A9-N3-T3-E3-H6, a unique combination reported for ERVAs so far. Both the isolates carried VP6 of genotype I8, previously unreported from equines. Upon comparison with RVAs of other species, the GC of both isolates was identical to that of a bat rotavirus strain, MSLH14, isolated from China in 2012. The nucleotide sequences of the genes encoding VP3, NSP2, and NSP3 shared >95.81% identity with bat RVA strains isolated from Africa (Gabon). The genes encoding VP1, VP2, VP7, NSP1, and NSP4 shared 94.82% to 97.12% nucleotide identities with the human strains which have zoonotic links to bats (RCH272 and MS2015-1-0001). The VP6 genes of both strains were distinct and had the highest similarity of only 87.08% with that of CMH222, a human strain of bat origin. The phylogenetic analysis and lineage studies revealed that VP7 of both isolates clustered in a new lineage (lineage X) of the G3 genotype with bat, human, and alpaca strains. Similarly, VP4 clustered in a distinct P[3] lineage. These unusual findings highlight the terra incognita of the genomic diversity of equine rotaviruses and support the need for the surveillance of RVAs in animals and humans with a "one health" approach. IMPORTANCE Rotaviruses are globally prevalent diarrheal pathogens in young animals including foals, piglets, calves, goats, sheep, cats, and dogs along with humans. The genome of rotaviruses consists of 11 segments, which enables them to undergo reshuffling by reassortment of segments from multiple species during mixed infections. In this study, the prevalence of equine rotaviruses was 32.11% in organized equine farms of North India. The complete genome analysis of two ERVA isolates revealed an unusual genomic constellation, which was previously reported only in a bat RVA strain. A segment-wise phylogenetic analysis revealed that most segments of both isolates were highly similar either to bat or to bat-like human rotaviruses. The occurrence of unusual bat-like rotaviruses in equines emphasizes the need of extensive surveillance of complete genomes of both animal and human rotaviruses with a "one health" approach.


Subject(s)
Camelids, New World , Chiroptera , Rotavirus Infections , Rotavirus , Animals , Horses/genetics , Humans , Sheep , Swine , Dogs , Chiroptera/genetics , Rotavirus Infections/epidemiology , Rotavirus Infections/veterinary , Rotavirus Infections/genetics , Phylogeny , Genome, Viral , Diarrhea/veterinary , Genotype , Whole Genome Sequencing , Camelids, New World/genetics , Goats/genetics , Nucleotides , Gabon
3.
Optom Vis Sci ; 99(3): 213-227, 2022 03 01.
Article in English | MEDLINE | ID: mdl-35086119

ABSTRACT

SIGNIFICANCE: Binocular treatment for unilateral amblyopia is an emerging treatment that requires evaluation through a randomized clinical trial. PURPOSE: This study aimed to compare change in amblyopic-eye visual acuity (VA) in children aged 4 to 6 years treated with the dichoptic binocular iPad (Apple, Cupertino, CA) game, Dig Rush (not yet commercially available; Ubisoft, Montreal, Canada), plus continued spectacle correction versus continued spectacle correction alone. METHODS: Children (mean age, 5.7 years) were randomly assigned to home treatment for 8 weeks with the iPad game (prescribed 1 h/d, 5 d/wk [n = 92], or continued spectacle correction alone [n = 90]) in a multicenter randomized clinical trial. Before enrollment, children wearing spectacles were required to have at least 16 weeks of wear or no improvement in amblyopic-eye VA (<0.1 logMAR) for at least 8 weeks. Outcome was change in amblyopic-eye VA from baseline to 4 weeks (primary) and 8 weeks (secondary) assessed by masked examiner. RESULTS: A total of 182 children with anisometropic (63%), strabismic (16%; <5∆ near, simultaneous prism and cover test), or combined-mechanism (20%) amblyopia (20/40 to 20/200; mean, 20/63) were enrolled. After 4 weeks, mean amblyopic VA improved by 1.1 logMAR lines with binocular treatment and 0.6 logMAR lines with spectacles alone (adjusted difference, 0.5 lines; 95.1% confidence interval [CI], 0.1 to 0.9). After 8 weeks, results (binocular treatment: mean amblyopic-eye VA improvement, 1.3 vs. 1.0 logMAR lines with spectacles alone; adjusted difference, 0.3 lines; 98.4% CI, -0.2 to 0.8 lines) were inconclusive because the CI included both zero and the pre-defined difference in mean VA change of 0.75 logMAR lines. CONCLUSIONS: In 4- to 6-year-old children with amblyopia, binocular Dig Rush treatment resulted in greater improvement in amblyopic-eye VA for 4 weeks but not 8 weeks. Future work is required to determine if modifications to the contrast increment algorithm or other aspects of the game or its implementation could enhance the treatment effect.


