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1.
J Thromb Haemost ; 10(8): 1675-84, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22712885

ABSTRACT

BACKGROUND: Activated protein C (aPC) mediates powerful cytoprotective effects through the protease-activated receptor-1 (PAR1) that translate into reduced harm in mouse injury models. However, it remains elusive how aPC-activated PAR1 can mediate cytoprotective effects whereas thrombin activation does the opposite. OBJECTIVES: We hypothesized that aPC and thrombin might induce distinct active conformations in PAR1 causing opposing effects. METHODS: We analyzed antibody binding to, and cleavage and signalling of PAR1 in either endogenously expressing endothelial or overexpressing 293T cells. RESULTS: In thrombin-cleaved PAR1 neither the tethered ligand nor the hirudin-like domain were available for anti-PAR1 ATAP2 and WEDE15 binding unless the tethered ligand was quenched. In contrast, aPC irreversibly prevented ATAP2 binding while not affecting WEDE15 binding. Reporter constructs with selective glutamine substitutions confirmed R41 as the only thrombin cleavage site in PAR1, whereas aPC preferentially cleaved at R46. Similarly, we report distinct cleavage sites on PAR3, K38 for thrombin and R41 for aPC. A soluble peptide corresponding to R46-cleaved PAR1 enhanced the endothelial barrier function and reduced staurosporine toxicity in endothelial as well as in 293T cells if PAR1 was expressed. Overexpression of PAR1 variants demonstrated that cleavage at R46 but not R41 is required for cytoprotective aPC signaling. CONCLUSIONS: We provide a novel concept on how aPC and thrombin mediate distinct effects. We propose that the enzyme-specific cleavage sites induce specific conformations which mediate divergent downstream effects. This unexpected model of PAR1 signaling might lead to novel therapeutic options for the treatment of inflammatory diseases.


Subject(s)
Endothelial Cells/metabolism , Peptide Fragments/metabolism , Receptor, PAR-1/metabolism , Amino Acid Sequence , Antibodies/metabolism , Arginine , Binding Sites, Antibody , Cytoprotection , Endothelial Cells/drug effects , Endothelial Cells/pathology , HEK293 Cells , Humans , Indazoles/pharmacology , Molecular Sequence Data , Peptide Fragments/antagonists & inhibitors , Peptide Fragments/chemistry , Peptide Fragments/immunology , Protein C/metabolism , Protein Conformation , RNA Interference , Receptor, PAR-1/antagonists & inhibitors , Receptor, PAR-1/chemistry , Receptor, PAR-1/genetics , Receptor, PAR-1/immunology , Receptors, Thrombin/metabolism , Signal Transduction , Staurosporine/toxicity , Structure-Activity Relationship , Thrombin/metabolism , Transfection , Urea/analogs & derivatives , Urea/pharmacology
2.
Swiss Med Wkly ; 141: w13243, 2011.
Article in English | MEDLINE | ID: mdl-21805405

ABSTRACT

Systemic treatment with bevacizumab is associated with increased rates of arterial and venous thromboembolism and haemorrhage. In order to investigate the pathophysiological mechanism involved, platelet adhesive and aggregatory functions were tested with a platelet function analyser (PFA-100®) in an in vitro study and in a longitudinal clinical observation study. For the in vitro study, blood from ten healthy volunteers was incubated with different concentrations of bevacizumab (0-1000 µg/ml plasma) and vascular endothelial growth factor (0-500 µg/ml). In the clinical observation study, PFA-100® closure times (CTs) and soluble P-selectin (sP-selectin) serum levels as a serological marker of platelet activation were assessed in 20 patients with metastatic cancer who were treated with bevacizumab in addition to cytotoxic chemotherapy. No significant changes of PFA-100® CTs were observed in the in vitro study. In the clinical observation study, mean PFA-100® CTs after treatment with bevacizumab were unchanged. sP-selectin was decreased after bevacizumab infusion by 18% (p = 0.045), which could suggest an inhibitory action on platelets. Our data do not support the view that increased platelet activation or increased platelet adhesiveness and aggregation by bevacizumab are relevant mechanisms for thrombus formation in clinical practice.


