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1.
Anal Biochem ; 691: 115555, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38704117

ABSTRACT

Metal ions may act as enzyme cofactors and influence the kinetics of biochemical reactions that may also influence the biological production of therapeutic proteins and quality attributes such as glycosylation. Because sample preparation is a significant step in the reliable analysis of metals, we compared two sample preparation procedures for metal analysis of bioreactor culture media samples by ICP-MS: (i) samples were diluted in 2 % nitric acid (treatment with nitric acid, TNA); and (ii) samples were mixed with equal volume of 5 % nitric acid and closed vessel digestion was performed in a microwave (closed vessel digestion, CVD). In the comparison of extraction efficiencies between TNA and CVD procedures, CVD showed better extraction for Ca and Cu among bulk metals (∼30 %) and for Ni among the trace metals (∼65 %) for the bioreactor broth supernatant samples. For the cell pellet samples, the CVD procedure was found to be better for extraction of Fe (∼65 % more) among bulk metals, Zn (∼20 % more) among minor metals and Co (∼60 % more) and Ni (∼45 % more) among trace metals. Differences between the two procedures were less than 10 % and TNA was better for all other metals quantified from both supernatant samples and cell pellet samples. The current study helps bring more clarity to the methodology on comprehensive metal analysis to monitor and maintain trace metal content for biologics production.


Subject(s)
Bioreactors , Metals , Microwaves , Nitric Acid , Nitric Acid/chemistry , Metals/chemistry , Animals , Mass Spectrometry , Culture Media/chemistry , CHO Cells
2.
Appl Microbiol Biotechnol ; 108(1): 274, 2024 Mar 26.
Article in English | MEDLINE | ID: mdl-38530495

ABSTRACT

The pharmaceutical industry employs various strategies to improve cell productivity. These strategies include process intensification, culture media improvement, clonal selection, media supplementation and genetic engineering of cells. However, improved cell productivity has inherent risk of impacting product quality attributes (PQA). PQAs may affect the products' efficacy via stability, bioavailability, or in vivo bioactivity. Variations in manufacturing process may introduce heterogeneity in the products by altering the type and extent of N-glycosylation, which is a PQA of therapeutic proteins. We investigated the effect of different cell densities representing increasing process intensification in a perfusion cell culture on the production of an IgG1-κ monoclonal antibody from a CHO-K1 cell line. This antibody is glycosylated both on light chain and heavy chain. Our results showed that the contents of glycosylation of IgG1-κ mAb increased in G0F and fucosylated type glycans as a group, whereas sialylated type glycans decreased, for the mAb whole protein. Overall, significant differences were observed in amounts of G0F, G1F, G0, G2FS1, and G2FS2 type glycans across all process intensification levels. G2FS2 and G2 type N-glycans were predominantly quantifiable from light chain rather than heavy chain. It may be concluded that there is a potential impact to product quality attributes of therapeutic proteins during process intensification via perfusion cell culture that needs to be assessed. Since during perfusion cell culture the product is collected throughout the duration of the process, lot allocation needs careful attention to process parameters, as PQAs are affected by the critical process parameters (CPPs). KEY POINTS: • Molecular integrity may suffer with increasing process intensity. • Galactosylated and sialylated N-glycans may decrease. • Perfusion culture appears to maintain protein charge structure.


Subject(s)
Antibodies, Monoclonal , Immunoglobulin G , Cricetinae , Animals , CHO Cells , Cricetulus , Perfusion , Polysaccharides/chemistry
3.
Biotechnol J ; 16(12): e2100126, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34591352

ABSTRACT

BACKGROUND: Real time process data facilitates timely decisions, enables better process control, and can increase quality assurance. Biological drugs (mol. Wt. ≥ 40 kDa) are manufactured using mammalian cells such as Chinese hamster ovary (CHO) cells in bioreactors and have significant risks of contamination during processing. In such processes, in-line monitoring of biomass can provide real-time cell growth profiles and indications of bioreactor health. METHODS: An in-line conductivity/capacitance probe (Aber Instruments, Aberystwyth, UK) for monitoring CHO cell growth during fed batch cultures for producing an IgG1 monoclonal antibody was employed. Cell growth was measured in real-time using the capacitance probe (pF cm-1 ) while being compared with off-line measurements using a metabolic analyzer (Nova Biomedical, Waltham, MA, USA). Conductivity measurements (mS cm-1 ) detected variations in the solute concentrations in the bioreactor due to nutrient feed, bicarbonate buffer, and cellular metabolism by-products. RESULTS AND CONCLUSION: Abnormal increases in conductivity were found to consistently correspond to bacterial contamination, which was confirmed by orthogonal methods. The contaminated bioreactor runs exhibited sharp increases in conductivity rates hours before dissolved oxygen levels precipitously decreased due to bacterial growth. It is proposed that in-line measurement of conductivity could be employed for early detection of bacterial contaminations. The probe may be adopted in pharmaceutical aseptic aqueous liquid handling processes.