Subject(s)
Amblyopia , Amblyopia/therapy , Child , Child, Preschool , Eyeglasses , Follow-Up Studies , Humans , Sensory Deprivation , Treatment Outcome , Vision, Binocular
4.
Res Rep Urol ; 11: 201-214, 2019.
Article in English | MEDLINE | ID: mdl-31440484

ABSTRACT

BACKGROUND: Kidney stones are considered a serious disease, due to the great discomfort that they can cause and may even lead to renal failure. Dietary habits could be the reason behind stone formation in kidneys. METHODS: Twelve kidney stone samples were collected and analyzed together with typical foodstuffs frequently consumed in the Koya area using the x-ray fluorescent technique. RESULTS: All the analyzed stones were found to be calcium-based. The results show that elements such as Ca, Zr, S and Cl can be regarded as the core elements for the formation of kidney stones in Koya city in north Iraq. CONCLUSION: Many dietary foods and drink frequently consumed by the people in Koya city were observed to contain the core elements. However, more studies are needed to demonstrate if dietary intake may be the main source for kidney stone formation.

5.
J Comp Pathol ; 162: 18-28, 2018 Jul.
Article in English | MEDLINE | ID: mdl-30060839

ABSTRACT

Bluetongue virus (BTV) is neurotropic in nature, especially in ruminant fetuses and in-utero infection results in abortion and congenital brain malformations. The aim of the present study was to compare the neuropathogenicity of major Indian BTV serotypes 1, 2, 10, 16 and 23 by gross and histopathological lesions and virus distribution in experimentally infected neonatal BALB/c mice. Each BTV serotype (20 µl of inoculum containing 1 × 105 tissue culture infectious dose [TCID]50/ml of virus) was inoculated intracerebrally into 3-day-old mice, while a control group was inoculated with mock-infected cell culture medium. Infection with BTV serotypes 1, 2 and 23 led to 65-70% mortality at 7-9 days post infection (dpi) and caused severe necrotizing encephalitis with neurodegenerative changes in neurons, swelling and proliferation of vascular endothelial cells in the cerebral cortex, cerebellum, midbrain and brainstem. In contrast, infection with BTV serotypes 10 and 16 led to 25-30% mortality at 9-11 dpi and caused mild neuropathological lesions. BTV antigen was detected by immunohistochemistry, direct fluorescence antibody technique and confocal microscopy in the cytoplasm of neuronal cells of the hippocampus, grey matter of the cerebral cortex and vascular endothelial cells in the midbrain and brainstem of BTV-1, -2, -10, -16 and -23 infected groups from 3 to 20 dpi. BTV nucleic acid was detected in the infected brain tissues from as early as 24 h up to 20 dpi by VP7 gene segment-based one-step reverse transcriptase polymerase chain reaction. This study of the relative neurovirulence of BTV serotypes is likely to help design suitable vaccination and control strategies for the disease.


Subject(s)
Bluetongue/pathology , Brain/pathology , Brain/virology , Animals , Animals, Newborn , Bluetongue virus , Disease Models, Animal , Mice , Mice, Inbred BALB C , Serogroup
6.
Transbound Emerg Dis ; 65(1): 235-239, 2018 Feb.
Article in English | MEDLINE | ID: mdl-28116836

ABSTRACT

Bluetongue (BT) and peste-des-petits-ruminants (PPR) are major transboundary diseases of small ruminant, which are endemic in India. Testing of bluetongue virus (BTV) and peste-des-petits-ruminants virus (PPRV) from recent outbreaks (2015-2016) in different regions of Haryana State of India revealed that 27.5% of the samples showed the presence of dual infection of BTV and PPRV. Analysis of Seg-2 of BTV (the serotype-determining protein) showed the presence of BTV-12w in several isolates. However, analysis of N gene fragment amplicons showed that viruses belong to lineage IV were most closely related to a pathogenic strain of PPRV from Delhi. This is the first report of co-circulation of PPRV lineage IV and bluetongue virus serotype 12 in the state.


