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2.
Nat Genet ; 44(4): 445-9, S1, 2012 Feb 26.
Article in English | MEDLINE | ID: mdl-22366787

ABSTRACT

Nicolaides-Baraitser syndrome (NBS) is characterized by sparse hair, distinctive facial morphology, distal-limb anomalies and intellectual disability. We sequenced the exomes of ten individuals with NBS and identified heterozygous variants in SMARCA2 in eight of them. Extended molecular screening identified nonsynonymous SMARCA2 mutations in 36 of 44 individuals with NBS; these mutations were confirmed to be de novo when parental samples were available. SMARCA2 encodes the core catalytic unit of the SWI/SNF ATP-dependent chromatin remodeling complex that is involved in the regulation of gene transcription. The mutations cluster within sequences that encode ultra-conserved motifs in the catalytic ATPase region of the protein. These alterations likely do not impair SWI/SNF complex assembly but may be associated with disrupted ATPase activity. The identification of SMARCA2 mutations in humans provides insight into the function of the Snf2 helicase family.


Subject(s)
Chromosomal Proteins, Non-Histone/genetics , Foot Deformities, Congenital/genetics , Hypotrichosis/genetics , Intellectual Disability/genetics , Transcription Factors/genetics , Adolescent , Adult , Amino Acid Sequence , Base Sequence , Child , Child, Preschool , Chromatin Assembly and Disassembly , Chromosomal Proteins, Non-Histone/metabolism , Facies , Genes, Regulator , Humans , Infant , Male , Molecular Sequence Data , Mutation, Missense , Sequence Alignment , Sequence Analysis, DNA , Transcription Factors/chemistry , Transcription Factors/metabolism , Transcription, Genetic , Young Adult
3.
Eur J Hum Genet ; 17(10): 1354-8, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19352412

ABSTRACT

Neurodevelopmental disorders that disturb speech and language are highly heritable. Isolation of the underlying genetic risk factors has been hampered by complexity of the phenotype and potentially large number of contributing genes. One exception is the identification of rare heterozygous mutations of the FOXP2 gene in a monogenic syndrome characterised by impaired sequencing of articulatory gestures, disrupting speech (developmental verbal dyspraxia, DVD), as well as multiple deficits in expressive and receptive language. The protein encoded by FOXP2 belongs to a divergent subgroup of forkhead-box transcription factors, with a distinctive DNA-binding domain and motifs that mediate hetero- and homodimerisation. FOXP1, the most closely related member of this subgroup, can directly interact with FOXP2 and is co-expressed in neural structures relevant to speech and language disorders. Moreover, investigations of songbird orthologues indicate that combinatorial actions of the two proteins may play important roles in vocal learning, leading to the suggestion that human FOXP1 should be considered a strong candidate for involvement in DVD. Thus, in this study, we screened the entire coding region of FOXP1 (exons and flanking intronic sequence) for nucleotide changes in a panel of probands used earlier to detect novel mutations in FOXP2. A non-synonymous coding change was identified in a single proband, yielding a proline-to-alanine change (P215A). However, this was also found in a random control sample. Analyses of non-coding SNP changes did not find any correlation with affection status. We conclude that FOXP1 mutations are unlikely to represent a major cause of DVD.


Subject(s)
Apraxias/genetics , Forkhead Transcription Factors/genetics , Repressor Proteins/genetics , Amino Acid Sequence , Child , Developmental Disabilities/genetics , Dimerization , Heterozygote , Humans , Language , Molecular Sequence Data , Mutation , Risk Factors , Sequence Homology, Amino Acid , Speech
4.
Am J Hum Genet ; 76(6): 1074-80, 2005 Jun.
Article in English | MEDLINE | ID: mdl-15877281

ABSTRACT

FOXP2, the first gene to have been implicated in a developmental communication disorder, offers a unique entry point into neuromolecular mechanisms influencing human speech and language acquisition. In multiple members of the well-studied KE family, a heterozygous missense mutation in FOXP2 causes problems in sequencing muscle movements required for articulating speech (developmental verbal dyspraxia), accompanied by wider deficits in linguistic and grammatical processing. Chromosomal rearrangements involving this locus have also been identified. Analyses of FOXP2 coding sequence in typical forms of specific language impairment (SLI), autism, and dyslexia have not uncovered any etiological variants. However, no previous study has performed mutation screening of children with a primary diagnosis of verbal dyspraxia, the most overt feature of the disorder in affected members of the KE family. Here, we report investigations of the entire coding region of FOXP2, including alternatively spliced exons, in 49 probands affected with verbal dyspraxia. We detected variants that alter FOXP2 protein sequence in three probands. One such variant is a heterozygous nonsense mutation that yields a dramatically truncated protein product and cosegregates with speech and language difficulties in the proband, his affected sibling, and their mother. Our discovery of the first nonsense mutation in FOXP2 now opens the door for detailed investigations of neurodevelopment in people carrying different etiological variants of the gene. This endeavor will be crucial for gaining insight into the role of FOXP2 in human cognition.


Subject(s)
Language Disorders/etiology , Language Disorders/genetics , Speech Disorders/etiology , Speech Disorders/genetics , Transcription Factors/genetics , Alternative Splicing , Amino Acid Sequence , Base Sequence , Codon, Initiator , Codon, Nonsense , Codon, Terminator , DNA Mutational Analysis , Exons , Forkhead Transcription Factors , Genetic Variation , Heterozygote , Humans , Molecular Sequence Data , Mothers , Pedigree , Protein Isoforms/chemistry , Protein Isoforms/genetics , Protein Structure, Tertiary , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Sequence Homology, Nucleic Acid , Siblings , Transcription Factors/chemistry
5.
J Genet Couns ; 11(2): 121-46, 2002 Apr.
Article in English | MEDLINE | ID: mdl-12735292

ABSTRACT

The objective of this document is to provide health care professionals with recommendations for genetic counseling and testing of individuals with a suspected or confirmed diagnosis of Fabry disease, with a family history of Fabry disease, and those identified as female carriers of Fabry disease. These recommendations are the opinions of a multicenter working group of genetic counselors, medical geneticists, and other health professionals with expertise in Fabry disease counseling, as well as an individual with Fabry disease who is a founder of a Fabry disease patient advocacy group in the United States. The recommendations are U.S. Preventive Task Force Class III, and they are based on clinical experience, a review of pertinent English-language articles, and reports of expert committees. This document reviews the genetics of Fabry disease, the indications for genetic testing and interpretation of results, psychosocial considerations, and references for professional and patient resources. These recommendations should not be construed as dictating an exclusive course of management, nor does use of such recommendations guarantee a particular outcome. The professional judgment of a healthcare provider, familiar with the facts and circumstances of a specific case, will always supersede these recommendations.


Subject(s)
Fabry Disease/genetics , Genetic Counseling/standards , Adult , Fabry Disease/diagnosis , Female , Genetic Testing/standards , Heterozygote , Humans , Minors , Patient Advocacy , Prenatal Diagnosis
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