Subject(s)
Angiogenesis Inhibitors/pharmacology , Antibodies, Monoclonal, Humanized/pharmacology , Platelet Adhesiveness/drug effects , Platelet Aggregation/drug effects , Adult , Aged , Aged, 80 and over , Antigens/blood , Antigens/immunology , Bevacizumab , Cells, Cultured , Female , Humans , Male , Middle Aged , P-Selectin/blood , Platelet Function Tests , Vascular Endothelial Growth Factor A/pharmacology , von Willebrand Factor/immunology
3.
J Thromb Haemost ; 4(12): 2704-9, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17010150

ABSTRACT

BACKGROUND: Sphingolipids are signaling molecules in a range of biological processes. While sphingosine-1-phosphate (S1P) is thought to be abundantly stored in platelets and released upon stimulation, knowledge about the distribution and function of other sphingolipids in blood is lacking. OBJECTIVES: To analyze the sphingolipid content of blood components with special emphasis on dynamic changes in platelets. METHODS: Blood components from mice and humans were prepared by gradient centrifugation and analyzed by liquid chromatography-mass spectrometry. Additionally, murine platelets were activated in vitro and in vivo. RESULTS: Isolated non-activated platelets of mice were devoid of S1P, but instead contained dihydrosphingosine-1-phosphate (dhS1P), along with a high concentration of ceramide. Activation of platelets in vitro led to a loss of dhS1P and an increase in sphingosine, accompanied by a reduction of ceramide content. Platelet activation in vivo led to an immediate and continuous rise of dhS1P in plasma, while S1P remained stable. The sphingolipid distribution of human blood was markedly different from mice. Human platelets contained dhS1P in addition to S1P. CONCLUSIONS: Mouse platelets contain dhS1P instead of S1P. Platelet activation causes loss of dhS1P and breakdown of ceramide, implying ceramidase activation. Release of dhS1P from activated platelets might be a novel signaling pathway. Finally, the sphingolipid composition of mouse and human blood shows large differences, which must be considered when studying sphingolipid biology.


Subject(s)
Blood Platelets/metabolism , Platelet Activation , Sphingolipids/blood , Animals , Antibodies , Blood Platelets/drug effects , Blood Platelets/immunology , Cell Separation , Ceramides/blood , Chromatography, Liquid , Erythrocytes/chemistry , Flow Cytometry , Humans , In Vitro Techniques , Leukocytes/chemistry , Lysophospholipids/blood , Mice , Mice, Inbred BALB C , Platelet Activation/drug effects , Platelet Activation/immunology , Platelet Membrane Glycoprotein IIb/immunology , Species Specificity , Spectrometry, Mass, Electrospray Ionization , Sphingolipids/metabolism , Sphingosine/analogs & derivatives , Sphingosine/blood , Thrombin/pharmacology
4.
Gene Ther ; 7(12): 1039-45, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10871753

ABSTRACT

The development of efficient and safe methods for in vivo gene transfer is central to the success of gene therapy. Recombinant adenoviral vectors, although highly efficient, are limited by the host immune response, potential safety hazards due to obligatory cotransfer of viral proteins, and their broad tissue tropism. Here, we demonstrate in an animal model that host range and tissue tropism of a recombinant adenovirus from a distant species can be modified by complexing adenovirus with a cell-specific ligand. Thus, a replication-deficient lacZ recombinant human adenovirus, which naturally does not infect avian cells, allowed highly efficient and specific gene transfer to the liver of ducks in vivo when complexed with N-acetylglucosamine, a ligand for the chicken hepatic lectin. This combination of ligand-mediated receptor targeting with adenoviral uptake and intracellular processing of a given gene represents a novel approach to gene therapy of inherited and acquired liver diseases.


Subject(s)
Adenoviridae/genetics , Gene Targeting/methods , Gene Transfer Techniques , Acetylglucosamine/metabolism , Animals , Ducks , Humans , Lectins/metabolism , Ligands , Liver/cytology , Tumor Cells, Cultured
5.
Mol Pharmacol ; 57(3): 634-41, 2000 Mar.
Article in English | MEDLINE | ID: mdl-10692506

