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1.
Science ; 363(6426): 516-521, 2019 02 01.
Article in English | MEDLINE | ID: mdl-30705189

ABSTRACT

To provide an observational basis for the Intergovernmental Panel on Climate Change projections of a slowing Atlantic meridional overturning circulation (MOC) in the 21st century, the Overturning in the Subpolar North Atlantic Program (OSNAP) observing system was launched in the summer of 2014. The first 21-month record reveals a highly variable overturning circulation responsible for the majority of the heat and freshwater transport across the OSNAP line. In a departure from the prevailing view that changes in deep water formation in the Labrador Sea dominate MOC variability, these results suggest that the conversion of warm, salty, shallow Atlantic waters into colder, fresher, deep waters that move southward in the Irminger and Iceland basins is largely responsible for overturning and its variability in the subpolar basin.

2.
J Cell Biochem ; 118(6): 1432-1441, 2017 06.
Article in English | MEDLINE | ID: mdl-27869314

ABSTRACT

The three-membered RUNX gene family includes RUNX1, a major mutational target in human leukemias, and displays hallmarks of both tumor suppressors and oncogenes. In mouse models, the Runx genes appear to act as conditional oncogenes, as ectopic expression is growth suppressive in normal cells but drives lymphoma development potently when combined with over-expressed Myc or loss of p53. Clues to underlying mechanisms emerged previously from murine fibroblasts where ectopic expression of any of the Runx genes promotes survival through direct and indirect regulation of key enzymes in sphingolipid metabolism associated with a shift in the "sphingolipid rheostat" from ceramide to sphingosine-1-phosphate (S1P). Testing of this relationship in lymphoma cells was therefore a high priority. We find that ectopic expression of Runx1 in lymphoma cells consistently perturbs the sphingolipid rheostat, whereas an essential physiological role for Runx1 is revealed by reduced S1P levels in normal spleen after partial Cre-mediated excision. Furthermore, we show that ectopic Runx1 expression confers increased resistance of lymphoma cells to glucocorticoid-mediated apoptosis, and elucidate the mechanism of cross-talk between glucocorticoid and sphingolipid metabolism through Sgpp1. Dexamethasone potently induces expression of Sgpp1 in T-lymphoma cells and drives cell death which is reduced by partial knockdown of Sgpp1 with shRNA or direct transcriptional repression of Sgpp1 by ectopic Runx1. Together these data show that Runx1 plays a role in regulating the sphingolipid rheostat in normal development and that perturbation of this cell fate regulator contributes to Runx-driven lymphomagenesis. J. Cell. Biochem. 118: 1432-1441, 2017. © 2016 Wiley Periodicals, Inc.


Subject(s)
Core Binding Factor Alpha 2 Subunit/metabolism , Drug Resistance, Neoplasm , Glucocorticoids/pharmacology , Lymphoma/genetics , Phosphoric Monoester Hydrolases/genetics , Sphingolipids/metabolism , Animals , Apoptosis , Cell Line, Tumor , Core Binding Factor Alpha 2 Subunit/genetics , Gene Expression Regulation, Neoplastic/drug effects , Lymphoma/metabolism , Mice , Neoplasms, Experimental/genetics , Neoplasms, Experimental/metabolism , Proprotein Convertases/genetics , Proto-Oncogene Proteins c-myc/genetics , Serine Endopeptidases/genetics , Transcription, Genetic/drug effects , Tumor Suppressor Protein p53/genetics
3.
J Biomech ; 43(4): 764-6, 2010 Mar 03.
Article in English | MEDLINE | ID: mdl-19909957

ABSTRACT

We adapt a biomechanical argument of Rashevsky, which places limits on the stress experienced by a torso supported by the legs, to deduce that body mass m of growing children should scale as the p th power of height h with 7/3 < p < 8/3. Further arguments based on stability and heat loss suggest that p should be close to 8/3. The arguments are extended to suggest that waist circumference w should scale as hq with q near the lower end of 2/3 < or = q < or = 1. Data from Hong Kong and British children are consistent with these hypotheses.


