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1.
Phys Rev E ; 109(3-1): 034202, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38632765

ABSTRACT

We study the multifractal behavior of coherent states projected in the energy eigenbasis of the spin-boson Dicke Hamiltonian, a paradigmatic model describing the collective interaction between a single bosonic mode and a set of two-level systems. By examining the linear approximation and parabolic correction to the mass exponents, we find ergodic and multifractal coherent states and show that they reflect details of the structure of the classical phase space, including chaos, regularity, and features of localization. The analysis of multifractality stands as a sensitive tool to detect changes and structures in phase space, complementary to classical tools to investigate it. We also address the difficulties involved in the multifractal analyses of systems with unbounded Hilbert spaces.

2.
Protoplasma ; 260(5): 1407-1420, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37097493

ABSTRACT

Micro-ornamentations characterize the surface of scales in lepidosaurians and are summarized in four main patterns, i.e., spinulated, lamellated, lamellate-dentate, and honeycomb, although variations of these patterns are present in different species. Although geckos are known to possess a spinulated pattern derived from the Oberhautchen layer, also other pattern variations of the spinulated micro-ornamentation are present such as those indicated as dendritic ramification, corneous belts, and small bare patches. The present study mainly describes the variation of micro-ornamentations present in scales of different skin regions in the Mediterranean gecko Tarentula mauritanica using scannig and transmission electron microscopy. The study reports that the accumulation of corneous material in Oberhautchen cells is not homogenous in different areas of body scales and, when mature, this process gives rise to different sculpturing on the epidermal surface generating not only spinulae but also transitional zones leading to the other main patterns. It is hypothesized that spinulae formation derives from the vertical and lateral symmetric growth of tubercolate, non-overlapped scales of geckos. Sparse areas also result smooth or with serpentine-ridges likely revealing the beta-layer located underneath and merged with the Oberhautchen. The eco-functional role of this variable micro-ornamentation in the skin of lizards however remains largely speculative.


Subject(s)
Epidermis , Lizards , Animals , Epidermal Cells
3.
Sep Purif Technol ; 294: 121180, 2022 Aug 01.
Article in English | MEDLINE | ID: mdl-35573908

ABSTRACT

The outbreak of SARS-CoV-2 pandemic highlighted the worldwide lack of surgical masks and personal protective equipment, which represent the main defense available against respiratory diseases as COVID-19. At the time, masks shortage was dramatic in Italy, the first European country seriously hit by the pandemic: aiming to address the emergency and to support the Italian industrial reconversion to the production of surgical masks, a multidisciplinary team of the University of Bologna organized a laboratory to test surgical masks according to European regulations. The group, driven by the expertise of chemical engineers, microbiologists, and occupational physicians, set-up the test lines to perform all the functional tests required. The laboratory started its activity on late March 2020, and as of the end of December of the same year 435 surgical mask prototypes were tested, with only 42 masks compliant to the European standard. From the analysis of the materials used, as well as of the production methods, it was found that a compliant surgical mask is most likely composed of three layers, a central meltblown filtration layer and two external spunbond comfort layers. An increase in the material thickness (grammage), or in the number of layers, does not improve the filtration efficiency, but leads to poor breathability, indicating that filtration depends not only on pure size exclusion, but other mechanisms are taking place (driven by electrostatic charge). The study critically reviewed the European standard procedures, identifying the weak aspects; among the others, the control of aerosol droplet size during the bacterial filtration test results to be crucial, since it can change the classification of a mask when its performance lies near to the limiting values of 95 or 98%.

