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1.
J Proteomics ; 73(5): 992-1003, 2010 Mar 10.
Article in English | MEDLINE | ID: mdl-20045494

ABSTRACT

Human embryonic stem cells (hESC) underlie embryogenesis but paracrine signals associated with the process are unknown. This study was designed to 1) profile native proteins secreted by undifferentiated hESC and 2) determine their biological effects on primary neonatal cardiomyocytes. We utilized multi-analyte, immunochemical assays to characterize media conditioned by undifferentiated hESC versus unconditioned media. Expression profiling was performed on cardiomyocytes subjected to these different media conditions and altered transcripts were mapped to critical pathways. Thirty-two of 109 proteins were significantly elevated in conditioned media ranging in concentration from thrombospondin (57.2+/-5.0 ng/ml) to nerve growth factor (7.4+/-1.2pg/ml) and comprising chemokines, cytokines, growth factors, and proteins involved in cell adhesion and extracellular matrix remodeling. Conditioned media induced karyokinesis, cytokinesis and proliferation in mono- and binucleate cardiomyocytes. Pathway analysis revealed comprehensive activation of the ROCK 1 and 2 G-protein coupled receptor (GPCR) pathway associated with cytokinesis, and the RAS/RAF/MEK/ERK receptor tyrosine kinase (RTK) and JAK/STAT-cytokine pathway involved in cell cycle progression. These results provide a partial database of proteins secreted by pluripotent hESC that potentiate cell division in cardiomyocytes via a paracrine mechanism suggesting a potential role for these stem cell factors in cardiogenesis and cardiac repair.


Subject(s)
Embryonic Stem Cells/metabolism , Myocytes, Cardiac/chemistry , Paracrine Communication , Proteins/pharmacology , Cell Cycle/drug effects , Cell Cycle/genetics , Cell Division/drug effects , Cell Division/genetics , Culture Media, Conditioned/chemistry , Embryonic Development , Embryonic Stem Cells/chemistry , Gene Expression Profiling , Humans , Ligands , Myocytes, Cardiac/drug effects , Myocytes, Cardiac/metabolism , Proteins/analysis , Proteins/metabolism , RNA, Messenger/analysis , Signal Transduction/genetics
2.
Plant Physiol ; 106(4): 1471-81, 1994 Dec.
Article in English | MEDLINE | ID: mdl-7846159

ABSTRACT

A cDNA clone encoding a basic thaumatin-like protein of Zea mays was recovered from a mid-development seed cDNA library. The gene, Zlp, encoded a protein that was nearly identical with maize zeamatin and alpha-amylase/trypsin inhibitor. Expression of Zlp mRNA was highest in the endosperm tissue of seed 4 weeks after pollination. Expression of zeamatin-like (ZLP) protein correlated with mRNA; also, a low basal level of ZLP expression in leaf was not appreciably induced by abiotic stresses. ZLP was expressed with its own signal peptide in insect cells and in transgenic Arabidopsis and tomato plants. ZLP was secreted in all three systems, with correct processing of the signal peptide. ZLP expressed in transgenic tomato was found to be partially subjected to a proteolytic cleavage after residue 180, by an unknown mechanism, to give a "nicked" isoform of ZLP. Purified ZLP from all three sources, as well as purified "nicked" ZLP from tomato, demonstrated fungal inhibition against Candida albicans and Trichoderma reesei, with marginal inhibition observed against Alternaria solani and Neurospora crassa.


Subject(s)
Antifungal Agents , Gene Expression , Genes, Plant , Plant Proteins/biosynthesis , Plant Proteins/genetics , Trypsin Inhibitors , Zea mays/genetics , Zea mays/metabolism , Amino Acid Sequence , Antifungal Agents/pharmacology , Base Sequence , Blotting, Southern , Blotting, Western , DNA Primers , Gene Library , Microbial Sensitivity Tests , Molecular Sequence Data , Neurospora crassa/drug effects , Plant Proteins/pharmacology , Plants, Genetically Modified , RNA, Messenger/analysis , RNA, Messenger/biosynthesis , Restriction Mapping , Sequence Homology, Amino Acid , Transcription, Genetic
3.
Plant Mol Biol ; 22(2): 347-60, 1993 May.
Article in English | MEDLINE | ID: mdl-8507835

ABSTRACT

A barley acidic beta-1,3-glucanase gene was recovered from a barley genomic library by homology with a partial cDNA of barley basic beta-1,3-glucanase isoenzyme GII. The gene, Abg2, is homologous to the PR2 family of pathogenesis-related beta-1,3-glucanase genes. The ABG2 protein has 81% amino acid similarity to barley basic beta-1,3-glucanase GII. The ABG2 protein is encoded as a preprotein of 336 amino acids including a 28 amino acid signal peptide. A 299 bp intron occurs within codon 25. The mature ABG2 protein has a predicted mass of 32,642 Da and a calculated isoelectric point of 4.9. The second exon of the Abg2 gene shows a strong preference for G + C in the third position of degenerate codons. The Abg2 gene was functionally expressed in Escherichia coli. Abg2 mRNA is constitutively expressed in barley root; leaf expression of Abg2 mRNA is induced by mercuric chloride and infection by Erysiphe graminis f. sp. hordei. Southern blot analysis indicates that Abg2 is a member of a small gene family.