Subject(s)
Batch Cell Culture Techniques , Bioreactors , Animals , Biomass , CHO Cells , Cricetinae , Cricetulus
4.
Appl Microbiol Biotechnol ; 104(3): 1097-1108, 2020 Feb.
Article in English | MEDLINE | ID: mdl-31858193

ABSTRACT

The variability of trace metals in cell culture media is a potential manufacturing concern because it may significantly affect the production and quality of therapeutic proteins. Variability in trace metals in CHO cell culture has been shown to impact critical production metrics such as cell growth, viability, nutrient consumption, and production of recombinant proteins. To better understand the influence of excess supplementation, zinc and copper were initially supplemented with 50-µM concentrations to determine the impact on the production and quality of ß-glucuronidase, a lysosomal enzyme, in a parallel bioreactor system. Ethylenediaminetetraacetic acid (EDTA), a metal chelator, was included as another treatment to induce a depletion of trace metal bioavailability to examine deficiency. Samples were drawn daily to monitor cell growth and viability, nutrient levels, ß-glucuronidase activity, and trace zinc flux. Cell cycle analysis revealed the inhibition of sub-G0/G1 species in zinc supplemented cultures, maintaining higher viability compared to the control, EDTA-, and copper-supplemented cultures. Enzyme activity analysis in the harvests revealed higher specific activity of ß-glucuronidase in reactors supplemented with zinc. A confirmation run was conducted with supplementations of zinc at concentrations of 50, 100, and 150 µM. Further cell cycle analysis and caspase-3 analysis demonstrated the role of zinc as an apoptosis suppressor responsible for the enhanced harvest purity of ß-glucuronidase from zinc-supplemented bioreactors.


Subject(s)
Apoptosis/drug effects , Culture Media/chemistry , Glucuronidase/biosynthesis , Zinc/pharmacology , Animals , Batch Cell Culture Techniques , Bioreactors , CHO Cells , Cell Culture Techniques , Cell Proliferation/drug effects , Copper/pharmacology , Cricetulus
5.
Appl Microbiol Biotechnol ; 103(15): 6081-6095, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31175430

ABSTRACT

ß-Glucuronidase is a lysosomal enzyme and a molecular model of a class of therapeutics approved as enzyme replacement therapies for lysosomal storage diseases. Understanding the effect of bioreactor process variables on the production and quality of the biologics is critical for maintaining quality and efficacy of the biotherapeutics. Here, we have investigated the effect of three process variables, in a head-to-head comparison using a parallel bioreactor system (n = 8), namely 0.25 mM butyrate addition, a temperature shift (from 37 to 32 °C), and a pH shift (from 7.0 to 6.7) along with a control (pH 7, temperature 37 °C, and no additive) on the production and quality of human recombinant ß-glucuronidase (GUS) by a Chinese hamster ovary (CHO) cell line. The study was performed as two independent runs (2 bioreactors per treatment per run; n ≤ 4). Although statistically not significant, protein production slightly increased with either 0.25 mM butyrate addition (13%) or pH shift (7%), whereas temperature shift decreased production (12%, not significant). Further characterization of the purified GUS samples showed that purification selectively enriched the mannose-6-phosphate (M6P)-containing GUS protein. Noticeably, a variation observed for the critical quality attribute (CQA) of the enzyme, namely M6P content, decreased after purification, across treatment replicates and, more so, across different treatments. The dimer content in the purified samples was comparable (~25%), and no significant discrepancy was observed in terms of GUS charge variants by capillary electrophoresis analysis. MALDI-TOF/TOF analysis of released N-glycans from GUS showed a minor variation in glycoforms among the treatment groups. Temperature shift resulted in a slightly increased sialylated glycan content (21.6%) when compared to control (15.5%). These results suggest that bioreactor processes have a differential effect, and better control is required for achieving improved production of GUS enzyme in CHO cells without affecting drastically its CQAs. However, the purification method allowed for enrichment of GUS with similar CQA profiles, regardless of the upstream treatments, indicating for the first time that the effect of slight alterations in upstream process parameters on the CQA profile can be offset with an effective and robust purification method downstream to maintain drug substance uniformity.