4.
Lett Appl Microbiol ; 75(3): 565-577, 2022 Sep.
Article in English | MEDLINE | ID: mdl-34687563

ABSTRACT

This study aimed to evaluate the inhibitory effects of phenolic-rich extracts from acerola (Malpighia emarginata D.C., PEA), cashew apple (Anacardium occidentale L., PEC) and mango (Mangifera indica L., PEM) by-products on distinct enterotoxigenic Escherichia coli (ETEC) strains. The capability of PEA and PEC of impairing various physiological functions of ETEC strains was investigated with multiparametric flow cytometry. Procyanidin B2 , myricetin and p-coumaric acid were the major phenolic compounds in PEA, PEC and PEM, respectively. PEA and PEC had lower minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) (MIC: 31·25 mg ml-1 ; MBC: 62·5 mg ml-1 ) on ETEC strains than PEM (MIC and MIC: >1000 mg ml-1 ). PEA and PEC (15·6, 31·2, 62·5 mg ml-1 ) caused viable count reductions (P < 0·05) on ETEC strains after 24 h of exposure, notably the ≥3 log reductions caused by 62·5 mg ml-1 . The 24 h exposure of ETEC strains to PEA and PEC (31·2, 62·5 mg ml-1 ) led to high sizes of cell subpopulations with concomitant impairments in cell membrane polarization and permeability, as well as in enzymatic, respiratory and efflux activities. PEA and PEC are effective in inhibiting ETEC through a multi-target action mode with disturbance in different physiological functions.


Subject(s)
Anacardium , Enterotoxigenic Escherichia coli , Escherichia coli Infections , Mangifera , Phenols/pharmacology , Plant Extracts/pharmacology
5.
Phys Rev E ; 103(5-1): 052214, 2021 May.
Article in English | MEDLINE | ID: mdl-34134277

ABSTRACT

Measuring the degree of localization of quantum states in phase space is essential for the description of the dynamics and equilibration of quantum systems, but this topic is far from being understood. There is no unique way to measure localization, and individual measures can reflect different aspects of the same quantum state. Here we present a general scheme to define localization in measure spaces, which is based on what we call Rényi occupations, from which any measure of localization can be derived. We apply this scheme to the four-dimensional unbounded phase space of the interacting spin-boson Dicke model. In particular, we make a detailed comparison of two localization measures based on the Husimi function in the regime where the model is chaotic, namely, one that projects the Husimi function over the finite phase space of the spin and another that uses the Husimi function defined over classical energy shells. We elucidate the origin of their differences, showing that in unbounded spaces the definition of maximal delocalization requires a bounded reference subspace, with different selections leading to contextual answers.

6.
J Appl Microbiol ; 131(4): 1983-1997, 2021 Oct.
Article in English | MEDLINE | ID: mdl-33704882

ABSTRACT

AIMS: To investigate the probiotic potential of yeasts isolated from naturally fermented Brazilian table olives. METHODS AND RESULTS: Eighteen yeast strains were tested in terms of: safety; survival of gastrointestinal and digestion conditions; antimicrobial activity; cellular hydrophobicity; autoaggregation ability and adhesion to epithelial cells; coaggregation and inhibition of pathogenic bacteria adhesion. Six yeasts showed favourable results for all probiotic attributes: Saccharomyces cerevisiae CCMA 1746, Pichia guilliermondii CCMA 1753, Candida orthopsilosis CCMA 1748, Candida tropicalis CCMA 1751, Meyerozyma caribbica CCMA 1758 and Debaryomyces hansenii CCMA 1761. These yeasts demonstrated resistance to 37°C, pH 2·0 and bile salts, and survived in vitro digestion (≥106  CFU per ml). Furthermore, the yeasts exhibited a hydrophobic cell surface (42·5-92·2%), autoaggregation capacity (41·0-91·0%) and adhesion to Caco-2 (62·0-82·8%) and HT-29 (57·6-87·3%) epithelial cell lines. Also, the strains showed antimicrobial activity against Salmonella Enteritidis as well as the ability to coaggregate and reduce the adhesion of this pathogen to intestinal cells. CONCLUSIONS: Autochthonous yeasts from naturally fermented Brazilian table olives have probiotic properties, with potential for development of new probiotic food products. SIGNIFICANCE AND IMPACT OF STUDY: These data are important and contribute to the knowledge of new potential probiotic yeasts capable of surviving gastrointestinal tract conditions and inhibiting pathogenic bacteria.