Subject(s)
Aging/physiology , Algorithms , Anthropometry/methods , Body Height/physiology , Body Weight/physiology , Models, Biological , Adult , Child , Child, Preschool , Computer Simulation , Female , Humans , Male , Reproducibility of Results , Sensitivity and Specificity , Young Adult
4.
Hum Genet ; 125(3): 319-26, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19184109

ABSTRACT

Pyruvate dehydrogenase phosphatase deficiency has previously only been confirmed at the molecular level in two brothers and two breeds of dog with exercise intolerance. A female patient, who died at 6 months, presented with lactic acidemia in the neonatal period with serum lactate levels ranging from 2.5 to 17 mM. Failure of dichloroacetate to activate the PDH complex in skin fibroblasts was evident, but not in early passages. A homozygous c.277G > T (p.E93X) nonsense mutation in the PDP1 gene was identified in genomic DNA and immunoblotting showed a complete absence of PDP1 protein in mitochondria. Native PDHC activity could be restored by the addition of either recombinant PDP1 or PDP2. This highlights the role of PDP2, the second phosphatase isoform, in PDP1-deficient patients for the first time. We conclude that the severity of the clinical course associated with PDP1 deficiency can be quite variable depending on the exact nature of the molecular defect.


Subject(s)
Codon, Nonsense , Genes, Lethal , Pyruvate Dehydrogenase (Lipoamide)-Phosphatase/deficiency , Pyruvate Dehydrogenase (Lipoamide)-Phosphatase/genetics , Acidosis, Lactic/blood , Acidosis, Lactic/enzymology , Acidosis, Lactic/genetics , Acidosis, Lactic/pathology , Animals , Base Sequence , Brain/pathology , Cells, Cultured , Consanguinity , DNA Primers/genetics , Dog Diseases/enzymology , Dog Diseases/genetics , Dogs , Female , Fibroblasts/enzymology , Homozygote , Humans , Infant , Isoenzymes/deficiency , Isoenzymes/metabolism , Lactic Acid/blood , Magnetic Resonance Imaging , Male , Phenotype
5.
Neuropediatrics ; 39(1): 20-3, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18504677

ABSTRACT

OBJECTIVE: The aim of this study is to report and emphasize unusual presentations of pyruvate dehydrogenase (PDH) deficiency (OMIM 312170). METHODS: PDH activity and PDHA1 gene were studied in two siblings presenting with intermittent ataxia in childhood. Similar presentations in reported PDH-deficient patients were searched for using the Medline database. RESULTS: Both patients had PDH deficiency caused by a new mutation (G585C) in the PDHA1 gene, which is predicted to replace a highly conserved glycine at codon 195 by alanine. Although this mutation lies within the thiamine pyrophosphate binding domain, there was no thiamine responsiveness IN VIVO. The patients presented recurrent episodes of acute isolated ataxia in infancy. Both had normal blood and CSF lactate levels. Although symptoms initially resolved between episodes during the first decade, both patients subsequently worsened and developed progressive and severe encephalopathy, leading to death in their twenties. The spectrum of intermittent presentations in PDH deficiency includes episodic ataxia, intermittent peripheral weakness, recurrent dystonia and extrapyramidal movement disorders. CONCLUSIONS: PDH deficiency should be considered in patients with unexplained intermittent and recurrent acute neurological symptoms. Long-term prognosis and outcome remain uncertain. PDH deficiency can occur even with normal CSF lactate concentration.


Subject(s)
Ataxia/diagnosis , Ataxia/etiology , Pyruvate Dehydrogenase Complex Deficiency Disease/complications , Pyruvate Dehydrogenase Complex Deficiency Disease/diagnosis , Ataxia/genetics , Basal Ganglia Diseases/etiology , Basal Ganglia Diseases/pathology , Binding Sites/genetics , Brain Diseases, Metabolic/etiology , Brain Diseases, Metabolic/pathology , Child , Child, Preschool , Diagnosis, Differential , Dystonia/etiology , Dystonia/pathology , Fatal Outcome , Humans , Infant , Lactic Acid/blood , Lactic Acid/cerebrospinal fluid , Male , Movement Disorders/etiology , Movement Disorders/pathology , Muscle Weakness/etiology , Muscle Weakness/pathology , Mutation , Pyruvate Dehydrogenase (Lipoamide)/genetics , Pyruvate Dehydrogenase Complex/genetics , Pyruvate Dehydrogenase Complex Deficiency Disease/genetics , Thiamine Pyrophosphate/metabolism
6.
Neuropediatrics ; 39(6): 328-34, 2008 Dec.
Article in English | MEDLINE | ID: mdl-19568996

ABSTRACT

Cytochrome c oxidase (COX) is the terminal enzyme of the respiratory chain, with subunits originating both from the mitochondrial and nuclear genome. An eleven-year-old female presented initially with a seizure followed two months later with tonic-clonic seizures, weakness and aphasia. MRI of the cerebral hemispheres showed multiple infarcts. Previous history suggested gross and fine motor control deficits with learning difficulties. A muscle biopsy showed a specific decrease of COX staining in all fibres and pleomorphic mitochondria. Respiratory chain studies confirmed an isolated complex IV defect in muscle, whilst fibroblasts showed an initial COX activity below normal which rapidly came up to the normal range on culture. Sequencing of mtDNA revealed an heteroplasmic m.7023G>A mutation in the COX1 gene, with levels of 96% in muscle, 70% in blood and 50% in the initial skin fibroblast culture dropping to 10% in later passages. The mutation was present in a critical region of the COX1 gene, the V374M change being close to the two histidine residues His376 and His378 co-ordinating with the heme a and a (3), and His367 which co-ordinates a magnesium ion. This case highlights that a MELAS-like syndrome can occur with isolated COX deficiency.