Subject(s)
Bioreactors , Biotechnology/methods , Cell Culture Techniques/methods , Glucuronidase/isolation & purification , Recombinant Proteins/isolation & purification , Animals , Butyrates/metabolism , CHO Cells , Cricetulus , Culture Media/chemistry , Female , Glucuronidase/biosynthesis , Glucuronidase/genetics , Humans , Hydrogen-Ion Concentration , Recombinant Proteins/biosynthesis , Recombinant Proteins/genetics , Temperature
6.
J Pharm Biomed Anal ; 162: 91-100, 2019 Jan 05.
Article in English | MEDLINE | ID: mdl-30227357

ABSTRACT

Metal ions can be enzyme cofactors and can directly influence the kinetics of biochemical reactions that also influence the biological production and quality attributes of therapeutic proteins, such as glycan formation and distribution. However, the concentrations of metals in commercially available chemically defined media can range from 1 to 25,000 ppb. Because such concentration changes can impact cell growth, manufacturing yield and product quality the alteration/fluctuation in media composition should be well controlled to maintain product quality. Here, we describe a platform of analytical methods to determine the composition of several metals in different sample matrices using an advanced automated Inductively Coupled Plasma-Mass Spectrometry (ICP-MS). These methods, validated to ICH Q2R1 regulatory validation parameters, were successfully applied to- (a) screen cell culture media; (b) determine changes in the metal concentration during cell growth in spinner flasks, and, (c) determine effect on the glycosylation pattern and homogeneity of an IgG3:κ produced from a murine-hybridoma cell line in bench-top parallel bioreactors due to a spike in copper and iron concentration. Our results show that maintenance of metal content in the cell culture media is critical for product consistency of the IgG3:κ produced.


Subject(s)
Antibodies, Monoclonal/biosynthesis , Copper/metabolism , Culture Media/metabolism , Glucuronidase/biosynthesis , Immunoglobulin G/biosynthesis , Immunoglobulin kappa-Chains/biosynthesis , Iron/metabolism , Mass Spectrometry/methods , Animals , Antibodies, Monoclonal/genetics , Bioreactors , CHO Cells , Cell Proliferation , Cricetulus , Glucuronidase/genetics , Glycosylation , Hybridomas , Immunoglobulin G/genetics , Immunoglobulin kappa-Chains/genetics , Mass Spectrometry/standards , Mice , Quality Control , Reproducibility of Results , Time Factors , Transfection
7.
Biotechniques ; 63(3): 117-123, 2017 09 01.
Article in English | MEDLINE | ID: mdl-28911315

ABSTRACT

Phosphorylation is an important post-translational modification (PTM) of proteins and a critical quality attribute for protein therapeutics, especially if it is required for protein function or sub-cellular targeting. Most current methods to quantify phosphorylation are time-consuming, indirect, or require specific instrumentation and technical skills. Here, we report the adaptation of a phosphate-specific binding dye and common laboratory instruments for quantification of relative amounts of phosphorylated glycans as well as phosphorylation of amino acid residues on the backbones of proteins. Our results show that quantification of phosphorylation using the new method agrees with published data on the number of phosphorylated glycosylation sites for two lysosomal enzymes: ß-glucuronidase (GUS) and cathepsin D.


Subject(s)
Amino Acids/chemistry , Electrophoresis, Polyacrylamide Gel/methods , Polysaccharides/chemistry , Protein Processing, Post-Translational , Animals , CHO Cells , Cathepsin D/chemistry , Cricetulus , Glucuronidase/chemistry , Glycosylation , Humans , Image Processing, Computer-Assisted , Phosphorylation , Pyridines/chemistry
8.
Protein Expr Purif ; 140: 28-35, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28734840

ABSTRACT

Human ß-glucuronidase (GUS; EC 3.2.1.31) is a lysosomal enzyme that catalyzes the hydrolysis of ß-d-glucuronic acid residues from the non-reducing termini of glycosaminoglycans. Impairment in GUS function leads to the metabolic disorder mucopolysaccharidosis type VII, also known as Sly syndrome. We produced GUS from a CHO cell line grown in suspension in a 15 L perfused bioreactor and developed a three step purification procedure that yields ∼99% pure enzyme with a recovery of more than 40%. The method can be completed in two days and has the potential to be integrated into a continuous manufacturing scheme.