Subject(s)
Olea , Probiotics , Bacterial Adhesion , Caco-2 Cells , Fermentation , Humans , Saccharomyces cerevisiae , Saccharomycetales , Yeasts
7.
Phys Rev Lett ; 126(1): 017401, 2021 Jan 08.
Article in English | MEDLINE | ID: mdl-33480782

ABSTRACT

The quest to realize strongly interacting photons remains an outstanding challenge both for fundamental science and for applications. Here, we explore mediated photon-photon interactions in a highly imbalanced two-component mixture of exciton polaritons in a semiconductor microcavity. Using a theory that takes into account nonperturbative correlations between the excitons as well as strong light-matter coupling, we demonstrate the high tunability of an effective interaction between quasiparticles formed by minority component polaritons interacting with a Bose-Einstein condensate (BEC) of a majority component polaritons. In particular, the interaction, which is mediated by sound modes in the BEC can be made strong enough to support a bound state of two quasiparticles. Since these quasiparticles consist partly of photons, this in turn corresponds to a dimer state of photons propagating through the BEC. This gives rise to a new light transmission line where the dimer wave function is directly mapped onto correlations between the photons. Our findings open new routes for highly nonlinear optical materials and novel hybrid light-matter quantum systems.

8.
J Appl Microbiol ; 130(4): 1323-1336, 2021 Apr.
Article in English | MEDLINE | ID: mdl-32808408

ABSTRACT

AIMS: This study evaluated whether by-products from industrial processing of acerola (Malpighia glabra L.; AB) and guava (Psidium guajava L.; GB) fruit may stimulate the growth and metabolism of probiotic Lactobacillus and Bifidobacterium and induce changes in human colonic microbiota. METHODS AND RESULTS: The ability of non-digested and digested AB or GB to stimulate the growth ad metabolism of Lactobacillus acidophilus LA-05, Lactobacillus casei L-26 and Bifidobacterium animalis subsp. lactis BB-12 was evaluated. Changes in populations of distinct bacterial groups of human colonic microbiota induced by digested AB and GB were evaluated using an in vitro colonic fermentation system. Non-digested and digested AB and GB favoured probiotic growth. No difference among counts of probiotics in media with glucose, fructooligosaccharides and non-digested and digested AB and GB was found during a 48-h cultivation. Cultivation of probiotics in media with non-digested and digested AB and GB resulted in decreased pH, increased organic acid production and sugar consumption over time. Digested AB and GB caused overall beneficial changes in abundance of Bifidobacterium spp., Lactobacillus-Enterococcus, Eubacterium rectall-Clostridium coccoides and Bacteroides-Provotella populations, besides to decrease the pH and increase the short-chain fatty acid production during a 24-h in vitro colonic fermentation. CONCLUSION: AB and GB could be novel prebiotic ingredients because they can stimulate the growth and metabolism of probiotics and induce overall beneficial changes in human colonic microbiota. SIGNIFICANCE AND IMPACT OF THE STUDY: AB and GB stimulated the growth and metabolism of probiotics, in addition to induce beneficial alterations in human colonic microbiota composition and increase short-chain fatty acid production. These results characterize AB and GB as potential prebiotic ingredients and fruit processing by-products as sources of added-value compounds.


Subject(s)
Bifidobacterium animalis/growth & development , Colon/microbiology , Lactobacillus/growth & development , Malpighiaceae/metabolism , Prebiotics/analysis , Probiotics/analysis , Psidium/metabolism , Waste Products/analysis , Bifidobacterium animalis/metabolism , Clostridiales , Fatty Acids, Volatile/metabolism , Fermentation , Fruit/chemistry , Fruit/metabolism , Gastrointestinal Microbiome , Humans , Lactobacillus/metabolism , Lactobacillus acidophilus/growth & development , Malpighiaceae/chemistry , Oligosaccharides/analysis , Oligosaccharides/metabolism , Probiotics/metabolism , Psidium/chemistry
9.
J Appl Microbiol ; 128(2): 376-386, 2020 Feb.
Article in English | MEDLINE | ID: mdl-31448524