Subject(s)
Acidosis, Lactic/genetics , Cerebral Infarction/genetics , DNA Mutational Analysis , DNA, Mitochondrial/genetics , Electron Transport Complex IV/genetics , Epilepsy, Tonic-Clonic/genetics , Learning Disabilities/genetics , MELAS Syndrome/genetics , Psychomotor Disorders/genetics , Acidosis, Lactic/diagnosis , Alleles , Cerebral Infarction/diagnosis , Child , Epilepsy, Tonic-Clonic/diagnosis , Female , Histidine/genetics , Humans , Learning Disabilities/diagnosis , MELAS Syndrome/diagnosis , Magnesium/metabolism , Psychomotor Disorders/diagnosis , Sequence Analysis, DNA
7.
Am J Med Genet A ; 125A(3): 310-4, 2004 Mar 15.
Article in English | MEDLINE | ID: mdl-14994243

ABSTRACT

Rare cases of suspected spinal muscular atrophy (SMA) have been found to have cytochrome c oxidase (COX) deficiency. To date, four cases with SMA features have been reported in children with mutations in the synthesis of cytochrome oxidase 2 (SCO2) gene. We report a male neonate who was born hypotonic, with persistent lactic acidosis, spontaneous activity with EMG testing, development of respiratory distress in the first few hours of life, and died at 30 days of age with progressive cardiomyopathy. Testing for survival motor neurone (smn) and NAIP deletions were negative and a skeletal muscle biopsy showed neurogenic features with severe reductions of COX enzymatic and histochemical staining intensity. Post-mortem muscle, heart, and liver biopsies showed severe, moderate, and mild reductions in COX activity, respectively, with parallel findings in the protein content for the mitochondrial DNA (COII) and nuclear DNA (COIV) encoded subunits. DNA sequencing of exon 2 of the SCO2 gene revealed compound heterozygosity with mutations at G1541A (common mutation, E140K) and also at a novel site in the copper binding region (G1521A in the current case (converting a highly conserved cysteine to tyrosine [corrected] (C133Y) [corrected]); mother heterozygous for G1521A; and father heterozygous for G1541A). This case provides strong support that SCO2 mutations can result in neonatal hypotonia with an SMA 1 phenotype. SCO2 mutations should be screened in suspected SMA cases with normal smn mutation analysis and any one of; cardiomyopathy, lactic acidosis, or COX deficiency in muscle.


Subject(s)
Mutation/genetics , Proteins/genetics , Spinal Muscular Atrophies of Childhood/genetics , Biopsy , Cadaver , Carrier Proteins , DNA Mutational Analysis , DNA, Mitochondrial/genetics , Diagnosis, Differential , Fatal Outcome , Heart/physiology , Heterozygote , Humans , Infant, Newborn , Liver/enzymology , Male , Mitochondrial Proteins , Molecular Chaperones , Muscles/enzymology , Phenotype , Prostaglandin-Endoperoxide Synthases/metabolism , Spinal Muscular Atrophies of Childhood/pathology
8.
Anaesthesia ; 57(9): 921-5, 2002 Sep.
Article in English | MEDLINE | ID: mdl-12190760

ABSTRACT

A prospective, randomised, controlled clinical study was performed to compare the incidence and severity of postoperative peripheral venous thrombophlebitis associated with a single intravenous cannula used for both intra-operative and postoperative purposes, and two cannulae, one used intra-operatively and the other postoperatively. Sixty American Society of Anaesthesiologists (ASA) physical status I or II patients aged 18-65 years undergoing elective surgery were studied. The technique of cannula insertion was standardised. After surgery, the cannulation sites were examined daily by a blinded investigator for the presence and severity of thrombophlebitis using the Baxter Scale. The two groups were similar in terms of age, gender, weight, type and duration of surgical procedures, and drugs and fluids administered both intra-operatively and postoperatively. The proportion of patients that developed phlebitis was significantly less in the two cannulae group (26.1%) than in the single cannula group (63.3%) (p < 0.0001). The severity of phlebitis was greater in the single cannula group than in the two cannulae group. These results indicate that the use of a dedicated cannula for postoperative use decreases the incidence and severity of postoperative, peripheral, cannula-related phlebitis.