Subject(s)
Glucuronidase/biosynthesis , Glucuronidase/isolation & purification , Lysosomal Storage Diseases/enzymology , Animals , CHO Cells/enzymology , Cricetulus , Glucuronidase/chemistry , Humans , Lysosomal Storage Diseases/pathology
9.
Biotechnol Appl Biochem ; 61(2): 184-92, 2014.
Article in English | MEDLINE | ID: mdl-24033810

ABSTRACT

Bioreactor process changes can have a profound effect on the yield and quality of biotechnology products. Mannose-6-phosphate (M6P) glycan content and the enzymatic catalytic kinetic parameters are critical quality attributes (CQAs) of many therapeutic enzymes used to treat lysosomal storage diseases (LSDs). Here, we have evaluated the effect of adding butyrate to bioreactor production cultures of human recombinant ß-glucuronidase produced from CHO-K1 cells, with an emphasis on CQAs. The ß-glucuronidase produced in parallel bioreactors was quantified by capillary electrophoresis, the catalytic kinetic parameters were measured using steady-state analysis, and mannose-6-phosphorylation status was assessed using an M6P-specific single-chain antibody fragment. Using this approach, we found that butyrate treatment increased ß-glucuronidase production up to approximately threefold without significantly affecting the catalytic properties of the enzyme. However, M6P content in ß-glucuronidase was inversely correlated with the increased enzyme production induced by butyrate treatment. This assessment demonstrated that although butyrate dramatically increased ß-glucuronidase production in bioreactors, it adversely impacted the mannose-6-phosphorylation of this LSD therapeutic enzyme. This strategy may have utility in evaluating manufacturing process changes to improve therapeutic enzyme yields and CQAs.


Subject(s)
Bioreactors , Butyrates/pharmacology , Glucuronidase/biosynthesis , Lysosomal Storage Diseases/enzymology , Animals , Butyrates/chemistry , CHO Cells , Cricetinae , Cricetulus , Glucuronidase/therapeutic use , Humans , Lysosomal Storage Diseases/drug therapy , Lysosomal Storage Diseases/pathology , Mannosephosphates/chemistry , Mannosephosphates/pharmacology , Phosphorylation , Polysaccharides/chemistry
10.
J Comp Neurol ; 518(15): 2952-77, 2010 Aug 01.
Article in English | MEDLINE | ID: mdl-20533355

ABSTRACT

Acetyl coenzyme A synthetase-1 (AceCS1) catalyzes the synthesis of acetyl coenzyme A from acetate and coenzyme A and is thought to play diverse roles ranging from fatty acid synthesis to gene regulation. By using an affinity-purified antibody generated against an 18-mer peptide sequence of AceCS1 and a polyclonal antibody directed against recombinant AceCS1 protein, we examined the expression of AceCS1 in the rat brain. AceCS1 immunoreactivity in the adult rat brain was present predominantly in cell nuclei, with only light to moderate cytoplasmic staining in some neurons, axons, and oligodendrocytes. Some nonneuronal cell nuclei were very strongly immunoreactive, including those of some oligodendrocytes, whereas neuronal nuclei ranged from unstained to moderately stained. Both antibodies stained some neuronal cell bodies and axons, especially in the hindbrain. AceCS1 immunoreactivity was stronger and more widespread in the brains of 18-day-old rats than in adults, with increased expression in oligodendrocytes and neurons, including cortical pyramidal cells. Expression of AceCS1 was substantially up-regulated in neurons throughout the brain after controlled cortical impact injury. The strong AceCS1 expression observed in the nuclei of CNS cells during brain development and after injury is consistent with a role in nuclear histone acetylation and therefore the regulation of chromatin structure and gene expression. The cytoplasmic staining observed in some oligodendrocytes, especially during postnatal brain development, suggests an additional role in CNS lipid synthesis and myelination. Neuronal and axonal localization implicates AceCS1 in cytoplasmic acetylation reactions in some neurons.