ABSTRACT

AIMS: This study evaluated the efficacy of essential oil from Origanum vulgare L. (oregano; OVEO) and Rosmarinus officinalis L. (rosemary; ROEO) to inactivate sessile cells of Salmonella enterica serovar Enteritidis 86 (SE86) in young and mature biofilms formed on stainless steel. METHODS AND RESULTS: Ultrastructural alterations and damage in different physiological functions caused by OVEO and ROEO in noncultivable sessile cells of SE86 were investigated using scanning electron microscopy and flow cytometry. OVEO (2·5 µl ml-1 ) and ROEO (40 µl ml-1 ) were effective to eradicate young and mature biofilms formed by SE86 sessile cells on stainless steel surfaces; however, the efficacy varied with exposure time. OVEO and ROEO caused alterations in morphology of SE86 sessile cells, inducing the occurrence of bubbles or spots on cell surface. OVEO and ROEO compromised membrane polarization, permeability and efflux activity in noncultivable SE86 sessile cells. These findings show that OVEO and ROEO act by a multitarget mechanism on SE86 membrane functions. CONCLUSIONS: ROEO and OVEO showed efficacy to eradicate SE86 sessile cells in preformed biofilms on stainless steel, displaying a time-dependent effect and multitarget action mode on bacterial cell membrane. SIGNIFICANCE AND IMPACT OF THE STUDY: The study provides for the first time the effects of OVEO and ROEO on morphology and physiological functions of noncultivable sessile cells of S. Enteritidis biofilms preformed on stainless steel surfaces.


Subject(s)
Biofilms/drug effects , Oils, Volatile/pharmacology , Origanum/chemistry , Plant Oils/pharmacology , Rosmarinus/chemistry , Salmonella enteritidis/drug effects , Salmonella enteritidis/growth & development , Salmonella enteritidis/physiology , Stainless Steel/analysis
10.
Phys Rev E ; 100(1-1): 012218, 2019 Jul.
Article in English | MEDLINE | ID: mdl-31499773

ABSTRACT

Quantum systems whose classical counterparts are chaotic typically have highly correlated eigenvalues and level statistics that coincide with those from ensembles of full random matrices. A dynamical manifestation of these correlations comes in the form of the so-called correlation hole, which is a dip below the saturation point of the survival probability's time evolution. In this work, we study the correlation hole in the spin-boson (Dicke) model, which presents a chaotic regime and can be realized in experiments with ultracold atoms and ion traps. We derive an analytical expression that describes the entire evolution of the survival probability and allows us to determine the time scales of its relaxation to equilibrium. This expression shows remarkable agreement with our numerical results. While the initial decay and the time to reach the minimum of the correlation hole depend on the initial state, the dynamics beyond the hole up to equilibration is universal. We find that the relaxation time of the survival probability for the Dicke model increases linearly with system size.

11.
Phys Rev E ; 99(3-1): 033110, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30999487

ABSTRACT

The dynamics of Rayleigh-Taylor turbulence convection in the presence of an alternating, time-periodic acceleration is studied by means of extensive direct numerical simulations of the Boussinesq equations. Within this framework, we discover a mechanism of relaminarization of turbulence: the alternating acceleration, which initially produces a growing turbulent mixing layer, at longer times suppresses turbulent fluctuation and drives the system toward an asymptotic stationary configuration. Dimensional arguments and linear stability theory are used to predict the width of the mixing layer in the asymptotic state as a function of the period of the acceleration.

