Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 6 de 6
Filter
Add more filters










Publication year range
1.
J Surg Res ; 199(2): 688-97, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26092214

ABSTRACT

BACKGROUND: Several scar-scoring scales exist to clinically monitor burn scar development and maturation. Although scoring scars through direct clinical examination is ideal, scars must sometimes be scored from photographs. No scar scale currently exists for the latter purpose. MATERIALS AND METHODS: We modified a previously described scar scale (Yeong et al., J Burn Care Rehabil 1997) and tested the reliability of this new scale in assessing burn scars from photographs. The new scale consisted of three parameters as follows: scar height, surface appearance, and color mismatch. Each parameter was assigned a score of 1 (best) to 4 (worst), generating a total score of 3-12. Five physicians with burns training scored 120 representative photographs using the original and modified scales. Reliability was analyzed using coefficient of agreement, Cronbach alpha, intraclass correlation coefficient, variance, and coefficient of variance. Analysis of variance was performed using the Kruskal-Wallis test. Color mismatch and scar height scores were validated by analyzing actual height and color differences. RESULTS: The intraclass correlation coefficient, the coefficient of agreement, and Cronbach alpha were higher for the modified scale than those of the original scale. The original scale produced more variance than that in the modified scale. Subanalysis demonstrated that, for all categories, the modified scale had greater correlation and reliability than the original scale. The correlation between color mismatch scores and actual color differences was 0.84 and between scar height scores and actual height was 0.81. CONCLUSIONS: The modified scar scale is a simple, reliable, and useful scale for evaluating photographs of burn patients.


Subject(s)
Burns/pathology , Cicatrix/pathology , Severity of Illness Index , Skin/pathology , Humans , Photography , Research Design
2.
J Biol Chem ; 279(45): 47177-83, 2004 Nov 05.
Article in English | MEDLINE | ID: mdl-15317816

ABSTRACT

Flavodoxins are well known one-domain alpha/beta electron-transfer proteins that, according to the presence or absence of a approximately 20-residue loop splitting the fifth beta-strand of the central beta-sheet, have been classified in two groups: long and short-chain flavodoxins, respectively. Although the flavodoxins have been extensively used as models to study electron transfer, ligand binding, protein stability and folding issues, the role of the loop has not been investigated. We have constructed two shortened versions of the long-chain Anabaena flavodoxin in which the split beta-strand has been spliced to remove the original loop. The two variants have been carefully analyzed using various spectroscopic and hydrodynamic criteria, and one of them is clearly well folded, indicating that the long loop is a peripheral element of the structure of long flavodoxins. However, the removal of the loop (which is not in contact with the cofactor in the native structure) markedly decreases the affinity of the apoflavodoxin-FMN complex. This seems related to the fact that, in long flavodoxins, the adjacent tyrosine-bearing FMN binding loop (which is longer and thus more flexible than in short flavodoxins) is stabilized in its competent conformation by interactions with the excised loop. The modest role played by the long loop of long flavodoxins in the structure of these proteins (and in its conformational stability, see Lopez-Llano, J., Maldonado, S., Jain, S., Lostao, A., Godoy-Ruiz, R., Sanchez-Ruiz, Cortijo, M., Fernandez-Recio, J., and Sancho, J. (2004) J. Biol. Chem. 279, 47184-47191) opens the possibility that its conservation in so many species is related to a functional role yet to be discovered. In this respect, we discuss the possibility that the long loop is involved in the recognition of some flavodoxin partners. In addition, we report on a structural feature of flavodoxins that could indicate that the short flavodoxins derive from the long ones.


Subject(s)
Apoproteins/chemistry , Flavodoxin/chemistry , Anabaena/metabolism , Anisotropy , Circular Dichroism , Cloning, Molecular , Electrons , Ligands , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Weight , Mutagenesis, Site-Directed , Phosphates/pharmacology , Plasmids/metabolism , Protein Binding , Protein Conformation , Protein Structure, Secondary , Protein Structure, Tertiary , Spectrometry, Fluorescence , Spectrophotometry , Time Factors
3.
J Biol Chem ; 279(45): 47184-91, 2004 Nov 05.
Article in English | MEDLINE | ID: mdl-15317817

ABSTRACT

Flavodoxins are classified in two groups according to the presence or absence of a approximately 20-residue loop of unknown function. In the accompanying paper (36), we have shown that the differentiating loop from the long-chain Anabaena PCC 7119 flavodoxin is a peripheral structural element that can be removed without preventing the proper folding of the apoprotein. Here we investigate the role played by the loop in the stability and folding mechanism of flavodoxin by comparing the equilibrium and kinetic behavior of the full-length protein with that of loop-lacking, shortened variants. We show that, when the loop is removed, the three-state equilibrium thermal unfolding of apoflavodoxin becomes two-state. Thus, the loop is responsible for the complexity shown by long-chain apoflavodoxins toward thermal denaturation. As for the folding reaction, both shortened and wild type apoflavodoxins display three-state behavior but their folding mechanisms clearly differ. Whereas the full-length protein populates an essentially off-pathway transient intermediate, the additional state observed in the folding of the shortened variant analyzed seems to be simply an alternative native conformation. This finding suggests that the long loop may also be responsible for the accumulation of the kinetic intermediate observed in the full-length protein. Most revealing, however, is that the influence of the loop on the overall conformational stability of apoflavodoxin is quite low and the natively folded shortened variant Delta(120-139) is almost as stable as the wild type protein. The fact that the loop, which is not required for a proper folding of the polypeptide, does not even play a significant role in increasing the conformational stability of the protein supports our proposal (36) that the differentiating loop of long-chain flavodoxins may be related to a recognition function, rather than serving a structural purpose.