Subject(s)
Catheterization, Peripheral/instrumentation , Postoperative Care/instrumentation , Postoperative Complications/prevention & control , Thrombophlebitis/prevention & control , Adult , Aged , Female , Fluid Therapy , Humans , Infusions, Intravenous , Injections, Intravenous , Intraoperative Care/instrumentation , Male , Middle Aged , Prospective Studies , Severity of Illness Index
9.
Oncogene ; 20(3): 295-302, 2001 Jan 18.
Article in English | MEDLINE | ID: mdl-11313958

ABSTRACT

The Runx2 (Cbfa1, Pebp2alphaA, Aml3) gene was previously identified as a frequent target for transcriptional activation by proviral insertion in T-cell lymphomas of CD2-MYC transgenic mice. We have recently shown that over-expression of the full-length, most highly expressed Runx2 isoform in the thymus perturbs T-cell development, leads to development of spontaneous lymphomas at low frequency and is strongly synergistic with Myc. To gain further insight into the relationship of Runx2 to other lymphomagenic pathways, we tested the effect of combining the CD2-Runx2 transgene either with a Pim1 transgene (E(mu)-Pim1) or with the p53 null genotype, as each of these displays independent synergy with Myc. In both cases we observed synergistic tumour development. However, Runx2 appeared to have a dominant effect on the tumour phenotype in each case, with most tumours conforming to the CD3(+), CD8(+), CD4(+/-) phenotype seen in CD2-Runx2 mice. Neonatal infection of CD2-Runx2 mice with Moloney murine leukaemia virus (Moloney MLV) also led to a dramatic acceleration of tumour onset. Analysis of known Moloney MLV target genes in these lymphomas showed a high frequency of rearrangement at c-Myc or N-Myc (82%), and a significant number at Pim1 or Pim2 (23%), and at Pal1/Gfi1 (18%). These results indicate that Runx2 makes a distinct contribution to T-cell lymphoma development which does not coincide with any of the oncogene complementation groups previously identified by retroviral tagging.


Subject(s)
Caenorhabditis elegans Proteins , Homeodomain Proteins , Lymphoma, T-Cell/genetics , Neoplasm Proteins , Protein Serine-Threonine Kinases , Proto-Oncogene Proteins c-myc/genetics , Retroviridae/genetics , Saccharomyces cerevisiae Proteins , Trans-Activators , Transcription Factors/genetics , ATP-Binding Cassette Transporters , Animals , CD2 Antigens/metabolism , CD3 Complex/metabolism , CD4-Positive T-Lymphocytes , CD8-Positive T-Lymphocytes , Core Binding Factor Alpha 1 Subunit , Crosses, Genetic , DNA-Binding Proteins/genetics , Fungal Proteins , Gene Rearrangement, T-Lymphocyte , Genetic Complementation Test , Helminth Proteins , Lymphoma, T-Cell/immunology , Lymphoma, T-Cell/virology , Mice , Mice, Transgenic , Moloney murine leukemia virus/pathogenicity , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins/metabolism , Proto-Oncogene Proteins c-myc/metabolism , Proto-Oncogene Proteins c-pim-1 , Thymus Neoplasms/genetics , Transcription Factors/metabolism , Tumor Suppressor Protein p53/genetics
10.
Am J Hum Genet ; 68(2): 386-96, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11156534

ABSTRACT

We have studied cultured skin fibroblasts from three siblings and one unrelated individual, all of whom had fatal mitochondrial disease manifesting soon after birth. After incubation with 1 mM glucose, these four cell strains exhibited lactate/pyruvate ratios that were six times greater than those of controls. On further analysis, enzymatic activities of the pyruvate dehydrogenase complex, the 2-oxoglutarate dehydrogenase complex, NADH cytochrome c reductase, succinate dehydrogenase, and succinate cytochrome c reductase were severely deficient. In two of the siblings the enzymatic activity of cytochrome oxidase was mildly decreased (by approximately 50%). Metabolite analysis performed on urine samples taken from these patients revealed high levels of glycine, leucine, valine, and isoleucine, indicating abnormalities of both the glycine-cleavage system and branched-chain alpha-ketoacid dehydrogenase. In contrast, the activities of fibroblast pyruvate carboxylase, mitochondrial aconitase, and citrate synthase were normal. Immunoblot analysis of selected complex III subunits (core 1, cyt c(1), and iron-sulfur protein) and of the pyruvate dehydrogenase complex subunits revealed no visible changes in the levels of all examined proteins, decreasing the possibility that an import and/or assembly factor is involved. To elucidate the underlying molecular defect, analysis of microcell-mediated chromosome-fusion was performed between the present study's fibroblasts (recipients) and a panel of A9 mouse:human hybrids (donors) developed by Cuthbert et al. (1995). Complementation was observed between the recipient cells from both families and the mouse:human hybrid clone carrying human chromosome 2. These results indicate that the underlying defect in our patients is under the control of a nuclear gene, the locus of which is on chromosome 2. A 5-cM interval has been identified as potentially containing the critical region for the unknown gene. This interval maps to region 2p14-2p13.