ABSTRACT

The multidrug resistance-associated proteins (Mrps) constitute a family of cellular export pumps of the ATP-binding cassette transporter superfamily and play an important role in hepatobiliary excretion. We investigated the transport function and subcellular localization of mrp6, a novel member of the mrp family, in rat liver. Transport studies in vesicles isolated from mrp6 expressing Sf9 cells identified the anionic cyclopentapeptide and endothelin receptor antagonist BQ-123 as a substrate of mrp6 (K(m) approximately 17 microM). Besides BQ-123, which is also a substrate of mrp2 (K(m) approximately 124 microM), no other common substrates were found for mrp2, mrp6, and the canalicular bile salt export pump Bsep. The cyclic peptides endothelin I and Arg(8)-vasopressin were transported by mrp2 but not by mrp6. Using a polyclonal antiserum raised against a C-terminal peptide, mrp6 was found to be localized at the lateral and, to a lesser extent, at the canalicular plasma membrane of hepatocytes. The limited overlap of the substrate specificity with the canalicular export pumps mrp2 and Bsep indicates that mrp6 does not play a major role in canalicular organic anion excretion. However, its dual localization at the lateral and canalicular plasma membrane suggests that mrp6 might fulfill a "housekeeping" transport function involved in the regulation of paracellular and/or transcellular solute movement from blood into bile.


Subject(s)
ATP-Binding Cassette Transporters/metabolism , Liver/metabolism , ATP-Binding Cassette Transporters/genetics , Adenosine Triphosphate/metabolism , Animals , Antihypertensive Agents/metabolism , Base Sequence , Biological Transport/physiology , CHO Cells , COS Cells , Cloning, Molecular , Cricetinae , HeLa Cells , Humans , Insecta , Male , Molecular Sequence Data , Multidrug Resistance-Associated Proteins , Peptides, Cyclic/metabolism , Protein Biosynthesis , RNA, Messenger/genetics , RNA, Messenger/metabolism , Rats , Rats, Sprague-Dawley , Subcellular Fractions , Tissue Distribution , Transcription, Genetic
6.
Gastroenterology ; 118(2): 422-30, 2000 Feb.
Article in English | MEDLINE | ID: mdl-10648470

ABSTRACT

BACKGROUND & AIMS: Drug-induced cholestasis is a frequent form of acquired liver disease. To elucidate the molecular pathogenesis of drug-induced cholestasis, we investigated the effects of prototypic cholestatic drugs on the canalicular bile salt export pump (Bsep) of rat liver. METHODS: Vesicles were isolated from Bsep-, Mrp2-, and Bsep/Mrp2-expressing Sf9 cells. Canalicular plasma membrane (cLPM) vesicles from rat liver and Sf9 cell vesicles were used to study adenosine triphosphate (ATP)-dependent solute uptake by a rapid filtration technique. RESULTS: Bsep-expressing Sf9 cell vesicles showed ATP-dependent transport of numerous monoanionic bile salts with similar Michaelis constant values as in cLPM vesicles, whereas several known substrates of the multispecific organic anion transporter Mrp2 were not transported by Bsep. Cyclosporin A, rifamycin SV, rifampicin, and glibenclamide cis-inhibited Bsep-mediated bile salt transport to similar extents as ATP-dependent taurocholate transport in cLPM vesicles. In contrast, the cholestatic estrogen metabolite estradiol-17beta-glucuronide inhibited ATP-dependent taurocholate transport only in normal cLPM and in Bsep/Mrp2-coexpressing Sf9 cell vesicles, but not in Mrp2-deficient cLPM or in selectively Bsep-expressing Sf9 cell vesicles, indicating that it trans-inhibits Bsep only after its secretion into bile canaliculi by Mrp2. CONCLUSIONS: These results provide a molecular basis for previous in vivo observations and identify Bsep as an important target for induction of drug- and estrogen-induced cholestasis in mammalian liver.


Subject(s)
ATP-Binding Cassette Transporters/physiology , Bile Acids and Salts/metabolism , Carrier Proteins/physiology , Liver/physiology , ATP Binding Cassette Transporter, Subfamily B, Member 11 , ATP-Binding Cassette Transporters/genetics , Adenosine Triphosphate/metabolism , Animals , Anion Transport Proteins , Biological Transport/drug effects , Carrier Proteins/genetics , Cell Line , Cyclosporine/pharmacology , Estradiol/analogs & derivatives , Estradiol/pharmacology , Glyburide/pharmacology , Kinetics , Rats , Recombinant Proteins/metabolism , Rifampin/pharmacology , Rifamycins/pharmacology , Spodoptera , Taurocholic Acid/metabolism , Transfection
7.
J Biol Chem ; 273(16): 10046-50, 1998 Apr 17.
Article in English | MEDLINE | ID: mdl-9545351