Subject(s)
Bluetongue virus/isolation & purification , Bluetongue/diagnosis , Disease Outbreaks/veterinary , Goat Diseases/virology , Peste-des-Petits-Ruminants/diagnosis , Peste-des-petits-ruminants virus/isolation & purification , Sheep Diseases/virology , Animals , Bluetongue/epidemiology , Bluetongue/virology , Bluetongue virus/genetics , Goat Diseases/epidemiology , Goats , India/epidemiology , Peste-des-Petits-Ruminants/epidemiology , Peste-des-Petits-Ruminants/virology , Peste-des-petits-ruminants virus/genetics , RNA, Viral/genetics , Real-Time Polymerase Chain Reaction/veterinary , Sheep , Sheep Diseases/epidemiology
7.
Transbound Emerg Dis ; 65(2): 547-556, 2018 Apr.
Article in English | MEDLINE | ID: mdl-29120083

ABSTRACT

Bluetongue (BT) is a Culicoides-borne disease caused by several serotypes of bluetongue virus (BTV). Similar to other insect-borne viral diseases, distribution of BT is limited to distribution of Culicoides species competent to transmit BTV. In the tropics, vector activity is almost year long, and hence, the disease is endemic, with the circulation of several serotypes of BTV, whereas in temperate areas, seasonal incursions of a limited number of serotypes of BTV from neighbouring tropical areas are observed. Although BTV is endemic in all the three major tropical regions (parts of Africa, America and Asia) of the world, the distribution of serotypes is not alike. Apart from serological diversity, geography-based diversity of BTV genome has been observed, and this is the basis for proposal of topotypes. However, evolution of these topotypes is not well understood. In this study, we report the isolation and characterization of several BTV-4 isolates from India. These isolates are distinct from BTV-4 isolates from other geographical regions. Analysis of available BTV seg-2 sequences indicated that the Australasian BTV-4 diverged from African viruses around 3,500 years ago, whereas the American viruses diverged relatively recently (1,684 CE). Unlike Australasia and America, BTV-4 strains of the Mediterranean area evolved through several independent incursions. We speculate that independent evolution of BTV in different geographical areas over long periods of time might have led to the diversity observed in the current virus population.


Subject(s)
Bluetongue virus/genetics , Bluetongue virus/isolation & purification , Bluetongue/virology , Sheep Diseases/virology , Africa , Animals , Asia , Australasia , Bluetongue/epidemiology , Electrophoresis, Agar Gel/veterinary , Geography , India/epidemiology , Molecular Epidemiology , RNA, Viral/genetics , Reverse Transcriptase Polymerase Chain Reaction/veterinary , Sequence Analysis, DNA , Serogroup , Sheep , Sheep Diseases/epidemiology
8.
Vet World ; 10(1): 121-129, 2017 Jan.
Article in English | MEDLINE | ID: mdl-28246456

