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1.
Am Clin Lab ; 16(4): 6-7, 1997 May.
Article in English | MEDLINE | ID: mdl-10173024

ABSTRACT

A purposive syndromic classification diagnostic system, with known means to ends, has been developed that extracts bits of structural information from endogenous laboratory data. An edifice of structural information for organization, regulation, and decision-making was built for determining future pathophysiological events by asking the fewest questions to define the next event uniquely. The structural information is based on laboratory ordering patterns of physicians for patient populations they serve. Patient history and a physical examination may be included as hardware and software evolves for linking more aspects of the medical record.


Subject(s)
Algorithms , Hantavirus Infections/diagnosis , Clinical Laboratory Techniques/methods , Humans
3.
Am Clin Lab ; 15(10): 16-7, 1996.
Article in English | MEDLINE | ID: mdl-10172878

ABSTRACT

Syndromic classifications differ from other taxonomies because they build on an ideal theoretical information standard to amplify information. This ideal standard, a truth table with requisite variety, h, equal to or greater than the generated symbols or system it seeks to control, preserves all of the information about the disease state available in the database. Such a system, interestingly enough, theoretically has no beta errors (diagnostic misses) because all possible alternative disease hypotheses are created by the proper-sized truth table that controls the diagnostic system. Subsequent articles will examine the process in more detail.


Subject(s)
Clinical Laboratory Techniques/methods , Disease/classification , Humans , Mathematics
4.
Am J Clin Pathol ; 101(4 Suppl 1): S1-5, 1994 Apr.
Article in English | MEDLINE | ID: mdl-8154449

ABSTRACT

During late spring and early summer of 1993, national and international media called worldwide attention to a cluster of deaths in the southwestern United States. These patients succumbed to a rapidly progressive severe respiratory distress syndrome. After notification of state and national health agencies in mid-May, a major effort was launched to determine the cause of this often fatal respiratory distress syndrome, to advise the public on safety measures, and to determine the method of spread of this "mystery illness." Within weeks of recognition of the early cases, the Centers for Disease Control and Prevention announced the probable agent, a Hantavirus. This report details the response of pathologists, medical technologists, and other laboratory scientists to this new viral epidemic, with emphasis on activities that occurred within New Mexico.


Subject(s)
Bunyaviridae Infections/epidemiology , Bunyaviridae Infections/microbiology , Lung Diseases/epidemiology , Lung Diseases/microbiology , Orthohantavirus , Adolescent , Adult , Aged , Child , Disease Outbreaks , Female , Humans , Male , Middle Aged , Southwestern United States/epidemiology , Syndrome
5.
J Clin Microbiol ; 31(10): 2807-8, 1993 Oct.
Article in English | MEDLINE | ID: mdl-8253992

ABSTRACT

We have shown that stool samples from different patients can be pooled at a 1:2 dilution and reliably assayed for Giardia lamblia antigen by a commercial microtiter enzyme-linked immunosorbent assay (ELISA) system (LMD Laboratories, Inc., Carlsbad, Calif.). Laboratories can reduce reagent costs by pooling specimens submitted for the detection of Giardia antigen by ELISA.


Subject(s)
Antigens, Protozoan/analysis , Feces/parasitology , Giardia lamblia/immunology , Animals , Enzyme-Linked Immunosorbent Assay , Humans
7.
J Biol Chem ; 256(15): 7863-70, 1981 Aug 10.
Article in English | MEDLINE | ID: mdl-6894919

ABSTRACT

Changes in the Eu3+ luminescence decay constant observed for Eu3+ bound to prothrombin fragment 1 and the peptide containing residues 1-39 of prothrombin result solely from changes in the number of water molecules in the primary hydration sphere of the ion. Highly coordinated sites which bind Eu3+ in a different manner from simple Gla-containing peptides exist on both the fragment 1 and 1-39 molecules. Metal ions bound at some of these sites do not appear to undergo rapid exchange with metal ions in solution. The binding of other lanthanide ions and calcium ions in the presence of europium ions cause a change in the conformation of the macromolecules, resulting in even tighter coordination of fragment 1 or residues 1-39 to Eu3+. Hydrophilic groups other than the actual Eu3+ binding sites on fragment 1 help to maintain its water solubility when complexes to Eu3+ or Ca2+. Because the 1-39 peptide does not contain as many of these hydrophilic groups, the peptide precipitates upon binding to di- and trivalent cations. Self-association of the 1-39 molecules appears to occur at high peptide concentrations which result in a peptide concentration effect on Eu3+ binding not seen in fragment 1. pH titration yields results which suggest a role for Gla carboxyl groups in Eu3+ complexation to both fragments 1 and 1-39. Although the two molecules are not identical with regard to Eu3+ binding behavior, enough similarities exist that residues 1-39 appear to be a reasonable model of the fragment 1 molecule for the purposes of metal ion complexation studies.