12.
Acta Otorhinolaryngol Ital ; 38(3): 204-213, 2018 Jun.
Article in English | MEDLINE | ID: mdl-29984796

ABSTRACT

SUMMARY: The objective of this work is to evaluate the safety, feasibility and efficacy of trans-nasal fiberendoscopic injection laryngoplasty (IL) with centrifuged autologous fat, performed under local anaesthesia, in the treatment of glottic insufficiency due to unilateral vocal fold paralysis (UVFP). It is a within-subject study with follow-up 1 week after phonosurgery and after 6 months. A total of 22 patients with chronic dysphonia caused by glottic insufficiency due to UVFP were enrolled. Each patient underwent trans-nasal IL with centrifuged autologous fat through flexible operative endoscope under local anaesthesia and was evaluated before and twice (1 week and 6 months) after phonosurgery, using a multidimensional set of investigations. The assessment protocol included videolaryngostroboscopy, perceptual evaluation of dysphonia, maximum phonation time and patient's self-assessment on voice-related quality of life (QOL) with the Voice Handicap Index-10 and the comparative self-assessment on vocal fatigue and voice quality pre-post treatment. Trans-nasal IL with centrifuged autologous fat was performed in all 22 patients and there were no complications in any case. Significant improvements in videolaryngostroboscopic findings, perceptual evaluation of dysphonia, maximum phonation time and QoL self-assessment were reported after 1 week and were maintained at 6 months. In one patient, the result after 6 months was not satisfactory and this patient then underwent a medialization laryngoplasty (thyroplasty type I) with satisfactory long-term results. In conclusion, trans-nasal fiberendoscopic IL with centrifuged autologous fat seems to be a safe, feasible and efficacious phonosurgical procedure for treatment of glottic insufficiency due to unilateral vocal fold paralysis.


Subject(s)
Adipose Tissue/transplantation , Glottis , Laryngeal Diseases/etiology , Laryngeal Diseases/surgery , Laryngoplasty , Laryngoscopy , Vocal Cord Paralysis/complications , Adult , Aged , Centrifugation , Feasibility Studies , Female , Fiber Optic Technology , Humans , Injections , Laryngoplasty/adverse effects , Laryngoplasty/methods , Male , Middle Aged , Natural Orifice Endoscopic Surgery , Nose , Treatment Outcome
13.
Pharmacogenomics J ; 18(3): 444-449, 2018 05 22.
Article in English | MEDLINE | ID: mdl-29205204

ABSTRACT

We evaluated the impact of genomic polymorphisms in folate-metabolizing, DNA synthesis and DNA repair enzymes on the clinical outcome of 108 patients with myelodysplastic syndromes (MDS) receiving best supportive care (BSC) or azacitidine. A statistically significant association between methylenetetrahydrofolate reductase (MTHFR) 677T/T, thymidylate synthase (TS) 5'-untranslated region (UTR) 3RG, TS 3'-UTR -6 bp/-6 bp, XRCC1 399G/G genotypes and short survival was found in patients receiving BSC by multivariate analysis (P<0.001; P=0.026; P=0.058; P=0.024). MTHFR 677T/T, TS 3'-UTR -6 bp/-6 bp and XRCC1 399G/G genotypes were associated with short survival in patients receiving azacitidine by multivariate analysis (P<0.001; P=0.004; P=0.002). We then performed an exploratory analysis to evaluate the effect of the simultaneous presence of multiple adverse variant genotypes. Interestingly, patients with ⩾1 adverse genetic variants had a short survival, independently from their International Prognostic Scoring System (IPSS) and therapy received. To our knowledge, this is the first study showing that polymorphisms in folate-metabolizing pathway, DNA synthesis and DNA repair genes could influence survival of MDS patients.


Subject(s)
Methylenetetrahydrofolate Reductase (NADPH2)/genetics , Myelodysplastic Syndromes/drug therapy , Thymidylate Synthase/genetics , X-ray Repair Cross Complementing Protein 1/genetics , Aged , Antineoplastic Combined Chemotherapy Protocols/administration & dosage , Antineoplastic Combined Chemotherapy Protocols/adverse effects , Azacitidine/administration & dosage , Azacitidine/adverse effects , Female , Genetic Association Studies , Genotype , Humans , Male , Middle Aged , Myelodysplastic Syndromes/genetics , Myelodysplastic Syndromes/pathology , Palliative Care , Polymorphism, Single Nucleotide
14.
Br J Cancer ; 117(9): 1269-1277, 2017 Oct 24.
Article in English | MEDLINE | ID: mdl-29065426