ABSTRACT

Canalicular secretion of bile salts is a vital function of the vertebrate liver, yet the molecular identity of the involved ATP-dependent carrier protein has not been elucidated. We cloned the full-length cDNA of the sister of P-glycoprotein (spgp; Mr approximately 160,000) of rat liver and demonstrated that it functions as an ATP-dependent bile salt transporter in cRNA injected Xenopus laevis oocytes and in vesicles isolated from transfected Sf9 cells. The latter demonstrated a 5-fold stimulation of ATP-dependent taurocholate transport as compared with controls. This spgp-mediated taurocholate transport was stimulated solely by ATP, was inhibited by vanadate, and exhibited saturability with increasing concentrations of taurocholate (Km approximately 5 microM). Furthermore, spgp-mediated transport rates of various bile salts followed the same order of magnitude as ATP-dependent transport in canalicular rat liver plasma membrane vesicles, i.e. taurochenodeoxycholate > tauroursodeoxycholate = taurocholate > glycocholate = cholate. Tissue distribution assessed by Northern blotting revealed predominant, if not exclusive, expression of spgp in the liver, where it was further localized to the canalicular microvilli and to subcanalicular vesicles of the hepatocytes by in situ immunofluorescence and immunogold labeling studies. These results indicate that the sister of P-glycoprotein is the major canalicular bile salt export pump of mammalian liver.


Subject(s)
ATP-Binding Cassette Transporters/metabolism , Bile Acids and Salts/metabolism , Bile Canaliculi/metabolism , Liver/metabolism , ATP Binding Cassette Transporter, Subfamily B, Member 11 , ATP-Binding Cassette Transporters/chemistry , Adenosine Triphosphate/metabolism , Amino Acid Sequence , Animals , Cell Line , Cloning, Molecular , DNA Primers , Female , Kinetics , Molecular Sequence Data , Oocytes/physiology , Polymerase Chain Reaction , Rats , Recombinant Proteins/metabolism , Spodoptera , Taurocholic Acid/metabolism , Transfection , Xenopus laevis
8.
FEBS Lett ; 406(1-2): 75-8, 1997 Apr 07.
Article in English | MEDLINE | ID: mdl-9109389

ABSTRACT

The rat hepatocanalicular isoform (called mrp2) of the human multidrug resistance-associated protein (MRP) has been cloned and transiently expressed in COS-7 cells and in Xenopus laevis oocytes. In both systems mrp2 expression induced a markedly increased efflux of intracellularly formed [14C]2,4-dinitrophenyl-S-glutathione. Injection of mrp2 cRNA into oocytes also stimulated efflux of [3H(N)]leukotriene C4. Furthermore, mrp2 mRNA was markedly decreased in the liver of the transport mutant TR rat, which has a congenital defect in the biliary excretion of glutathione-S conjugates and of other divalent organic anions. The study provides a direct demonstration of mrp2-mediated transport function and supports the concept that mrp2 represents the canalicular multispecific organic anion transporter (cMOAT) of mammalian liver.


Subject(s)
ATP-Binding Cassette Transporters/genetics , Bile Canaliculi/metabolism , Liver/metabolism , Animals , Biological Transport , Cell Line , Cloning, Molecular , Dinitrochlorobenzene/metabolism , Humans , Leukotriene C4/metabolism , Male , Multidrug Resistance-Associated Proteins , Rats , Rats, Sprague-Dawley
9.
Hepatology ; 24(3): 474-81, 1996 Sep.
Article in English | MEDLINE | ID: mdl-8781310

ABSTRACT

A highly efficient receptor-mediated delivery system for DNA and oligodeoxynucleotides (ODNs) to avian liver cells has been established, using complexes of nonmodified human adenovirus particles and a protein conjugate consisting of N-acetyl-glucosamine-modified bovine serum albumin, streptavidin, and Poly-L-lysine. The newly developed method of protein-conjugate preparation and purification yielded highly stable complexes with high DNA delivery efficiency for constructs expressing the lacZ gene, hepatitis B virus (HBV) DNA, and ODNs. Using this delivery system, an antisense ODN targeted to the encapsidation site of the HBV pregenome causes strong inhibition of HBV replication in vitro. The described, receptor-mediated DNA delivery method should prove useful for investigations of HBV replication, gene expression, and mode of action of antiviral agents in vitro, as well as for model studies of gene therapy for liver diseases from various etiologies, including viral hepatitides.