Subject(s)
Chromosomes, Human, Pair 2/genetics , Mitochondria/pathology , Amino Acids/blood , Animals , Cells, Cultured , Chromosome Deletion , Fatal Outcome , Female , Fibroblasts/cytology , Fibroblasts/enzymology , Genetic Complementation Test , Humans , Infant , Male , Mitochondria/enzymology , Mutation , Phenotype , Radiation Hybrid Mapping , Syndrome
11.
J Appl Physiol (1985) ; 89(5): 1793-803, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11053328

ABSTRACT

The effects of sprint training on muscle metabolism and ion regulation during intense exercise remain controversial. We employed a rigorous methodological approach, contrasting these responses during exercise to exhaustion and during identical work before and after training. Seven untrained men undertook 7 wk of sprint training. Subjects cycled to exhaustion at 130% pretraining peak oxygen uptake before (PreExh) and after training (PostExh), as well as performing another posttraining test identical to PreExh (PostMatch). Biopsies were taken at rest and immediately postexercise. After training in PostMatch, muscle and plasma lactate (Lac(-)) and H(+) concentrations, anaerobic ATP production rate, glycogen and ATP degradation, IMP accumulation, and peak plasma K(+) and norepinephrine concentrations were reduced (P<0.05). In PostExh, time to exhaustion was 21% greater than PreExh (P<0.001); however, muscle Lac(-) accumulation was unchanged; muscle H(+) concentration, ATP degradation, IMP accumulation, and anaerobic ATP production rate were reduced; and plasma Lac(-), norepinephrine, and H(+) concentrations were higher (P<0.05). Sprint training resulted in reduced anaerobic ATP generation during intense exercise, suggesting that aerobic metabolism was enhanced, which may allow increased time to fatigue.


Subject(s)
Adaptation, Physiological/physiology , Exercise/physiology , Muscle, Skeletal/metabolism , Potassium/blood , Running/physiology , Acid-Base Equilibrium/physiology , Adenosine Triphosphate/biosynthesis , Adult , Anaerobic Threshold/physiology , Carbon Dioxide/blood , Epinephrine/blood , Glycogen/metabolism , Glycolysis/physiology , Heart Rate/physiology , Humans , Hydrogen-Ion Concentration , Lactic Acid/metabolism , Male , Norepinephrine/blood , Oxygen/blood , Oxygen Consumption/physiology , Physical Endurance/physiology , Protons , Pulmonary Gas Exchange/physiology
12.
J Virol ; 74(20): 9403-11, 2000 Oct.
Article in English | MEDLINE | ID: mdl-11000209

ABSTRACT

It has been shown that cats can be protected against infection with the prototypic Petaluma strain of feline immunodeficiency virus (FIV(PET)) using vaccines based on either inactivated virus particles or replication-defective proviral DNA. However, the utility of such vaccines in the field is uncertain, given the absence of consistent protection against antigenically distinct strains and the concern that the Petaluma strain may be an unrepresentative, attenuated isolate. Since reduction of viral pathogenicity and dissemination may be useful outcomes of vaccination, even in the absence of complete protection, we tested whether either of these vaccine strategies ameliorates the early course of infection following challenge with heterologous and more virulent isolates. We now report that an inactivated virus vaccine, which generates high levels of virus neutralizing antibodies, confers reduced virus loads following challenge with two heterologous isolates, FIV(AM6) and FIV(GL8). This vaccine also prevented the marked early decline in CD4/CD8 ratio seen in FIV(GL8)-infected cats. In contrast, DNA vaccines based on either FIV(PET) or FIV(GL8), which induce cell-mediated responses but no detectable antiviral antibodies, protected a fraction of cats against infection with FIV(PET) but had no measurable effect on virus load when the infecting virus was FIV(GL8). These results indicate that the more virulent FIV(GL8) is intrinsically more resistant to vaccinal immunity than the FIV(PET) strain and that a broad spectrum of responses which includes virus neutralizing antibodies is a desirable goal for lentivirus vaccine development.