Subject(s)
Brain/enzymology , Cell Nucleus/enzymology , Coenzyme A Ligases/biosynthesis , Cytoplasm/enzymology , Animals , Blotting, Western , Brain/anatomy & histology , Brain Injuries/enzymology , Cerebral Cortex/injuries , Chromatography, Affinity , Electrophoresis, Polyacrylamide Gel , Female , Glial Fibrillary Acidic Protein/metabolism , Immunoenzyme Techniques , Immunohistochemistry , Immunoprecipitation , Male , Molecular Sequence Data , Nerve Fibers/enzymology , Neural Pathways/cytology , Neural Pathways/enzymology , Rats , Rats, Sprague-Dawley , Rats, Wistar
11.
J Inherit Metab Dis ; 33(3): 195-210, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20464498

ABSTRACT

Genetic mutations that severely diminish the activity of aspartoacylase (ASPA) result in the fatal brain dysmyelinating disorder, Canavan disease. There is no effective treatment. ASPA produces free acetate from the concentrated brain metabolite, N-acetylaspartate (NAA). Because acetyl coenzyme A is a key building block for lipid synthesis, we postulated that the inability to catabolize NAA leads to a brain acetate deficiency during a critical period of CNS development, impairing myelination and possibly other aspects of brain development. We tested the hypothesis that acetate supplementation during postnatal myelination would ameliorate the severe phenotype associated with ASPA deficiency using the tremor rat model of Canavan disease. Glyceryltriacetate (GTA) was administered orally to tremor rats starting 7 days after birth, and was continued in food and water after weaning. Motor function, myelin lipids, and brain vacuolation were analyzed in GTA-treated and untreated tremor rats. Significant improvements were observed in motor performance and myelin galactocerebroside content in tremor rats treated with GTA. Further, brain vacuolation was modestly reduced, and these reductions were positively correlated with improved motor performance. We also examined the expression of the acetyl coenzyme A synthesizing enzyme acetyl coenzyme A synthase 1 and found upregulation of expression in tremor rats, with a return to near normal expression levels in GTA-treated tremor rats. These results confirm the critical role played by NAA-derived acetate in brain myelination and development, and demonstrate the potential usefulness of acetate therapy for the treatment of Canavan disease.


Subject(s)
Acetates/therapeutic use , Aspartic Acid/analogs & derivatives , Canavan Disease/therapy , Mutation , Animals , Aspartic Acid/metabolism , Aspartic Acid/therapeutic use , Brain/metabolism , Disease Models, Animal , Female , Heterozygote , Lipids/chemistry , Male , Myelin Sheath/chemistry , Phenotype , Rats , Treatment Outcome
12.
Brain Res ; 1335: 1-13, 2010 Jun 04.
Article in English | MEDLINE | ID: mdl-20385109

ABSTRACT

N-acetylaspartate (NAA) is a concentrated, neuron-specific brain metabolite routinely used as a magnetic resonance spectroscopy marker for brain injury and disease. Despite decades of research, the functional roles of NAA remain unclear. Biochemical investigations over several decades have associated NAA with myelin lipid synthesis and energy metabolism. However, studies have been hampered by an inability to identify the gene for the NAA biosynthetic enzyme aspartate N-acetyltransferase (Asp-NAT). A very recent report has identified Nat8l as the gene encoding Asp-NAT and confirmed that the only child diagnosed with a lack of NAA on brain magnetic resonance spectrograms has a 19-bp deletion in this gene. Based on in vitro Nat8l expression studies the researchers concluded that many previous biochemical investigations have been technically flawed and that NAA may not be associated with brain energy or lipid metabolism. In studies done concurrently in our laboratory we have demonstrated via cloning, expression, specificity for acetylation of aspartate, responsiveness to methamphetamine treatment, molecular modeling and comparative immunolocalization that NAT8L is the NAA biosynthetic enzyme Asp-NAT. We conclude that NAA is a major storage and transport form of acetyl coenzyme A specific to the nervous system, thus linking it to both lipid synthesis and energy metabolism.