Subject(s)
DNA, Viral/administration & dosage , Gene Transfer Techniques , Hepatitis B virus/genetics , Liver , Oligonucleotides, Antisense/administration & dosage , Receptors, Cell Surface/metabolism , Animals , Base Sequence , Chickens , Liver/cytology , Molecular Sequence Data , Oligonucleotides, Antisense/genetics , Oligonucleotides, Antisense/pharmacology , Virus Replication/drug effects
10.
Plasmid ; 34(2): 96-104, 1995 Sep.
Article in English | MEDLINE | ID: mdl-8559807

ABSTRACT

Amycolatopsis methanolica contains a 13.29-kb plasmid (pMEA300) present both in the free state and integrated at a unique genomic location. A pMEA300-free derivative (strain WV1) was selected, allowing further analysis of pMEA300-encoded functions. Whole cells of strain WV1 could be transformed at high frequencies (approximately 10(6) transformants per microgram of plasmid DNA) with both circular and linear plasmid DNA, provided that the pMEA300-encoded stf (stimulation of transformation frequency) gene was present. stf would encode a putative protein of 373 amino acids with M(r) 40,201, resembling putative regulatory proteins involved in sporulation of Streptomyces griseus and Streptomyces coelicolor.


Subject(s)
Actinobacteria/genetics , Genes, Bacterial , Plasmids/genetics , Transformation, Genetic , Amino Acid Sequence , Bacterial Proteins/genetics , Base Sequence , DNA, Bacterial/genetics , Molecular Sequence Data , Open Reading Frames , Restriction Mapping , Sequence Homology, Amino Acid , Streptomyces/genetics , Streptomyces griseus/genetics
11.
J Bacteriol ; 176(22): 7087-90, 1994 Nov.
Article in English | MEDLINE | ID: mdl-7961475

ABSTRACT

Amycolatopsis methanolica contains a 13.3-kb plasmid (pMEA300) which is present both in the free state and integrated at a unique genomic location. A 2.1-kb pMEA300 DNA fragment was sequenced, revealing the putative attP site and two open reading frames, xis and int, showing similarity to genes encoding excisionases and integrases, respectively.


Subject(s)
Actinobacteria/genetics , DNA Transposable Elements/genetics , Plasmids/genetics , Recombination, Genetic/genetics , Viral Proteins , Amino Acid Sequence , Base Sequence , Binding Sites , DNA Nucleotidyltransferases/genetics , Integrases , Methanol/metabolism , Molecular Sequence Data , Sequence Analysis, DNA , Sequence Homology, Amino Acid
12.
J Bacteriol ; 173(20): 6325-31, 1991 Oct.
Article in English | MEDLINE | ID: mdl-1655706

ABSTRACT

A new procedure for transformation of Amycolatopsis (Nocardia) mediterranei LBG A3136 was developed. The method makes use of polyethylene glycol and alkaline cations and enables direct transformation of the A. mediterranei mycelium with high efficiency: more than 10(6) transformants per microgram of DNA were obtained. Transformation of A. mediterranei is stimulated by the ionophore antibiotic valinomycin and abolished by arsenate and p-chloromercuribenzenesulfonate. pMEA123, a vector based on the indigenous plasmid pMEA100 and containing the erythromycin resistance gene, was constructed.