ABSTRACT

AIM: In this study, a planned research work was conducted to investigate the nutrigenomic aspects of supplementation of Allium sativum (garlic) and Ocimum sanctum (holy basil) leaf powder on the growth performance and immune characteristics of broilers. MATERIALS AND METHODS: A 6 weeks feeding trial was conducted with 280-day-old Ven Cobb broilers, distributed randomly into seven experimental groups. Each treatment had 4 replicates with 10 birds each. The birds of the control group (T1) were fed a basal diet formulated as per BIS standards. The broilers of treatment groups T2 and T3 were fed basal diet supplemented with the commercially available garlic powder (GP) at levels of 0.5% and 1.0% of the feed, respectively, while broilers in T4 and T5 were fed basal diet supplemented with commercial grade holy basil leaf powder (HBLP) at levels 0.5% and 1.0% of the feed, respectively. Birds in the T6 were fed with 0.5% GP and 0.5% HBLP, whereas T7 was fed with 1.0% GP and 1.0% HBLP. At the end of the feeding trial (6th week), blood samples were collected and analyzed for relative mRNA expression of toll-like receptors (TLR) 2, TLR 4 and TLR 7 using real-time polymerase chain reaction. RESULTS: The mean body weight gain and feed conversion efficiency were improved (p<0.05) in broilers fed the GP and HBLP incorporated diets compared with the control group. The relative mRNA expression levels of TLR 2, TLR 4 and TLR 7 in the peripheral blood of the broilers were found to be increased (p<0.05) in the birds supplemented with graded levels of the GP and HBLP as compared to the untreated group. CONCLUSION: The present work concludes that the inclusion of GP and HBLP could enhance the production performance and immune status of birds by augmenting the T-cell mediated immune response and thereby protects them from disease without decreasing growth traits as a possible substitution to conventional antimicrobials.

9.
Transbound Emerg Dis ; 64(4): 1120-1132, 2017 Aug.
Article in English | MEDLINE | ID: mdl-26888716

ABSTRACT

Epizootic haemorrhagic disease virus (EHDV) is an emerging arboviral pathogen of wild and domestic ruminants worldwide. It is closely related to bluetongue virus (BTV) and is transmitted by adult females of competent Culicoides vector species. The EHDV genome consists of ten linear double-stranded (ds)RNA segments, encoding five non-structural and seven structural proteins. Genome-segment reassortment contributes to a high level of genetic variation in individual virus strains, particularly in the areas where multiple and distinct virus lineages co-circulate. In spite of the relatively close relationship between BTV and EHDV herd-immunity to BTV does not appear to protect against the introduction and infection of animals by EHDV. Although EHDV can cause up to 80% morbidity in affected animals, vaccination with the homologous EHDV serotype is protective. Outer-capsid protein VP2, encoded by Seg-2, is the most variable of the EHDV proteins and determines both the specificity of reactions with neutralizing antibodies and consequently the identity of the eight EHDV serotypes. In contrast, VP6 (the viral helicase), encoded by Seg-9, is highly conserved, representing a virus species/serogroup-specific antigen. We report the development and evaluation of quantitative (q)RT-PCR assays targeting EHDV Seg-9 that can detect all EHDV strains (regardless of geographic origin/topotype/serotype), as well as type-specific assays targeting Seg-2 of the eight EHDV serotypes. The assays were evaluated using orbivirus isolates from the 'Orbivirus reference collection' (ORC) at The Pirbright Institute and were shown to be EHDV pan-reactive or type-specific. They can be used for rapid, sensitive and reliable detection and identification (typing) of EHDV RNA from infected blood, tissue samples, homogenized Culicoides, or tissue culture supernatant. None of the assays detected RNA from closely related but heterologous orbiviruses, or from uninfected host animals or cell cultures. The techniques presented could be used for both surveillance and vaccine matching (serotype identification) as part of control strategies for incursions in wild and domestic animal species.


Subject(s)
Ceratopogonidae/virology , Hemorrhagic Disease Virus, Epizootic/isolation & purification , Veterinary Medicine/methods , Viral Proteins/genetics , Animals , Polymerase Chain Reaction/veterinary , Reoviridae Infections/diagnosis , Reoviridae Infections/veterinary
10.
Transbound Emerg Dis ; 64(6): 1912-1917, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28004522

ABSTRACT

Bluetongue is endemic in India and has been reported from most Indian states. Of late, the clinical disease is most frequently seen in the states of Andhra Pradesh, Telangana (erstwhile Andhra Pradesh state), Tamil Nadu and Karnataka. Our analysis of diagnostic samples from bluetongue outbreaks during 2010-2011 from the state of Karnataka identified bluetongue virus (BTV) serotype 5 (BTV-5) for the first time in India. One of the diagnostic samples (CH1) and subsequent virus isolate (IND2010/02) contained both BTV-2 and BTV-5. Segment 2 (seg-2) sequence data (400 bp: nucleotides 2538-2921) for IND2010/02-BTV5, showed 94.3% nucleotide identity to BTV-5 from South Africa (Accession no. AJ585126), confirming the virus serotype and also indicating that Seg-2 was derived from a Western topotype, which is in contrast to serotype 2, that belongs to an Eastern topotype. BTV-5 has been recently reported from Africa, China, French islands and the Americas. Although the exact source of the Indian BTV-5 isolate is still to be confirmed, recent identification of additional exotic serotypes in India is of real concern and might add to the severity of the disease seen in these outbreaks.


