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1.
PLoS One ; 13(1): e0186889, 2018.
Article in English | MEDLINE | ID: mdl-29342152

ABSTRACT

Juvenile fish nurseries are an essential life stage requirement for the maintenance of many fish populations. With many inshore habitats globally in decline, optimising habitat management by increasing our understanding of the relationship between juvenile fish and nursery habitats may be a prudent approach. Previous research on post-settlement snapper (Chrysophrys auratus) has suggested that structure may provide a water flow refuge, allowing snapper to access high water flow sites that will also have a high flux of their pelagic prey. We investigated this hypothesis by describing how Artificial Seagrass Units (ASUs) modified water flow while also using a multi-camera set up to quantify snapper position in relation to this water flow environment. Horizontal water flow was reduced on the down-current side of ASUs, but only at the height of the seagrass canopy. While the highest abundance of snapper did occur down-current of the ASUs, many snapper also occupied other locations or were too high in the water column to receive any refuge from water flow. The proportion of snapper within the water column was potentially driven by strategy to access zooplankton prey, being higher on the up-current side of ASUs and on flood tides. It is possible that post-settlement snapper alternate position to provide opportunities for both feeding and flow refuging. An alternative explanation relates to an observed interaction between post-settlement snapper and a predator, which demonstrated that snapper can utilise habitat structure when threatened. The nature of this relationship, and its overall importance in determining the value of nursery habitats to post-settlement snapper remains an elusive next step.


Subject(s)
Ecosystem , Fishes/physiology , Animals
2.
Stat Methods Med Res ; 27(12): 3835-3838, 2018 12.
Article in English | MEDLINE | ID: mdl-28552010

ABSTRACT

I comment here on a recent paper in this journal, on the fitting of truncated normal distributions by the EM algorithm. I show that the fitting of such distributions by direct numerical maximization of likelihood (rather than EM) is straightforward, contrary to an assertion made by the authors of that paper.


Subject(s)
Algorithms , Motivation , Normal Distribution
4.
Stat Methods Med Res ; 23(3): 308-311, 2014 06.
Article in English | MEDLINE | ID: mdl-24837788
5.
Vet Radiol Ultrasound ; 52(2): 161-7, 2011.
Article in English | MEDLINE | ID: mdl-21388467

ABSTRACT

Implants containing metallic components have the potential to become heated or move within the patient while in the magnetic resonance (MR) environment. Despite containing a ferromagnetic core and having been in use for over 20 years, no information is available on the safety of veterinary radiofrequency identification devices during MR examinations. These devices are the most commonly encountered metallic implants in dogs and cats undergoing MR imaging. Three commercial veterinary microchips were evaluated for safety in the MR environment at 1 T. Parameters tested were translational force, torque, heating, artifact production, and function. Translation and torque were larger than that expected from normal activity under normal gravity. No significant heating was observed. Signal void artifacts may affect diagnosis if they are too close to the area of clinical importance. Microchip function was unaffected by routine clinical MR imaging. Capsule formation around devices is a major factor in counteracting translation and torque. Our findings support that is acceptable for patients to undergo MR imaging with this 1 T system following an interval of 3 months postimplantation to allow capsule growth. Because of the complex interactions involved, these observations may not be translatable to MR scanners of different field strength and/or manufacturer. Further safety testing of these and other radiofrequency identification devices is therefore recommended at different field strengths and equipment specifications.


Subject(s)
Equipment Safety , Magnetic Resonance Imaging/veterinary , Radio Frequency Identification Device , Animals , Artifacts , Heating , Magnetic Resonance Imaging/adverse effects , Metals/adverse effects , Torque
6.
Biometrics ; 64(3): 807-815, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18047533

ABSTRACT

We describe a family of models developed for time series of animal feeding behavior. The models incorporate both an unobserved state, which can be interpreted as the motivational state of the animal, and a mechanism for feedback to this state from the observed behavior. We discuss methods for evaluating and maximizing the likelihood of an observed series of behaviors, and thereby estimating parameters, and for inferring the most likely sequence of underlying states. We indicate several extensions of the models, including the incorporation of random effects. We apply these methods in an analysis of the feeding behavior of the caterpillar Helicoverpa armigera, and thereby demonstrate the potential of this family of models as a tool in the investigation of behavior.