Subject(s)
Nocardia/genetics , Transformation, Bacterial , 4-Chloromercuribenzenesulfonate/pharmacology , Arsenates/pharmacology , Blotting, Southern , Cations/pharmacology , Drug Resistance, Microbial/genetics , Electrophoresis, Agar Gel , Erythromycin/pharmacology , Kinetics , Plasmids/genetics , Polyethylene Glycols/pharmacology , Transformation, Bacterial/drug effects , Valinomycin/pharmacology
13.
Plasmid ; 24(2): 132-42, 1990 Sep.
Article in English | MEDLINE | ID: mdl-2096399

ABSTRACT

An amplification of a 2.0-kb fragment was found on the plasmid pMEA100 isolated from a subculture of the wild-type strain LBG A3136 of Amycolatopsis (Nocardia) mediterranei. Plasmid preparations contained a mixture of molecules with copy numbers of the amplified unit in the range of 2 to 10. The amplification on pMEA100 was stable; propagation of cells for many generations did not change the pattern of the amplified DNA. Fragments of the plasmids containing the amplifiable unit of DNA (AUD) and the amplified DNA sequence (ADS) were subcloned and characterized. Sequencing of the AUD terminal regions and the junction between ADS units showed that the amplifiable unit of DNA was flanked by 12-bp direct repeats. The DNA segments adjacent to the 12-bp sequence common to the left and right AUD terminal regions also showed significant similarities. In addition, the left AUD terminal region flanking the 12-bp repeat exhibited considerable sequence similarity to actinomycete plasmid attachment sites, particularly to the pMEA 100 att site.


Subject(s)
Actinomycetales/genetics , Nocardia/genetics , Plasmids , Attachment Sites, Microbiological/genetics , Base Sequence , DNA, Bacterial/genetics , Gene Amplification , Genes, Bacterial , Molecular Sequence Data , Nucleic Acid Conformation , Sequence Homology, Nucleic Acid
14.
Mol Gen Genet ; 218(1): 169-76, 1989 Jul.
Article in English | MEDLINE | ID: mdl-2779515

ABSTRACT

Streptomyces glaucescens GLA000 contains the integrated 15 kb DNA element pIJ408 which, during mating of the parent strain with S. lividans, can be transferred into recipient cells. In S. lividans cells, pIJ408 was found in an autonomously replicating form and in a chromosomally integrated state. In the majority of the S. lividans transconjugants studied, a deletion derivative pIJ408.1 (12.4 kb) occurred. The deletion form was found in some strains only as a free plasmid, in others it was also chromosomally integrated. The integration region of pIJ408 was subcloned and precisely mapped by hybridization, restriction and sequencing analyses. The DNA junction fragments of the integrated plasmid in S. glaucescens, as well as the DNA fragment containing the attachment site of the S. lividans chromosome, were also cloned, submitted to detailed restriction analysis and sequenced. The attachment site of pIJ408 (attP) and the junctions of its integrated form with the chromosomal DNA in S. glaucescens (attL and attR) contain an identical 43 bp sequence. The chromosomal attachment site in S. lividans (attB) differs from the S. glaucescens att sequence by a single base substitution. The similarities between attachment sites of SLP1, pMEA100, pSAM2 and pIJ408 are discussed.


Subject(s)
Conjugation, Genetic , DNA, Bacterial/genetics , Plasmids , Recombination, Genetic , Streptomyces/genetics , Base Sequence , Blotting, Southern , Cloning, Molecular , Molecular Sequence Data , Restriction Mapping , Sequence Homology, Nucleic Acid
15.
J Bacteriol ; 170(1): 478-81, 1988 Jan.
Article in English | MEDLINE | ID: mdl-2447065

ABSTRACT

The cryptic multicopy plasmid pME2001 of Methanobacterium thermoautotrophicum Marburg encodes a 611-base-pair transcript containing several consecutive, short open reading frames. Scrutiny of the 5'-flanking region did not reveal homology to putative archaebacterial consensus promoter sequences. However, 28 base pairs upstream of the transcription start point, there was a sequence with strong homology to a sequence preceding the purE gene of M. thermoautotrophicum.


Subject(s)
Euryarchaeota/genetics , Plasmids , Promoter Regions, Genetic , RNA, Bacterial/genetics , Base Sequence , DNA, Bacterial/genetics , Molecular Sequence Data , Nucleic Acid Hybridization , Sequence Homology, Nucleic Acid , Transcription, Genetic
16.
Mol Gen Genet ; 209(2): 257-64, 1987 Sep.
Article in English | MEDLINE | ID: mdl-2823074

ABSTRACT

Nocardia mediterranei strain LBG A3136 contains the 23.7 kb element pMEA100 in a chromosomally integrated form as well as in the free state (Moretti et al. 1985). The integrated form of this element can be excised precisely from the Nocardia chromosome without any accompanying rearrangements in flanking chromosomal DNA. After transfer into plasmid-free mutant strains, pMEA100 reintegrates site specifically into its original chromosomal locus. The exact mapping of the pMEA100 integration site was accomplished by restriction analysis and DNA sequencing. The attachment site of pMEA100, the junctions of its integrated form and plasmid-free chromosomal DNA of N. mediterranei contain an identical 47 bp long sequence which is probably required for site-specific recombination connected with integration and excision of pMEA100. Only one such sequence was found in the chromosome of pMEA100-free N. mediterranei derivatives as suggested by the single integration locus.