Subject(s)
Bluetongue virus/immunology , Bluetongue/virology , Disease Outbreaks/veterinary , Animals , Bluetongue/epidemiology , Bluetongue virus/genetics , Bluetongue virus/isolation & purification , Chick Embryo , Coinfection/veterinary , Cricetinae , India/epidemiology , Phylogeny , Sequence Analysis, DNA/veterinary , Serogroup , Sheep
11.
Transbound Emerg Dis ; 63(4): 360-4, 2016 Aug.
Article in English | MEDLINE | ID: mdl-27241307

ABSTRACT

Bluetongue (BT) is a viral disease of ruminants and is caused by different serotypes of bluetongue virus (BTV), which is transmitted by several species of Culicoides midges. The disease is endemic in tropical areas, and incursions have been observed in some of the temperate areas. Twenty-seven recognized serotypes of BTV have been reported so far. Some serotype viruses have been shown to circulate in certain geographical areas. BTV-24 has been reported from Africa, the Mediterranean and the Americas, whereas it is exotic to Australasia. Here, we report isolation of BTV-24 from India and show that it has high sequence homology in genome segment 2 with other Western isolates of BTV-24. Entry of this serotype into Australasian region is a cause of concern.


Subject(s)
Bluetongue virus/classification , Bluetongue virus/isolation & purification , Serogroup , Animals , Australasia/epidemiology , Bluetongue/epidemiology , India/epidemiology
12.
J Virol Methods ; 234: 65-74, 2016 08.
Article in English | MEDLINE | ID: mdl-27054888

ABSTRACT

Bluetongue virus (BTV) infects all ruminants, including cattle, goats and camelids, causing bluetongue disease (BT) that is often severe in naïve deer and sheep. Reverse-transcription-loop-mediated-isothermal-amplification (RT-LAMP) assays were developed to detect eastern or western topotype of BTV strains circulating in India. Each assay uses four primers recognizing six distinct sequences of BTV genome-segment 1 (Seg-1). The eastern (e)RT-LAMP and western (w)RT-LAMP assay detected BTV RNA in all positive isolates that were tested (n=52, including Indian BTV-1, -2, -3, -5, -9, -10, -16, -21 -23, and -24 strains) with high specificity and efficiency. The analytical sensitivity of the RT-LAMP assays is comparable to real-time RT-PCR, but higher than conventional RT-PCR. The accelerated eRT-LAMP and wRT-LAMP assays generated detectable levels of amplified DNA, down to 0.216 fg of BTV RNA template or 108 fg of BTV RNA template within 60-90min respectively. The assays gave negative results with RNA from foot-and-mouth-disease virus (FMDV), peste des petits ruminants virus (PPRV), or DNA from Capripox viruses and Orf virus (n=10), all of which can cause clinical signs similar to BT. Both RT-LAMP assays did not show any cross-reaction among themselves. The assays are rapid, easy to perform, could be adapted as a 'penside' test making them suitable for 'front-line' diagnosis, helping to identify and contain field outbreaks of BTV.