Subject(s)
Acetyl Coenzyme A/metabolism , Acetyltransferases/biosynthesis , Aspartic Acid/analogs & derivatives , Methamphetamine/pharmacology , Neurons/enzymology , Acetylation , Acetyltransferases/genetics , Acetyltransferases/metabolism , Animals , Aspartic Acid/biosynthesis , Cell Line , Cell Line, Tumor , Gene Expression Regulation, Enzymologic/drug effects , Humans , Mice , Nerve Tissue Proteins/biosynthesis , Nerve Tissue Proteins/genetics , Nerve Tissue Proteins/metabolism , Pyramidal Cells/enzymology , Rats , Rats, Sprague-Dawley , Substrate Specificity/genetics
13.
J Neurochem ; 106(4): 1669-80, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18631215

ABSTRACT

N-Acetylaspartate (NAA) and N-acetylaspartylglutamate (NAAG) are related neuronal metabolites associated with the diagnosis and treatment of schizophrenia. NAA is a valuable marker of neuronal viability in magnetic resonance spectroscopy, a technique which has consistently shown NAA levels to be modestly decreased in the brains of schizophrenia patients. However, there are conflicting reports on the changes in brain NAA levels after treatment with antipsychotic drugs, which exert their therapeutic effects in part by blocking dopamine D(2) receptors. NAAG is reported to be an agonist of the metabotropic glutamate 2/3 receptor, which is linked to neurotransmitter release modulation, including glutamate release. Alterations in NAAG metabolism have been implicated in the development of schizophrenia possibly via dysregulation of glutamate neurotransmission. In the present study we have used high performance liquid chromatography to determine the effects of the antipsychotic drugs haloperidol and clozapine on NAA and NAAG levels in SH-SY5Y human neuroblastoma cells, a model system used to test the responses of dopaminergic neurons in vitro. The results indicate that the antipsychotic drugs haloperidol and clozapine increase both NAA and NAAG levels in SH-SY5Y cells in a dose and time dependant manner, providing evidence that NAA and NAAG metabolism in neurons is responsive to antipsychotic drug treatment.


Subject(s)
Antipsychotic Agents/pharmacology , Aspartic Acid/analogs & derivatives , Dipeptides/metabolism , Neuroblastoma/metabolism , Aspartic Acid/analysis , Aspartic Acid/metabolism , Cell Line, Tumor , Clozapine/pharmacology , Dipeptides/analysis , Dose-Response Relationship, Drug , Haloperidol/pharmacology , Humans , Neurons/drug effects , Neurons/metabolism
14.
Brain Res ; 1227: 34-41, 2008 Aug 28.
Article in English | MEDLINE | ID: mdl-18621030

ABSTRACT

Several reports during the last three decades have indicated that biosynthesis of N-acetylaspartate (NAA) occurs primarily in the mitochondria. But a recent report by Lu et al. in this journal [2004; 122: 71-78] and subsequent two reports that cited those data suggested a predominant microsomal localization of the NAA biosynthetic enzyme, which is surprising in view of what is known about the biological functions of NAA. Therefore we reinvestigated this issue in rat brain homogenates using a similar fractionation procedure used by Lu et al. but without the loss of enzyme activity that they have encountered. We found that about 70% of the total Asp-NAT activity in the crude supernatant was present in the mitochondrial fraction which is about 5 times more than that in the microsomes. We found similar results in the case of the enzyme from bovine brain. In subsequent studies, we also have found that Asp-NAT activity in the bovine brain is very similar to that in the rat brain in substrate specificity and chromatographic characteristics including the high molecular weight pattern (approx. 670 kD) on size-exclusion HPLC.


Subject(s)
Amino-Acid N-Acetyltransferase/metabolism , Aspartic Acid/analogs & derivatives , Brain/metabolism , Microsomes/metabolism , Mitochondria/metabolism , Animals , Aspartic Acid/biosynthesis , Brain/enzymology , Brain Chemistry , Carbon Radioisotopes/metabolism , Cattle , Cell Fractionation/methods , Chromatography, High Pressure Liquid/methods , Immunoradiometric Assay/methods , Male , Microsomes/enzymology , Mitochondria/enzymology , Rats , Rats, Sprague-Dawley , Subcellular Fractions/enzymology , Subcellular Fractions/metabolism
15.
Brain Res ; 1148: 1-14, 2007 May 07.
Article in English | MEDLINE | ID: mdl-17391648