Subject(s)
Nocardia/genetics , Plasmids , Base Sequence , Cloning, Molecular , Cosmids , DNA Restriction Enzymes , Escherichia coli/genetics , Genes, Bacterial , Molecular Sequence Data
17.
Biol Chem Hoppe Seyler ; 367(6): 473-81, 1986 Jun.
Article in English | MEDLINE | ID: mdl-3091049

ABSTRACT

The DNA-dependent RNA polymerases of members of the three orders of methanogens were purified and their enzymatic properties described. The enzymes consist of 7-8 polypeptides. Although these differed in molecular mass, the four heaviest components could be allied to components of the enzyme of Methanobacterium thermoautotrophicum, W by cross-reaction with antibodies directed against the denatured polypeptides of this enzyme. The antisera against native RNA polymerases isolated from representatives of the different orders, on the other hand, gave rise to serological cross-reaction between different genera but not between different families and orders. These antisera are thus useful for taxonomic purposes. The RNA polymerase of the extreme thermophile Methanothermus fervidus shows a rather low thermostability. No factors having a stabilizing influence on the enzyme could be detected.


Subject(s)
DNA-Directed RNA Polymerases/metabolism , Euryarchaeota/enzymology , Cross Reactions , Electrophoresis, Polyacrylamide Gel , Hydrogen-Ion Concentration , Immunodiffusion , Macromolecular Substances , Magnesium/pharmacology , Magnesium Chloride , Molecular Weight , Potassium Chloride/pharmacology , Temperature
18.
Eur J Biochem ; 135(2): 279-83, 1983 Sep 15.
Article in English | MEDLINE | ID: mdl-6884365

ABSTRACT

Pure and absolutely DNA-dependent RNA polymerase has been isolated from the extremely halophilic archaebacterium, Halococcus morrhuae. It is composed of five heavy (142 000; 88 000; 73 000; 52 500; and 49 500 Da) and five small components (13 300; 11 200; 10 800; 10 500; 9 900 Da). The peptides of 49 500 Da and 52 500 Da probably represent one component in different modification states. Single-stranded DNA shows the highest template efficiency, although archaebacterial chromosomal DNAs are efficiently transcribed. Rifampicin, streptolydigin and alpha-amanitin do not inhibit transcription by this enzyme. Heparin permits elongation but not initiation of transcription. The activity of H. morrhuae RNA polymerase is strongly stimulated by glycerol and dimethylsulfoxide.


Subject(s)
DNA-Directed RNA Polymerases/isolation & purification , Halobacteriaceae/enzymology , Bacterial Proteins/isolation & purification , Chemical Phenomena , Chemistry , Dimethyl Sulfoxide/pharmacology , Electrophoresis, Polyacrylamide Gel , Glycerol/pharmacology , Halobacterium/enzymology , Heparin/pharmacology , Peptides/isolation & purification , Transcription, Genetic
19.
Eur J Biochem ; 133(2): 471-4, 1983 Jun 15.
Article in English | MEDLINE | ID: mdl-6852054

ABSTRACT

A revised procedure for the purification of DNA-dependent RNA polymerase from Halobacterium halobium, including two-phase partition, yields pure, highly active and absolutely DNA-dependent enzyme. Two forms of the enzyme, one containing, the other not containing a previously not observed component, epsilon, show striking differences in activity. RNA polymerase without component epsilon has a significant activity on poly[d(A-T)] but only insignificant activity on all other templates. The enzyme containing a stoichiometric amount of component epsilon transcribes poly[d(A-T)] and native templates efficiently.


Subject(s)
DNA, Bacterial/metabolism , DNA-Directed RNA Polymerases/isolation & purification , Halobacterium/enzymology , Transcription, Genetic , Chemical Phenomena , Chemistry
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