ABSTRACT

BACKGROUND: Dihydropyrimidine dehydrogenase (DPD) catabolises ∼85% of the administered dose of fluoropyrimidines. Functional DPYD gene variants cause reduced/abrogated DPD activity. DPYD variants analysis may help for defining individual patients' risk of fluoropyrimidine-related severe toxicity. METHODS: The TOSCA Italian randomised trial enrolled colon cancer patients for 3 or 6 months of either FOLFOX-4 or XELOX adjuvant chemotherapy. In an ancillary pharmacogenetic study, 10 DPYD variants (*2A rs3918290 G>A, *13 rs55886062 T>G, rs67376798 A>T, *4 rs1801158 G>A, *5 rs1801159 A>G, *6 rs1801160 G>A, *9A rs1801265 T>C, rs2297595 A>G, rs17376848 T>C, and rs75017182 C>G), were retrospectively tested for associations with ⩾grade 3 fluoropyrimidine-related adverse events (FAEs). An association analysis and a time-to-toxicity (TTT) analysis were planned. To adjust for multiple testing, the Benjamini and Hochberg's False Discovery Rate (FDR) procedure was used. RESULTS: FAEs occurred in 194 out of 508 assessable patients (38.2%). In the association analysis, FAEs occurred more frequently in *6 rs1801160 A allele carriers (FDR=0.0083). At multivariate TTT analysis, significant associations were found for *6 rs1801160 A allele carriers (FDR<0.0001), *2A rs3918290 A allele carriers (FDR<0.0001), and rs2297595 GG genotype carriers (FDR=0.0014). Neutropenia was the most common FAEs (28.5%). *6 rs1801160 (FDR<0.0001), and *2A rs3918290 (FDR=0.0004) variant alleles were significantly associated with time to neutropenia. CONCLUSIONS: This study adds evidence on the role of DPYD pharmacogenetics for safety of patients undergoing fluoropyrimidine-based chemotherapy.


Subject(s)
Antineoplastic Combined Chemotherapy Protocols/adverse effects , Colonic Neoplasms/pathology , Dihydrouracil Dehydrogenase (NADP)/genetics , Neutropenia/diagnosis , Pharmacogenetics , Polymorphism, Single Nucleotide/genetics , Aged , Biomarkers, Tumor/genetics , Colonic Neoplasms/drug therapy , Colonic Neoplasms/genetics , Female , Follow-Up Studies , Humans , Male , Middle Aged , Neoplasm Staging , Neutropenia/chemically induced , Neutropenia/genetics , Prognosis , Retrospective Studies , Survival Rate
15.
Redox Biol ; 13: 581-587, 2017 10.
Article in English | MEDLINE | ID: mdl-28783588

ABSTRACT

Oxysterols are bioactive lipids that act as regulators of lipid metabolism, inflammation, cell viability and are involved in several diseases, including atherosclerosis. Mounting evidence linked the atherosclerosis to endothelium dysfunction; in fact, the endothelium regulates the vascular system with roles in processes such as hemostasis, cell cholesterol, hormone trafficking, signal transduction and inflammation. Several papers shed light the ability of oxysterols to induce apoptosis in different cell lines including endothelial cells. Apoptotic endothelial cell and endothelial denudation may constitute a critical step in the transition to plaque erosion and vessel thrombosis, so preventing the endothelial damaged has garnered considerable attention as a novel means of treating atherosclerosis. Endoplasmic reticulum (ER) is the site where the proteins are synthetized and folded and is necessary for most cellular activity; perturbations of ER homeostasis leads to a condition known as endoplasmic reticulum stress. This condition evokes the unfolded protein response (UPR) an adaptive pathway that aims to restore ER homeostasis. Mounting evidence suggests that chronic activation of UPR leads to cell dysfunction and death and recently has been implicated in pathogenesis of endothelial dysfunction. Autophagy is an essential catabolic mechanism that delivers misfolded proteins and damaged organelles to the lysosome for degradation, maintaining basal levels of autophagic activity it is critical for cell survival. Several evidence suggests that persistent ER stress often results in stimulation of autophagic activities, likely as a compensatory mechanism to relieve ER stress and consequently cell death. In this review, we summarize evidence for the effect of oxysterols on endothelial cells, especially focusing on oxysterols-mediated induction of endoplasmic reticulum stress.