Subject(s)
Genes, Plant/genetics , Glucan Endo-1,3-beta-D-Glucosidase/genetics , Hordeum/genetics , Plant Proteins/genetics , Acids , Amino Acid Sequence , Base Sequence , Cloning, Molecular , Escherichia coli/genetics , Gene Expression , Genome , Glucan Endo-1,3-beta-D-Glucosidase/biosynthesis , Hordeum/enzymology , Hordeum/growth & development , Molecular Sequence Data , RNA, Messenger/genetics , Recombinant Proteins/biosynthesis , Restriction Mapping , Seeds/enzymology , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Tissue Distribution
4.
J Bacteriol ; 172(8): 4510-21, 1990 Aug.
Article in English | MEDLINE | ID: mdl-2198263

ABSTRACT

The Saccharomyces cerevisiae SEC14 gene encodes a cytosolic factor that is required for secretory protein movement from the Golgi complex. That some conservation of SEC14p function may exist was initially suggested by experiments that revealed immunoreactive polypeptides in cell extracts of the divergent yeasts Kluyveromyces lactis and Schizosaccharomyces pombe. We have cloned and characterized the K. lactis SEC14 gene (SEC14KL). Immunoprecipitation experiments indicated that SEC14KL encoded the K. lactis structural homolog of SEC14p. In agreement with those results, nucleotide sequence analysis of SEC14KL revealed a gene product of 301 residues (Mr, 34,615) and 77% identity to SEC14p. Moreover, a single ectopic copy of SEC14KL was sufficient to render S. cerevisiae sec14-1(Ts) mutants, or otherwise inviable sec14-129::HIS3 mutant strains, completely proficient for secretory pathway function by the criteria of growth, invertase secretion, and kinetics of vacuolar protein localization. This efficient complementation of sec14-129::HIS3 was observed to occur when the rates of SEC14pKL and SEC14p synthesis were reduced by a factor of 7 to 10 with respect to the wild-type rate of SEC14p synthesis. Taken together, these data provide evidence that the high level of structural conservation between SEC14p and SEC14pKL reflects a functional identity between these polypeptides as well. On the basis of the SEC14p and SEC14pKL primary sequence homology to the human retinaldehyde-binding protein, we suggest that the general function of these SEC14p species may be to regulate the delivery of a hydrophobic ligand to Golgi membranes so that biosynthetic secretory traffic can be supported.


Subject(s)
Carrier Proteins/genetics , Fungal Proteins/genetics , Genes, Fungal , Golgi Apparatus/metabolism , Kluyveromyces/genetics , Membrane Proteins , Saccharomyces cerevisiae Proteins , Saccharomyces cerevisiae/metabolism , Saccharomycetales/genetics , Schizosaccharomyces pombe Proteins , Amino Acid Sequence , Base Sequence , Carrier Proteins/metabolism , Chromosome Deletion , Cloning, Molecular , DNA, Fungal/genetics , DNA, Fungal/isolation & purification , Escherichia coli/genetics , Fungal Proteins/metabolism , Genotype , Glycoside Hydrolases/metabolism , Molecular Sequence Data , Phospholipid Transfer Proteins , Restriction Mapping , Sequence Homology, Nucleic Acid , beta-Fructofuranosidase
5.
J Cell Biol ; 108(4): 1271-81, 1989 Apr.
Article in English | MEDLINE | ID: mdl-2466847

ABSTRACT

We have obtained and characterized a genomic clone of SEC14, a Saccharomyces cerevisiae gene whose product is required for export of yeast secretory proteins from the Golgi complex. Gene disruption experiments indicated that SEC14 is an essential gene for yeast vegetative growth. Nucleotide sequence analysis revealed the presence of an intron within the SEC14 structural gene, and predicted the synthesis of a hydrophilic polypeptide of 35 kD in molecular mass. In confirmation, immunoprecipitation experiments demonstrated SEC14p to be an unglycosylated polypeptide, with an apparent molecular mass of some 37 kD, that behaved predominantly as a cytosolic protein in subcellular fractionation experiments. These data were consistent with the notion that SEC14p is a cytosolic factor that promotes protein export from yeast Golgi. Additional radiolabeling experiments also revealed the presence of SEC14p-related polypeptides in extracts prepared from the yeasts Kluyveromyces lactis and Schizosaccharomyces pombe. Furthermore, the K. lactis SEC14p was able to functionally complement S. cerevisiae sec14ts defects. These data suggested a degree of conservation of SEC14p structure and function in these yeasts species.


Subject(s)
Fungal Proteins/genetics , Genes, Fungal , Glycoside Hydrolases/genetics , Golgi Apparatus/metabolism , Protein Processing, Post-Translational , Saccharomyces cerevisiae/genetics , Amino Acid Sequence , Base Sequence , Cloning, Molecular , Epitopes/analysis , Escherichia coli/genetics , Fungal Proteins/immunology , Molecular Sequence Data , Protein Conformation , Restriction Mapping , Saccharomyces cerevisiae/metabolism , Sequence Homology, Nucleic Acid , beta-Fructofuranosidase
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