Subject(s)
Immunodeficiency Virus, Feline/immunology , Vaccines, DNA/immunology , Viral Vaccines/immunology , Animals , Antibodies, Viral/blood , CD4-Positive T-Lymphocytes/immunology , Cats , Vaccination , Vaccines, Inactivated/immunology , Virulence
13.
Vaccine ; 18(11-12): 1118-32, 2000 Jan 06.
Article in English | MEDLINE | ID: mdl-10590334

ABSTRACT

Virus-specific effector cytotoxic T lymphocytes (CTL) were elicited in the peripheral blood of domestic cats following a single intramuscular inoculation of replication defective feline immunodeficiency virus proviral DNA (FIVDeltaRT). Higher levels of virus-specific cytolysis were observed in the blood when cats were co-inoculated with feline gamma-interferon (IFN) DNA. The responses declined by 12 weeks following the first DNA inoculation and were, with the exception of FIV Gag-specific responses in some cats, refractory to repeated DNA inoculations. Nevertheless, a significant proportion of the cats were protected from challenge with homologous virus. The effects of interval between inoculations, route of DNA delivery, and promoter used to regulate viral gene expression on the induction of virus-specific CTLs were evaluated. The highest levels of virus-specific lysis were recorded following intramuscular co-inoculation of FIVDeltaRT and gamma-IFN DNA, where FIV gene expression was under the control of a cytomegalovirus (CMV) promoter. However, the highest levels of protection were observed using the viral 5'LTR as the promoter. These results suggest that a single intramuscular inoculation of FIVDeltaRT DNA together with gamma-IFN DNA may be sufficient to induce virus-specific CTLs and protection.


Subject(s)
Immunodeficiency Virus, Feline/immunology , Interferon-gamma/genetics , T-Lymphocytes, Cytotoxic/immunology , Vaccines, DNA/immunology , Viral Vaccines/immunology , Animals , Cats , Cytomegalovirus/genetics , Gene Products, env/immunology , Gene Products, gag/immunology , Injections, Intramuscular , Promoter Regions, Genetic , Terminal Repeat Sequences
14.
Appl Opt ; 38(29): 6116-28, 1999 Oct 10.
Article in English | MEDLINE | ID: mdl-18324134

ABSTRACT

A high-speed hybrid optical-digital correlator system was designed, constructed, modeled, and demonstrated experimentally. This correlator is capable of operation at approximately 3000 correlations/s. The input scene is digitized at a resolution of 512 x 512 pixels and the phase information of the two-dimensional fast Fourier transform calculated and displayed in the correlator filter plane at normal video frame rates. High-fidelity reference template images are stored in a phase-conjugating optical memory placed at the nominal input plane of the correlator and reconstructed with a high-speed acousto-optic scanner; this allows for cross correlation of the entire reference data set with the input scene within one frame period. A high-speed CCD camera is used to capture the correlation-plane image, and rapid correlation-plane processing is achieved with a parallel processing architecture.

15.
J Virol ; 72(9): 7310-9, 1998 Sep.
Article in English | MEDLINE | ID: mdl-9696827

ABSTRACT

To test the potential of a multigene DNA vaccine against lentivirus infection, we generated a defective mutant provirus of feline immunodeficiency virus (FIV) with an in-frame deletion in pol (FIVDeltaRT). In a first experiment, FIVDeltaRT DNA was administered intramuscularly to 10 animals, half of which also received feline gamma interferon (IFN-gamma) DNA. The DNA was administered in four 100-microg doses at 0, 10, and 23 weeks. Immunization with FIVDeltaRT elicited cytotoxic T-cell (CTL) responses to FIV Gag and Env in the absence of a serological response. After challenge with homologous virus at week 26, all 10 of the control animals became seropositive and viremic but 4 of the 10 vaccinates remained seronegative and virus free. Furthermore, quantitative virus isolation and quantitative PCR analysis of viral DNA in peripheral blood mononuclear cells revealed significantly lower virus loads in the FIVDeltaRT vaccinates than in the controls. Immunization with FIVDeltaRT in conjunction with IFN-gamma gave the highest proportion of protected cats, with only two of five vaccinates showing evidence of infection following challenge. In a second experiment involving two groups (FIVDeltaRT plus IFN-gamma and IFN-gamma alone), the immunization schedule was reduced to 0, 4, and 8 weeks. Once again, CTL responses were seen prior to challenge in the absence of detectable antibodies. Two of five cats receiving the proviral DNA vaccine were protected against infection, with an overall reduction in virus load compared to the five infected controls. These findings demonstrate that DNA vaccination can elicit protection against lentivirus infection in the absence of a serological response and suggest the need to reconsider efficacy criteria for lentivirus vaccines.