Subject(s)
Endoplasmic Reticulum Stress , Endothelial Cells/metabolism , Endothelium, Vascular/metabolism , Oxysterols/metabolism , Animals , Apoptosis , Autophagy , Endothelium, Vascular/cytology , Humans , Unfolded Protein Response
16.
Pharmacogenomics J ; 17(3): 258-264, 2017 06.
Article in English | MEDLINE | ID: mdl-26927284

ABSTRACT

Production of lactate even in the presence of sufficient levels of oxygen (aerobic glycolysis) seems the prevalent energy metabolism pathway in cancer cells. The analysis of altered expression of effectors causing redirection of glucose metabolism would help to characterize this phenomenon with possible therapeutic implications. We analyzed mRNA expression of the key enzymes involved in aerobic glycolysis in normal mucosa (NM), primary tumor (PT) and liver metastasis (LM) of colorectal cancer (CRC) patients (pts) who underwent primary tumor surgery and liver metastasectomy. Tissues of 48 CRC pts were analyzed by RT-qPCR for mRNA expression of the following genes: hexokinase-1 (HK-1) and 2 (HK-2), embryonic pyruvate kinase (PKM-2), lactate dehydrogenase-A (LDH-A), glucose transporter-1 (GLUT-1), voltage-dependent anion-selective channel protein-1 (VDAC-1). Differences in the expression of the candidate genes between tissues and associations with clinical/pathologic features were studied. GLUT-1, LDH-A, HK-1, PKM-2 and VDAC-1 mRNA expression levels were significantly higher in PT/LM tissues compared with NM. There was a trend for higher expression of these genes in LM compared with PT tissues, but differences were statistically significant for LDH-A expression only. RAS mutation-positive disease was associated with high GLUT-1 mRNA expression levels only. Right-sided colon tumors showed significantly higher GLUT-1, PKM-2 and LDH-A mRNA expression levels. High glycolytic profile was significantly associated with poor prognosis in 20 metastatic, RAS-mutated pts treated with first-line chemotherapy plus Bevacizumab. Altered expression of effectors associated with upregulated glucose uptake and aerobic glycolysis occurs in CRC tissues. Additional analyses are warranted for addressing the role of these changes in anti-angiogenic resistance and for developing novel therapeutics.


Subject(s)
Biomarkers, Tumor/genetics , Colorectal Neoplasms/genetics , Glycolysis/genetics , Liver Neoplasms/genetics , Aged , Angiogenesis Inhibitors/therapeutic use , Antineoplastic Combined Chemotherapy Protocols/therapeutic use , Colectomy , Colorectal Neoplasms/enzymology , Colorectal Neoplasms/pathology , Colorectal Neoplasms/therapy , Disease Progression , Drug Resistance, Neoplasm/genetics , Female , Gene Expression Profiling , Gene Expression Regulation, Enzymologic , Gene Expression Regulation, Neoplastic , Genetic Predisposition to Disease , Hepatectomy , Humans , Italy , Kaplan-Meier Estimate , Liver Neoplasms/enzymology , Liver Neoplasms/secondary , Liver Neoplasms/therapy , Male , Metastasectomy/methods , Mutation , Pharmacogenetics , Pharmacogenomic Variants , Phenotype , RNA, Messenger/genetics , Retrospective Studies , Risk Factors , Time Factors , Treatment Outcome
17.
Phys Rev E ; 94(2-1): 022209, 2016 Aug.
Article in English | MEDLINE | ID: mdl-27627300