Subject(s)
Apoproteins/chemistry , Flavodoxin/chemistry , Anabaena/metabolism , Anisotropy , Calorimetry, Differential Scanning , Circular Dichroism , Dose-Response Relationship, Drug , Hot Temperature , Hydrogen-Ion Concentration , Kinetics , Magnetic Resonance Spectroscopy , Models, Chemical , Molecular Weight , Mutagenesis, Site-Directed , Phosphates/pharmacology , Plasmids/metabolism , Protein Conformation , Protein Denaturation , Protein Folding , Protein Structure, Secondary , Protein Structure, Tertiary , Spectrometry, Fluorescence , Temperature , Thermodynamics , Time Factors , Urea/pharmacology
4.
Protein Sci ; 11(5): 1260-73, 2002 May.
Article in English | MEDLINE | ID: mdl-11967382

ABSTRACT

Electrostatic contributions to the conformational stability of apoflavodoxin were studied by measurement of the proton and salt-linked stability of this highly acidic protein with urea and temperature denaturation. Structure-based calculations of electrostatic Gibbs free energy were performed in parallel over a range of pH values and salt concentrations with an empirical continuum method. The stability of apoflavodoxin was higher near the isoelectric point (pH 4) than at neutral pH. This behavior was captured quantitatively by the structure-based calculations. In addition, the calculations showed that increasing salt concentration in the range of 0 to 500 mM stabilized the protein, which was confirmed experimentally. The effects of salts on stability were strongly dependent on cationic species: K(+), Na(+), Ca(2+), and Mg(2+) exerted similar effects, much different from the effect measured in the presence of the bulky choline cation. Thus cations bind weakly to the negatively charged surface of apoflavodoxin. The similar magnitude of the effects exerted by different cations indicates that their hydration shells are not disrupted significantly by interactions with the protein. Site-directed mutagenesis of selected residues and the analysis of truncation variants indicate that cation binding is not site-specific and that the cation-binding regions are located in the central region of the protein sequence. Three-state analysis of the thermal denaturation indicates that the equilibrium intermediate populated during thermal unfolding is competent to bind cations. The unusual increase in the stability of apoflavodoxin at neutral pH affected by salts is likely to be a common property among highly acidic proteins.


Subject(s)
Apoproteins/chemistry , Flavodoxin/chemistry , Protein Conformation , Binding Sites , Cations , Chlorides/chemistry , Choline/chemistry , Circular Dichroism , Hydrogen-Ion Concentration , Mutagenesis, Site-Directed , Osmolar Concentration , Temperature
5.
Rev. cuba. med. trop ; 45(3): 177-9, sept.-dic. 1993. tab
Article in Spanish | LILACS | ID: lil-158476

ABSTRACT

Se realizó un estudio para evaluar 6 especies de algas cianofitas de la familia Nostocaceae (4 especies del género Nostoc y 2 especies del género Anabaena), como alimento de juveniles de Biomphalaria havanensis hospedero potencial de esquistosomiasis. Para ello se tomaron 180 moluscos de 2 a 3,6 mm de diámetro de la concha y se colocaron en placas de Petri donde se evaluó la mortalidad y el crecimiento. Se gún los resultados obtenidos la cepa 6/88 del género Nostoc satisface los requerimientos de los juveniles de B. havanensis, aunque la 7/86 del género Anabaena también puede utilizarse para la cría de estos moluscos en condiciones controladas


Subject(s)
Animals , Animal Feed , Biomphalaria , Pest Control, Biological/methods , Eukaryota , In Vitro Techniques
6.
Rev. cuba. med. trop ; 45(3): 177-79, sep.- dic. 1993. tab
Article in Spanish | CUMED | ID: cum-5610

ABSTRACT

Se realizó un estudio para evaluar 6 especies de algas cianofitas de la familia Nostocaceae (4 especies del género Nostoc y 2 especies del género Anabaena), como alimento de juveniles de Biomphalaria havanensis hospedero potencial de esquistosomiasis. Para ello se tomaron 180 moluscos de 2 a 3,6 mm de diámetro de la concha y se colocaron en placas de Petri donde se evaluó la mortalidad y el crecimiento. Se gún los resultados obtenidos la cepa 6/88 del género Nostoc satisface los requerimientos de los juveniles de B. havanensis, aunque la 7/86 del género Anabaena también puede utilizarse para la cría de estos moluscos en condiciones controladas


Subject(s)
Animals , In Vitro Techniques , Eukaryota , Cyanobacteria , Animal Feed , Biomphalaria , Pest Control, Biological/methods
SELECTION OF CITATIONS
SEARCH DETAIL
...