Subject(s)
Europium , Peptide Fragments , Protein Precursors , Prothrombin , Amino Acid Sequence , Amino Acids/analysis , Animals , Binding Sites , Cattle , Hydrogen-Ion Concentration , Kinetics , Luminescent Measurements , Protein Binding
8.
Biochem J ; 193(2): 411-8, 1981 Feb 01.
Article in English | MEDLINE | ID: mdl-6171251

ABSTRACT

Rabbit anti-(bovine prothrombin fragment 1) antibodies were fractionated by using fragment-1 affinity chromatography in the absence of metal ions, and showed an absolute requirement for the presence of metal ions in their interactions with bovine fragment 1 or prothrombin. These antibodies were employed to evaluate both the rate constants for a protein conformation change and the equilibrium metal-ion binding to isolated bovine fragment 1 and intact prothrombin. The close similarity of the rates obtained for the conformation change in fragment 1 and those observed in prothrombin indicated that the same process is involved in both proteins and that the non-fragment-1 region of the prothrombin has essentially no effect on this process in the fragment-1 region. Equilibrium metal-ion-binding studies indicate that the details of the metal-ion-binding process in fragment 1 and prothrombin are essentially the same. We conclude that the metal-ion-binding behaviour of the fragment-1 domain of intact prothrombin is identical with that of isolated fragment 1.


Subject(s)
Calcium/metabolism , Epitopes/immunology , Magnesium/metabolism , Manganese/metabolism , Prothrombin/metabolism , Animals , Cattle , Isomerism , Kinetics , Protein Conformation , Prothrombin/immunology
9.
Int J Pept Protein Res ; 16(5): 440-9, 1980 Nov.
Article in English | MEDLINE | ID: mdl-7216619

ABSTRACT

The N-terminal decapeptide methyl ester, H-Ala-Asn-Lys-Gly-Phe-Leu-Gla-Gla-Val-Arg-OCH3 (16) of bovine prothrombin fragment 1 has been prepared by standard solution techniques, via a fragment coupling strategy. Hexapeptide Boc-Ala-Asn-Lys epsilon (Boc)-Gly-Phe-Leu-OBzl (9) was obtained by coupling Boc-Ala-Asn-Lys epsilon (Boc)Gly-OH (6) to the trifluoroacetate salt of H-Phe-Leu-OBzl (8). Hydrogenolysis of (9) followed by coupling to HCl. H-Gla gamma (OtBu)2-Gla gamma (OtBu)2-Val-Arg(HCl)-OCH3 (14) gave the fully protected decapeptide (15). Treatment of 15 with 90% trifluoroacetic acid followed by ion exchange chromatography of 15 yielded the methyl ester (16). The decapeptide 16 labeled with 125I using the Bolton-Hunter reagent, did not bind to antibodies specific for the calcium ion-induced conformation of bovine fragment 1.


Subject(s)
Prothrombin/chemical synthesis , Amino Acid Sequence , Animals , Antigen-Antibody Reactions , Calcium , Cattle , Peptide Fragments , Prothrombin/immunology , Prothrombin/pharmacology , Staphylococcus aureus/drug effects
12.
J Clin Invest ; 62(5): 1078-85, 1978 Nov.
Article in English | MEDLINE | ID: mdl-711853

ABSTRACT

Human Factor IX (Christmas factor) was isolated from the plasma of a patient with mild hemophilia B. The patient's plasma contained 5% Factor IX clotting activity but 100% Factor IX antigenic activity as determined by immunological assays, which included inhibitor neutralization and a radioimmunoassay for Factor IX. This abnormal Factor IX is called Factor IX Chapel Hill (Factor IXCH). Both normal Factor IX and Factor IXCH have tyrosine as the NH2-terminal amino acid. The two proteins have a similar molecular weight, a similar amino acid analysis, the same number of gamma-carboxyglutamic acid residues (10 gamma-carboxyglutamic acid residues), and a similar carbohydrate content. Both exist as a single-chain glycoprotein in plasma. The major difference between normal Factor IX and Factor IXCH is that the latter exhibits delayed activation to Factor IXa in the presence of Factor XIa and Ca2+. Thus, Factor IXCH differs from other previously described abnormal Factor IX molecules.


Subject(s)
Factor IX/isolation & purification , Adult , Amino Acid Sequence , Carbohydrates/analysis , Factor IX/genetics , Factor IX/metabolism , Humans , Kinetics , Male , Molecular Weight , Mutation , Protein Precursors/genetics
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