Subject(s)
Bluetongue virus/isolation & purification , Bluetongue/diagnosis , Goat Diseases/diagnosis , Nucleic Acid Amplification Techniques/methods , Real-Time Polymerase Chain Reaction/methods , Animals , Bluetongue/virology , Bluetongue virus/classification , Bluetongue virus/genetics , Cattle , DNA Primers , Genome, Viral , Goat Diseases/virology , Goats/virology , India , Nucleic Acid Amplification Techniques/standards , Peste-des-Petits-Ruminants/diagnosis , Peste-des-Petits-Ruminants/virology , Peste-des-petits-ruminants virus/genetics , Peste-des-petits-ruminants virus/isolation & purification , Real-Time Polymerase Chain Reaction/standards , Sensitivity and Specificity , Sheep/virology , Temperature
13.
Transbound Emerg Dis ; 61(2): 185-92, 2014 Apr.
Article in English | MEDLINE | ID: mdl-23083078

ABSTRACT

African horse sickness (AHS) is associated with high morbidity and mortality in equids, especially horses. A retrospective analysis was carried out concerning 737 AHS outbreaks that occurred during 2007-2010 in Ethiopia. A total of ten outbreaks were investigated in the study period. All four forms of the disease (pulmonary, cardiac, horse sickness fever and the combined form) were observed, with the cardiac form being the most prevalent. Multiple African horse sickness virus serotypes (AHSV-2, AHSV-4, AHSV-6, AHSV-8 and AHSV-9) were detected by molecular methods (type-specific real-time RT-PCR assays), and fourteen isolates were derived from blood and tissue samples collected during 2009-2010. This is the first report of AHSV-4, AHSV-6 or AHSV-8 in Ethiopia.


Subject(s)
African Horse Sickness Virus/isolation & purification , African Horse Sickness/epidemiology , Disease Outbreaks/veterinary , Virus Diseases/veterinary , African Horse Sickness/virology , African Horse Sickness Virus/genetics , African Horse Sickness Virus/immunology , Animals , Antigens, Viral/immunology , DNA, Viral/analysis , Ethiopia/epidemiology , Horses , Retrospective Studies , Reverse Transcriptase Polymerase Chain Reaction/veterinary , Viral Core Proteins/immunology , Virus Diseases/epidemiology , Virus Diseases/virology
14.
Epidemiol Infect ; 140(3): 462-5, 2012 Mar.
Article in English | MEDLINE | ID: mdl-21733265

ABSTRACT

African horse sickness virus serotype 9 (AHSV-9) has been known for some time to be circulating amongst equids in West Africa without causing any clinical disease in indigenous horse populations. Whether this is due to local breeds of horses being resistant to disease or whether the AHSV-9 strains circulating are avirulent is currently unknown. This study shows that the majority (96%) of horses and donkeys sampled across The Gambia were seropositive for AHS, despite most being unvaccinated and having no previous history of showing clinical signs of AHS. Most young horses (<3 years) were seropositive with neutralizing antibodies specific to AHSV-9. Eight young equids (<3 years) were positive for AHSV-9 by serotype-specific RT-PCR and live AHSV-9 was isolated from two of these horses. Sequence analysis revealed the presence of an AHSV-9 strain showing 100% identity to Seg-2 of the AHSV-9 reference strain, indicating that the virus circulating in The Gambia was highly likely to have been derived from a live-attenuated AHSV-9 vaccine strain.


Subject(s)
African Horse Sickness Virus/isolation & purification , African Horse Sickness/epidemiology , Antibodies, Viral/blood , Viral Vaccines , African Horse Sickness Virus/classification , African Horse Sickness Virus/immunology , Animals , Antibodies, Neutralizing/blood , Equidae , Gambia/epidemiology , Horses , RNA, Viral/genetics , RNA, Viral/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, DNA , Sequence Homology , Seroepidemiologic Studies , Serotyping , Vaccines, Attenuated
15.
Epidemiol Infect ; 140(11): 1982-6, 2012 Nov.
Article in English | MEDLINE | ID: mdl-22166372

ABSTRACT

Prior to the recent outbreak of equine encephalosis in Israel in 2009, equine encephalosis virus (EEV) had only been isolated from equids in South Africa. In this study we show the first evidence for the circulation of EEV beyond South Africa in Ethiopia, Ghana and The Gambia, indicating that EEV is likely to be freely circulating and endemic in East and West Africa. Sequence analysis revealed that the EEV isolate circulating in The Gambia was closely related to an EEV isolate that was isolated from a horse from Israel during the EEV outbreak in 2009, indicating that the two viruses have a common ancestry. Interestingly horses in Morocco tested negative for EEV antibodies indicating that the Sahara desert may be acting as a geographical barrier to the spread to the virus to North African countries. This evidence for EEV circulation in countries in East and West Africa sheds light on how the virus may have reached Israel to cause the recent outbreak in 2009.