ABSTRACT

Mutations that result in near undetectable activity of aspartoacylase, which catalyzes the deacetylation of N-acetyl-l-aspartate, correlate with Canavan Disease, a neurodegenerative disorder usually fatal during childhood. The underlying biochemical mechanisms of how these mutations ablate activity are poorly understood. Therefore, we developed and tested a three-dimensional homology model of aspartoacylase based on zinc dependent carboxypeptidase A. Mutations of the putative zinc-binding residues (H21G, E24D/G, and H116G), the general proton donor (E178A), and mutants designed to switch the order of the zinc-binding residues (H21E/E24H and E24H/H116E) yielded wild-type aspartoacylase protein levels and undetectable ASPA activity. Mutations that affect substrate carboxyl binding (R71N) and transition state stabilization (R63N) also yielded wild-type aspartoacylase protein levels and undetectable aspartoacylase activity. Alanine substitutions of Cys124 and Cys152, residues indicated by homology modeling to be in close proximity and in the proper orientation for disulfide bonding, yielded reduced ASPA protein and activity levels. Finally, expression of several previously tested (E24G, D68A, C152W, E214X, D249V, E285A, and A305E) and untested (H21P, A57T, I143T, P183H, M195R, K213E/G274R, G274R, and F295S) Canavan Disease mutations resulted in undetectable enzyme activity, and only E285A and P183H showed wild-type aspartoacylase protein levels. These results show that aspartoacylase is a member of the caboxypeptidase A family and offer novel explanations for most loss-of-function aspartoacylase mutations associated with Canavan Disease.


Subject(s)
Amidohydrolases/chemistry , Amidohydrolases/genetics , Brain Chemistry/genetics , Canavan Disease/enzymology , Canavan Disease/genetics , Mutation/genetics , Amino Acid Sequence/genetics , Amino Acid Substitution/genetics , Binding Sites/genetics , Carboxypeptidases A/chemistry , Carboxypeptidases A/genetics , DNA Mutational Analysis/methods , Enzyme Activation/genetics , Gene Expression Regulation, Enzymologic/genetics , Genetic Predisposition to Disease/genetics , Humans , Models, Molecular , Phylogeny , Protein Structure, Tertiary/genetics , Sequence Homology, Amino Acid
16.
Prog Neurobiol ; 81(2): 89-131, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17275978

ABSTRACT

The brain is unique among organs in many respects, including its mechanisms of lipid synthesis and energy production. The nervous system-specific metabolite N-acetylaspartate (NAA), which is synthesized from aspartate and acetyl-coenzyme A in neurons, appears to be a key link in these distinct biochemical features of CNS metabolism. During early postnatal central nervous system (CNS) development, the expression of lipogenic enzymes in oligodendrocytes, including the NAA-degrading enzyme aspartoacylase (ASPA), is increased along with increased NAA production in neurons. NAA is transported from neurons to the cytoplasm of oligodendrocytes, where ASPA cleaves the acetate moiety for use in fatty acid and steroid synthesis. The fatty acids and steroids produced then go on to be used as building blocks for myelin lipid synthesis. Mutations in the gene for ASPA result in the fatal leukodystrophy Canavan disease, for which there is currently no effective treatment. Once postnatal myelination is completed, NAA may continue to be involved in myelin lipid turnover in adults, but it also appears to adopt other roles, including a bioenergetic role in neuronal mitochondria. NAA and ATP metabolism appear to be linked indirectly, whereby acetylation of aspartate may facilitate its removal from neuronal mitochondria, thus favoring conversion of glutamate to alpha ketoglutarate which can enter the tricarboxylic acid cycle for energy production. In its role as a mechanism for enhancing mitochondrial energy production from glutamate, NAA is in a key position to act as a magnetic resonance spectroscopy marker for neuronal health, viability and number. Evidence suggests that NAA is a direct precursor for the enzymatic synthesis of the neuron specific dipeptide N-acetylaspartylglutamate, the most concentrated neuropeptide in the human brain. Other proposed roles for NAA include neuronal osmoregulation and axon-glial signaling. We propose that NAA may also be involved in brain nitrogen balance. Further research will be required to more fully understand the biochemical functions served by NAA in CNS development and activity, and additional functions are likely to be discovered.