Subject(s)
Behavior, Animal , Biometry/methods , Models, Psychological , Algorithms , Animals , Feedback, Psychological , Feeding Behavior , Likelihood Functions , Models, Statistical , Moths/physiology , Time Factors
7.
Nat Mater ; 5(4): 328-33, 2006 Apr.
Article in English | MEDLINE | ID: mdl-16547518

ABSTRACT

Organic semiconductors that can be fabricated by simple processing techniques and possess excellent electrical performance, are key requirements in the progress of organic electronics. Both high semiconductor charge-carrier mobility, optimized through understanding and control of the semiconductor microstructure, and stability of the semiconductor to ambient electrochemical oxidative processes are required. We report on new semiconducting liquid-crystalline thieno[3,2-b ]thiophene polymers, the enhancement in charge-carrier mobility achieved through highly organized morphology from processing in the mesophase, and the effects of exposure to both ambient and low-humidity air on the performance of transistor devices. Relatively large crystalline domain sizes on the length scale of lithographically accessible channel lengths ( approximately 200 nm) were exhibited in thin films, thus offering the potential for fabrication of single-crystal polymer transistors. Good transistor stability under static storage and operation in a low-humidity air environment was demonstrated, with charge-carrier field-effect mobilities of 0.2-0.6 cm(2) V(-1) s(-1) achieved under nitrogen.

8.
J Clin Anesth ; 16(7): 537-8, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15590259

ABSTRACT

Huntington disease presents many challenges for the anesthetist. Of primary importance is that these patients are at increased risk of pulmonary aspiration. The use of short-acting anesthetic drugs should, therefore, be advantageous in promoting the rapid return of protective airway reflexes. We report the first documented use, to date, of propofol and remifentanil total intravenous anesthesia in a patient with Huntington disease and demonstrate its efficacy and safety.


Subject(s)
Anesthesia, Intravenous , Anesthetics, Combined , Huntington Disease/complications , Piperidines , Propofol , Adult , Elective Surgical Procedures , Female , Humans , Remifentanil
9.
J Biol Chem ; 277(4): 2547-53, 2002 Jan 25.
Article in English | MEDLINE | ID: mdl-11706033

ABSTRACT

We have performed resonance Raman studies on ferrous NO- and CO-adducts of cytochrome P450(cam) and investigated the effects of diprotein complex formation with reduced putidaredoxin. We have found that the Fe-NO stretching mode of NO-P450(cam) can be resolved into two peaks at 551 and 561 cm(-1), and the binding of putidaredoxin increases the intensity of the high frequency component. Because the Fe-NO mode has been shown to be more sensitive to the nature of the heme proximal ligand than to the distal pocket environment, such a perturbation upon putidaredoxin binding is suggestive of changes in conformation or electronic structure that affect the proximal iron-cysteine bond. In accordance with this idea, the isotope shifts for the Fe-XO stretching and Fe-X-O bending modes (X = N or C) are insensitive to the presence or absence of putidaredoxin, indicating that the geometry of the Fe-X-O unit is not significantly altered by the complex formation. On the other hand, complex formation does induce a perturbation of the low frequency heme vibrational modes, suggesting that alterations of the heme electronic structure and/or geometry take place when putidaredoxin binds. We also find that cytochrome b(5) minimally affects the heme active site of the enzyme, although both putidaredoxin and cytochrome b(5) bind to the same or similar site on P450(cam). These observations suggest that there is a key specific interaction between P450(cam) and putidaredoxin, and that this interaction increases the population of a protein conformation that exhibits structural and/or electronic distortions of the heme group associated with the proximal side of the heme pocket and the S --> Fe electron donation. These electronic and structural changes are potentially correlated with H-bonding to the proximal cysteine.


Subject(s)
Camphor 5-Monooxygenase/chemistry , Camphor 5-Monooxygenase/metabolism , Ferredoxins/chemistry , Ferredoxins/metabolism , Organometallic Compounds/chemistry , Animals , Binding Sites , Cysteine/chemistry , Electrons , Escherichia coli/metabolism , Heme/chemistry , Heme/metabolism , Iron/chemistry , Iron/metabolism , Ligands , Liver/metabolism , Protein Binding , Protein Conformation , Rats , Spectrum Analysis, Raman
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