Subject(s)
Horse Diseases/epidemiology , Orbivirus/isolation & purification , Reoviridae Infections/veterinary , Animals , Antibodies, Viral/blood , Base Sequence , Disease Outbreaks/veterinary , Enzyme-Linked Immunosorbent Assay , Equidae , Ethiopia/epidemiology , Gambia/epidemiology , Ghana/epidemiology , Horse Diseases/virology , Horses , Israel/epidemiology , Molecular Sequence Data , Orbivirus/classification , Orbivirus/genetics , Orbivirus/immunology , Phylogeny , RNA, Viral , Reoviridae Infections/epidemiology , Reoviridae Infections/virology , Reverse Transcriptase Polymerase Chain Reaction , Seroepidemiologic Studies , Serotyping
16.
Virology ; 420(2): 164-71, 2011 Nov 25.
Article in English | MEDLINE | ID: mdl-21968198

ABSTRACT

This paper reports a concatemeric RNA in a strain of epizootic haemorrhagic disease virus (EHDV) serotype 5. Sequencing showed that the concatemeric RNA contains two identical full-length copies of genome segment 9, arranged in series, which has apparently replaced the monomeric form of the segment. In vitro translation demonstrated that the concatemeric RNA can act as a viable template for VP6 translation, but that no double-sized protein is produced. Studies were also performed to assess whether mutations might be easily introduced into the second copy (which might indicate some potential evolutionary significance of a concatemeric RNA segment), however multiple (n=40) passages generated no changes in the sequence of either the upstream or downstream segments. Further, we present results that demonstrate the presence of concatemers or partial gene duplications in multiple segments of different orbiviruses (in tissue culture and purified virus), suggesting their generation is likely to be a normal feature of orbivirus replication.


Subject(s)
Genome, Viral , Hemorrhagic Disease Virus, Epizootic/genetics , Hemorrhagic Disease Virus, Epizootic/physiology , RNA, Viral/chemistry , RNA, Viral/genetics , Virus Replication , Animals , Australia , Base Sequence , Cell Line , Cricetinae , Genes, Viral , Genetic Variation , Nucleic Acid Conformation , Phylogeny , Sequence Analysis, RNA
17.
Res Vet Sci ; 91(3): 486-97, 2011 Dec.
Article in English | MEDLINE | ID: mdl-21074232

ABSTRACT

This study reports on an outbreak of disease that occurred in central Algeria during July 2006. Sheep in the affected area presented clinical signs typical of bluetongue (BT) disease. A total of 5245 sheep in the affected region were considered to be susceptible, with 263 cases and thirty-six deaths. Bluetongue virus (BTV) serotype 1 was isolated and identified as the causative agent. Segments 2, 7 and 10 of this virus were sequenced and compared with other isolates from Morocco, Italy, Portugal and France showing that they all belong to a 'western' BTV group/topotype and collectively represent a western Mediterranean lineage of BTV-1.


Subject(s)
Bluetongue virus/genetics , Bluetongue/epidemiology , Algeria/epidemiology , Animals , Antibodies, Viral/blood , Bluetongue/virology , Capsid Proteins/genetics , Capsid Proteins/metabolism , Disease Outbreaks/veterinary , Gene Expression Regulation, Viral , Molecular Epidemiology , Phylogeny , Sheep
18.
Virus Genes ; 40(1): 67-75, 2010 Feb.
Article in English | MEDLINE | ID: mdl-19830536

ABSTRACT

Epizootic haemorrhagic disease virus is a 10-segmented, double-stranded RNA virus. When these ten segments of dsRNA are run on 1% agarose, eastern (Australia, Japan) and western (North America, Africa, Middle-East) strains of the virus can be separated phenotypically based on the migration of genome segments 7-9. In western strains, segments 7-9 are roughly the same size and co-migrate as a single RNA band. In eastern strains, segment 9 is smaller, so while segments 7 and 8 co-migrate, the segment 9 RNA runs faster than its western homologue. Translation experiments demonstrated that these two segment 9 homologues are both functional and produce proteins (VP6) of different sizes-something that has not been reported in any other orbivirus species to date. Sequence analysis suggests that eastern and western versions of segment 9 (VP6) have likely evolved as a response to adaptive selection in different geographical regions via gene duplication and subsequent mutation. These significant findings are considered unusual given the conserved nature of VP6 and its presumed role as the viral helicase. It is not currently known what the biological relevance of each homologue is to the virus.