Subject(s)
Antibodies, Viral/blood , Immunodeficiency Virus, Feline/immunology , Lentivirus Infections/prevention & control , Vaccines, DNA/immunology , Viral Vaccines/immunology , Amino Acid Sequence , Animals , Base Sequence , Cats , Cell Line , DNA, Viral/blood , Drug Administration Schedule , Humans , Immunodeficiency Virus, Feline/physiology , Molecular Sequence Data , Proviruses/genetics , T-Lymphocytes, Cytotoxic/immunology , Vaccination , Viral Load , Virus Replication
16.
Am J Hum Genet ; 62(6): 1312-9, 1998 Jun.
Article in English | MEDLINE | ID: mdl-9585612

ABSTRACT

We characterized the pyruvate carboxylase (PC) gene by PCR amplification, subcloning, and sequencing. The coding region has 19 exons and 18 introns spanning approximately 16 kb of genomic DNA. Screening both the cDNA and the gene of individuals with the simple A form of PC deficiency revealed an 1828G-->A missense mutation in 11 Ojibwa and 2 Cree patients and a 2229G-->T transversion mutation in 2 brothers of Micmac origin. Carrier frequency may be as high as 1/10 in some groupings. The two point mutations are located in a region of homology conserved among yeast, rat, and human PC, in the vicinity of the carboxylation domain of the enzyme. These data provide the first characterization of the human PC gene structure, the identification of common pathogenic mutations, and the demonstration of a founder effect in the Ojibwa and Cree patients.


Subject(s)
Indians, North American/genetics , Point Mutation , Pyruvate Carboxylase Deficiency Disease/genetics , Amino Acid Sequence , Animals , Brain/enzymology , Canada , Cell Line , DNA Mutational Analysis , Exons , Humans , Introns , Liver/enzymology , Molecular Sequence Data , Rats , Sequence Homology, Amino Acid
17.
Hum Mol Genet ; 7(3): 501-5, 1998 Mar.
Article in English | MEDLINE | ID: mdl-9467010

ABSTRACT

While the presence of a lipoyl-containing protein (protein X) separate from lipoyl transacetylase in the pyruvate dehydrogenase complex (PDC) has been known for some time, until recently only the cDNA for the yeast enzyme has been cloned. We have cloned, sequenced and characterized the cDNA encoding the human protein X and localized the protein X gene to chromosome 11p13. We also report here a new case of protein X deficiency identified immunologically, with decreased activity of PDC and without mutations in the E1alpha subunit or E1beta subunit. We report that the cDNA and gene of this patient for protein X has a homozygous 4 bp deletion, specifically in the putative mitochondrial targeting signal sequence which results in a premature stop codon. This is the first documented case of a molecular defect in pyruvate dehydrogenase protein X.


Subject(s)
Chromosomes, Human, Pair 11 , Homozygote , Peptides/genetics , Pyruvate Dehydrogenase Complex Deficiency Disease/genetics , Pyruvate Dehydrogenase Complex/genetics , Sequence Deletion , Amino Acid Sequence , Base Sequence , Child , Chromosome Mapping , Cloning, Molecular , Codon, Terminator , Humans , Macromolecular Substances , Male , Molecular Sequence Data , Peptides/chemical synthesis , Pyruvate Dehydrogenase Complex/biosynthesis , Pyruvate Dehydrogenase Complex/chemical synthesis , Recombinant Proteins/biosynthesis , Sequence Homology, Amino Acid
18.
J R Coll Surg Edinb ; 42(5): 295-302, 1997 Oct.
Article in English | MEDLINE | ID: mdl-9354060

ABSTRACT

The objective of the MATTUS intercollegiate exercise was to set up and audit a training initiative list scheme (TILS) by which funds are awarded to Trust hospitals for operative sessions used specifically for the training of staff in minimal access therapy (MAT). A prospective centralized audit of TILS involving nine Trust hospitals in Scotland over a 12-month period (1 March 1995-end of February 1996) was carried out. These hospitals had contracted for 510 4-h training sessions (389 for minimal access surgery, 121 for allied interventional techniques) by MATTUS accredited consultant tutors. The scheme covered training in technical competence for Minimal Access Surgery (MAS), interventional flexible endoscopy and interventional radiology within Scottish Hospitals. The main outcome measures used in the audit were trainee completion rates, conversion rates, morbidity and mortality, assessment of training received by trainees and assessment of aptitude by the trainers. The results were as follows. Of 510 sessions, 482 (95%) were completed within the deadline. Of these, 463 sessions were audited (367 for MAS, 69 for flexible endoscopy and 27 for interventional radiology). During these sessions, 817 operations/procedures were performed (781 training and 36 developmental). A total of 544 operations were performed during 339 MAS training sessions and 237 radiological/flexible endoscopy procedures in 96 MAT training sessions. The trainee was the principal operator in 643 (82%) procedures and completed the task in 581 (74%) cases. Four per cent of the MAS operations (22/544) required conversion. Post-operative complications occurred in 42 out of 817 patients (5%). Four patients, all with advanced malignancy, died within 30 days of the procedure. Trainees graded 355 sessions as excellent, 109 good, two as average and one as unsatisfactory. The tutors graded their trainees' aptitude to perform the operation as excellent in 34%, good in 53%, average in 11% and poor in < 1%. The training initiative list scheme which allows unhurried training in MAT by consultant tutors using operating sessions that are extra to the service lists is operationally and educationally viable. Furthermore, it can be implemented within a pre-determined budget. The audit of TILS has also demonstrated that the immediate clinical outcome of patients is not compromised by this type of training.