Subject(s)
Aspartic Acid/analogs & derivatives , Central Nervous System/metabolism , Lipid Metabolism , Animals , Aspartic Acid/analysis , Aspartic Acid/genetics , Aspartic Acid/metabolism , Canavan Disease/etiology , Canavan Disease/genetics , Canavan Disease/metabolism , Central Nervous System/pathology , Energy Metabolism , Humans , Metabolic Networks and Pathways
17.
J Neurochem ; 98(6): 2034-42, 2006 Sep.
Article in English | MEDLINE | ID: mdl-16945114

ABSTRACT

The neuronal dipeptide N-acetylaspartylglutamate (NAAG) is thought to be synthesized enzymatically from N-acetylaspartate (NAA) and glutamate. We used radiolabeled precursors to examine NAA and NAAG biosynthesis in SH-SY5Y human neuroblastoma cells stimulated with activators of protein kinase A (dbcAMP; N6,2'-O-dibutyryl cAMP) and protein kinase C (PMA; phorbol-12-myristate-13-acetate). Differentiation over the course of several days with dbcAMP resulted in increased endogenous NAA levels and NAAG synthesis from l-[(3)H]glutamine, whereas PMA-induced differentiation reduced both. Exogenously applied NAA caused dose dependent increases in intracellular NAA levels, and NAAG biosynthesis from l-[(3)H]glutamine, suggesting precursor-product and mass-action relationships between NAA and NAAG. Incorporation of l-[(3)H]aspartate into NAA and NAAG occurred sequentially, appearing in NAA by 1 h, but not in NAAG until between 6 and 24 h. Synthesis of NAAG from l-[(3)H]aspartate was increased by dbcAMP and decreased by PMA at 24 h. The effects of PMA on l-[(3)H]aspartate incorporation into NAA were temporally biphasic. Using short incubation times (1 and 6 h), PMA increased l-[(3)H]aspartate incorporation into NAA, but with longer incubation (24 h), incorporation was significantly reduced. These results suggest that, while the neuronal production of NAA and NAAG are biochemically related, significant differences exist in the regulatory mechanisms controlling their biosynthesis.


Subject(s)
Aspartic Acid/analogs & derivatives , Dipeptides/biosynthesis , Neuroblastoma/metabolism , Protein Kinases/metabolism , Aspartic Acid/administration & dosage , Aspartic Acid/biosynthesis , Aspartic Acid/metabolism , Aspartic Acid/pharmacology , Bucladesine/pharmacology , Cell Line, Tumor , Cyclic AMP-Dependent Protein Kinases/metabolism , Dose-Response Relationship, Drug , Enzyme Activation/physiology , Glutamine/metabolism , Humans , Neuroblastoma/pathology , Protein Kinase C/metabolism , Tetradecanoylphorbol Acetate/pharmacology , Time Factors
18.
FASEB J ; 20(12): 2139-41, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16935940

ABSTRACT

Mutations in the gene for aspartoacylase (ASPA), which catalyzes deacetylation of N-acetyl-L-aspartate in the central nervous system (CNS), result in Canavan Disease, a fatal dysmyelinating disease. Consistent with its role in supplying acetate for myelin lipid synthesis, ASPA is thought to be cytoplasmic. Here we describe the occurrence of ASPA within nuclei of rat brain and kidney, and in cultured rodent oligodendrocytes. Immunohistochemistry showed cytoplasmic and nuclear ASPA staining, the specificity of which was demonstrated by its absence from tissues of the Tremor rat, an ASPA-null mutant. Subcellular fractionation analysis revealed low enzyme activity against NAA in nuclear fractions from normal rats. Whereas two recent reports have indicated that ASPA exists as a dimer, size-exclusion chromatography of subcellular fractions showed ASPA is an active monomer in both subcellular fractions. Western blotting detected ASPA as a single 38 kD band. Because ASPA is small enough to passively diffuse into the nucleus, we constructed, expressed, and detected in COS-7 cells a green fluorescent protein-human ASPA (GFP-hASPA) fusion protein larger than the permissible size for the nuclear pore complex. GFP-hASPA was enzymatically active and showed mixed nuclear-cytoplasmic distribution. We conclude that ASPA is a regulated nuclear-cytoplasmic protein that may have distinct functional roles in the two cellular compartments.


Subject(s)
Amidohydrolases/analysis , Active Transport, Cell Nucleus , Amidohydrolases/genetics , Amidohydrolases/isolation & purification , Animals , Brain/enzymology , Cell Fractionation , Cell Nucleus/enzymology , Cytoplasm/enzymology , Green Fluorescent Proteins/genetics , Humans , Kidney/enzymology , Rats , Transfection
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