Subject(s)
Capsid Proteins/genetics , Evolution, Molecular , Hemorrhagic Disease Virus, Epizootic/genetics , Amino Acid Sequence , Animals , Capsid Proteins/chemistry , Cell Line , Conserved Sequence , Cricetinae , Genome, Viral , Hemorrhagic Disease Virus, Epizootic/chemistry , Molecular Sequence Data , Phylogeny , Sequence Alignment
19.
Transbound Emerg Dis ; 56(9-10): 355-61, 2009 Dec.
Article in English | MEDLINE | ID: mdl-19909474

ABSTRACT

An EDTA-blood sample from a cow without clinical signs, which gave early birth to a newborn calf that died soon after delivery, was shown to be positive for bluetongue virus (BTV)-RNA using a group-specific real-time RT-PCR (RT-qPCR). In-house serotype-specific RT-qPCR assays for bluetongue virus serotype 1 (BTV-1), -6 and -8 all gave negative results. Subsequent assays were carried out using conventional (gel-based) RT-PCR primers for all 25 BTV serotypes and only two primer sets, both specific for BTV-11, gave bands of the expected size. The cDNAs generated were sequenced and comparisons of the genome segment 2 sequence with that of the modified 'live' vaccine strain of BTV-11 from South Africa showed 100% identity. A survey of all ruminants in a 1-km area around the first positive farm using a BTV-11 serotype-specific RT-qPCR revealed five other holdings with in total nine BTV-11 positive animals. A cross-sectional monitoring of dairy cattle in Belgium showed an overall prevalence of 3.8% on herd level and 0.2% on animal level. A BTV-11 has been introduced into the Belgian cattle herd during the 2008 vector season. The source of the infection and the way by which the virus was introduced are unknown.


Subject(s)
Bluetongue virus/genetics , Bluetongue/virology , Cattle Diseases/virology , Animals , Antibodies, Viral/blood , Belgium/epidemiology , Bluetongue/blood , Bluetongue/epidemiology , Bluetongue virus/classification , Cattle , Cattle Diseases/blood , Cattle Diseases/epidemiology , Cross-Sectional Studies , Dairying , Female , Population Surveillance , Pregnancy , Pregnancy Complications , RNA, Viral , Seasons , Sheep
20.
Virus Res ; 145(2): 211-9, 2009 Nov.
Article in English | MEDLINE | ID: mdl-19665508

ABSTRACT

Three unique non-structural (NS) proteins are produced by Epizootic haemorrhagic disease virus (EHDV) during infection of a host cell; NS1, NS2 and NS3. This study presents a complete genetic and phylogenetic analysis of these proteins (and the genes that code for them) to allow comparison of the selective pressures acting on each. Accession numbers, gene and protein sizes, ORF positions, G+C contents, terminal hexanucleotides, start and stop codons and phylogenetic relationships are all presented. Unlike the core, or outer-coat proteins, there are no characteristic genetic or phylogenetic traits common to all of the EHDV NS proteins; indicating that each is evolving under different selection pressures. These differences are discussed. Evidence of genetic recombination in genome segment 8 (coding for NS2) is also presented, together with evidence of gene duplication and mutation, suggesting the EHDV genome may have evolved using mechanisms such as these.


Subject(s)
Orbivirus/genetics , Phylogeny , Reoviridae Infections/veterinary , Viral Nonstructural Proteins/genetics , Animals , Cluster Analysis , Evolution, Molecular , Molecular Sequence Data , Orbivirus/isolation & purification , Reoviridae Infections/virology , Sequence Analysis, DNA , Sequence Homology, Amino Acid
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