Subject(s)
Education, Medical, Graduate , General Surgery/education , Minimally Invasive Surgical Procedures , Educational Measurement , Humans , Prospective Studies , Scotland
19.
AIDS Res Hum Retroviruses ; 13(5): 405-12, 1997 Mar 20.
Article in English | MEDLINE | ID: mdl-9075482

ABSTRACT

Direct inoculation of genetic material in DNA form is a novel approach to vaccination that has proved efficacious for a number of viral agents. We are interested in the potential of this approach for the delivery of vaccines based on attenuated or replication-defective retroviruses. Toward this goal, we tested the effect of intramuscular inoculation of a plasmid containing the entire genome of feline immunodeficiency virus (FIV-Petaluma, F14 clone). DNA delivery was compared with intramuscular or intraperitoneal inoculation of virus reconstituted from the same molecular clone. The outcome was monitored by serological analysis and quantitative virus load determination over a 31-week period. DNA inoculation was found to be a reliable means of infection, although seroconversion and the rise in PBMC virus load were delayed relative to intramuscular or intraperitoneal inoculation of virus. At 31 weeks, similar levels of proviral DNA were detected in central lymphoid tissue of all infected animals. In conclusion, DNA inoculation of proviral DNA will be of use as a novel method of cell-free virus challenge and may have further potential for the delivery of lentiviral vaccines.


Subject(s)
Immunodeficiency Virus, Feline/immunology , Lentivirus Infections/virology , Vaccines, DNA/administration & dosage , Viral Vaccines/administration & dosage , Animals , Antibodies, Viral/blood , Cats , DNA, Viral/analysis , DNA, Viral/blood , Gene Products, gag , Immunodeficiency Virus, Feline/isolation & purification , Lentivirus Infections/immunology , Leukocytes, Mononuclear , Lymph Nodes/virology , Molecular Sequence Data , Proviruses , Viral Load
20.
Vaccine ; 14(12): 1095-102, 1996 Aug.
Article in English | MEDLINE | ID: mdl-8911003

ABSTRACT

The third variable region (V3) of the feline immunodeficiency virus (FIV) surface glycoprotein is predicted to have similar physical properties to that of HIV and has been shown to contain immunodominant and neutralizing epitopes. Immunological characteristics of this region were investigated further using a peptide corresponding to the middle of the putative FIV V3 loop. The peptide was recognized in ELISA by sera from the majority of naturally FIV-infected cats, and absorbed a significant fraction of the virus neutralizing activity from a pool of sera of cats naturally infected with FIV, confirming the immunogenic nature of this region. A sheep immunized with an octameric form of the peptide (multiple antigenic peptide; MAP) in Freund's complete adjuvant generated neutralizing antibody to a higher titre than infected cats. However, immunization of cats with the same MAP in an acceptable adjuvant formulation (Quil A) induced antibody and cytotoxic T-cell responses to the immunizing peptides but only minimal neutralizing activity. These responses did not significantly alter the kinetics of infection or the proviral load after challenge with a homologous strain of FIV, compared with naive controls. While the potential efficacy of peptide vaccines to lentiviruses remains to be determined, this study shows that the immune response evoked may be highly dependent on the delivery and adjuvant regime used.


Subject(s)
Immunodominant Epitopes/immunology , Peptides/immunology , Receptors, Virus/immunology , Amino Acid Sequence , Animals , Antibodies, Viral/biosynthesis , Cats , Immunodeficiency Virus, Feline/immunology , Immunodeficiency Virus, Feline/isolation & purification , Molecular Sequence Data , Neutralization Tests , Sequence Homology, Amino Acid , Sheep , T-Lymphocytes, Cytotoxic/immunology , Viral Load
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