ABSTRACT

The relation between the onset of chaos and critical phenomena, like quantum phase transitions (QPTs) and excited-state quantum phase transitions (ESQPTs), is analyzed for atom-field systems. While it has been speculated that the onset of hard chaos is associated with ESQPTs based in the resonant case, the off-resonant cases, and a close look at the vicinity of the QPTs in resonance, show clearly that both phenomena, ESQPTs and chaos, respond to different mechanisms. The results are supported in a detailed numerical study of the dynamics of the semiclassical Hamiltonian of the Dicke model. The appearance of chaos is quantified calculating the largest Lyapunov exponent for a wide sample of initial conditions in the whole available phase space for a given energy. The percentage of the available phase space with chaotic trajectories is evaluated as a function of energy and coupling between the qubit and bosonic part, allowing us to obtain maps in the space of coupling and energy, where ergodic properties are observed in the model. Different sets of Hamiltonian parameters are considered, including resonant and off-resonant cases.

18.
Phys Rev E ; 93(2): 022215, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26986339

ABSTRACT

Employing efficient diagonalization techniques, we perform a detailed quantitative study of the regular and chaotic regions in phase space in the simplest nonintegrable atom-field system, the Dicke model. A close correlation between the classical Lyapunov exponents and the quantum Participation Ratio of coherent states on the eigenenergy basis is exhibited for different points in the phase space. It is also shown that the Participation Ratio scales linearly with the number of atoms in chaotic regions and with its square root in the regular ones.

19.
Nat Commun ; 6: 6728, 2015 Apr 21.
Article in English | MEDLINE | ID: mdl-25898170

ABSTRACT

In November 2013, a series of earthquakes began along a mapped ancient fault system near Azle, Texas. Here we assess whether it is plausible that human activity caused these earthquakes. Analysis of both lake and groundwater variations near Azle shows that no significant stress changes were associated with the shallow water table before or during the earthquake sequence. In contrast, pore-pressure models demonstrate that a combination of brine production and wastewater injection near the fault generated subsurface pressures sufficient to induce earthquakes on near-critically stressed faults. On the basis of modelling results and the absence of historical earthquakes near Azle, brine production combined with wastewater disposal represent the most likely cause of recent seismicity near Azle. For assessing the earthquake cause, our research underscores the necessity of monitoring subsurface wastewater formation pressures and monitoring earthquakes having magnitudes of ∼M2 and greater. Currently, monitoring at these levels is not standard across Texas or the United States.

20.
Pharmacogenomics J ; 14(5): 418-23, 2014 Oct.
Article in English | MEDLINE | ID: mdl-24663077

ABSTRACT

In gastric cancer, available clinical studies focusing on the activated hepatocyte growth factor (HGF)/MET pathway are limited to surgical and often heterogeneous series. MET copy number gain (CNG) and an activating truncation in the HGF promoter (deoxyadenosine tract element, DATE+) were studied in tumors of 95 patients with advanced gastric cancer treated with palliative chemotherapy. Associations with overall survival (OS) and the pattern of metastatic disease were studied. Median OS was 9.7 months in 80 MET CNG <5 copies cases (MET-), and 6.4 months in 15 MET CNG was ⩾5 copies cases (MET+) (P=0.001). MET+ status confirmed the adverse prognostic effect in the multivariate model. A significantly different distribution of MET+/DATE+ and MET-/DATE- cases was observed between patients with and without peritoneal carcinomatosis (PC). MET+ status confirms its adverse prognostic role in advanced gastric cancer patients. The activated MET/HGF axis seems to be associated with PC. These findings are relevant to the development of anti-MET/HGF compounds.


Subject(s)
Antineoplastic Combined Chemotherapy Protocols/therapeutic use , Hepatocyte Growth Factor/metabolism , Palliative Care , Proto-Oncogene Proteins c-met/metabolism , Stomach Neoplasms/drug therapy , Stomach Neoplasms/metabolism , Aged , Female , Hepatocyte Growth Factor/genetics , Humans , Male , Proto-Oncogene Proteins c-met/genetics , Retrospective Studies , Stomach Neoplasms/genetics , Survival Rate
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