Genome-centric polyhydroxyalkanoate reconciliation reveals nutrient enriched growth dependent biosynthesis in Bacillus cereus IBA1.

Microbiological polyhydroxyalkanoates (PHAs) are rooted as the most promising bio-replacements of synthetic polymers. Inherent properties of these PHAs further expand their applicability in numerous industrial, environmental, and clinical sectors. To propel these, a new environmental, endotoxin free gram-positive bacterium i.e., Bacillus cereus IBA1 was identified to harbor advantageous PHA producer characteristics through high-throughput omics mining approaches. Unlike traditional fermentations, nutrient enriched strategy was used to enhance PHA granular concentrations by ∼2.3 folds to 2.78 ± 0.19 g/L. Additionally, this study is the first to confirm an underlying growth dependent PHA biogenesis through exploring PHA granule associated operons which harbour constitutively expressing PHA synthase (phaC) coupled with differentially expressing PHA synthase subunit (phaR) and regulatory protein (phaP, phaQ) amid different growth phases. Moreover, the feasibility of this promising microbial phenomenon could propel next-generation biopolymers, and increase industrial applicability of PHAs, thereby significantly contributing to the sustainable development.

Evaluation of the impact of continuous Kangaroo Mother Care (KMC) initiated immediately after birth compared to KMC initiated after stabilization in newborns with birth weight 1.0 to < 1.8 kg on neurodevelopmental outcomes: Protocol for a follow-up study.

BACKGROUND: Preterm birth or low birth weight is the single largest cause of death in newborns, however this mortality can be reduced through newborn care interventions, including Kangaroo Mother Care (KMC). Previously, a multi-country randomized controlled trial, coordinated by the World Health Organization (WHO), reported a significant survival advantage with initiation of continuous KMC immediately after birth compared with initiation of continuous KMC a few days after birth when the baby is considered clinically stable. Whether the survival advantage would lead to higher rates of neurodevelopmental morbidities, or the immediate KMC will also have a beneficial effect on cognitive development also, has not been investigated. We therefore propose to test the hypothesis that low-birth-weight infants exposed to immediate KMC will have lower rates of neurodevelopmental impairment in comparison to traditional KMC-treated infants, by prospectively following up infants already enrolled in the immediate KMC trial for the first 2 years of life, and assessing their growth and neurodevelopment. METHODS: This prospective cohort study will enroll surviving neonates from the main WHO immediate KMC trial. The main trial as well as this follow-up study are being conducted in five low- and middle-income countries in South Asia and sub-Saharan Africa. The estimated sample size for comparison of the risk of neurodevelopmental impairment is a total of 2200 children. The primary outcome will include rates of cerebral palsy, hearing impairment, vision impairment, mental and motor development, and epilepsy and will be assessed by the age of 3 years. The analysis will be by intention to treat. DISCUSSION: Immediate KMC can potentially reduce low-birth-weight-associated complications such as respiratory disease, hypothermia, hypoglycemia, and infection that can result in impaired neurocognitive development. Neuroprotection may also be mediated by improved physiological stabilization that may lead to better maturation of neural pathways, reduced risk of hypoxia, positive parental impact, improved sleep cycles, and improved stress responses. The present study will help in evaluating the overall impact of KMC by investigating the long-term effect on neurodevelopmental impairment in the survivors. TRIAL REGISTRATION: Clinical Trials Registry-India CTRI/2019/11/021899. Registered on 06 November 2019. Trials registration of parent trial: ACTRN12618001880235; Clinical Trials Registry-India: CTRI/2018/08/015369.

A review on mechanistic understanding of microplastic pollution on the performance of anaerobic digestion.

Anaerobic digestion (AD) has emerged as a promising technology for diverting the organic waste from the landfills along with the production of clean energy. AD is a microbial-driven biochemical process wherein the plethora of microbial communities participate in converting the putrescible organic matter into biogas. Nevertheless, the AD process is susceptible to the external environmental factors such as presence of physical (microplastics) and chemical (antibiotics, pesticides) pollutants. The microplastics (MPs) pollution has received recent attention due to the increasing plastic pollution in terrestrial ecosystems. This review was aimed for holistic assessment of impact of MPs pollution on AD process to develop efficient treatment technology. First, the possible pathways of MPs entry into the AD systems were critically evaluated. Further, the recent literature on the experimental studies pertaining to the impact of different types of MPs at different concentrations on the AD process was reviewed. In addition, several mechanisms such as direct exposure of MPs on the microbial cells, indirect impact of MPs through the leaching of toxic chemicals and reactive oxygen species (ROS) formation on AD process were elucidated. Besides, the risk possessed by the increase of antibiotic resistance genes (ARGs) after the AD process due to the MPs stress on microbial communities were discussed. Overall, this review deciphered the severity of MPs pollution on AD process at different levels.

Influence of inoculum-to-substrate ratio on biogas enhancement during biochar-assisted co-digestion of food waste and sludge.

High accumulation of volatile fatty acids (VFAs) is one of the major concerns during mesophilic anaerobic co-digestion of food waste (FW) and sewage sludge (SS). Therefore, improving the stability of the anaerobic digestion process could surpass quick acidification while accelerating methanogenesis. In this study, the suitability of biochar-assisted co-digestion was evaluated at different inoculum and substrate ratios (I/S ratios: 0.1, 0.3, 0.6, and 0.9). The maximum methane yield of 256.85 mL/gVSadd was observed at an I/S ratio of 0.6. The results indicated fast volatile solid removal (∼ 47.17% to 73%) and a critical role of biochar addition in alleviating the underlying inhibitions. Substantial changes in the microbial community composition including Methanosata, Methanobrevibacter, and Methanosarcina were also observed which predominated and stabilised the methanogenesis process at higher I/S ratios. These results emphasised that the anaerobic co-digestion of FW/sludge is a promising approach, wherein the biochar amendment at different I/S ratios should be well maintained to avoid inhibitions from excess microbial VFA acidification of organic waste feedstocks.

Effect of different-sized bulking agents on nitrification process during food waste digestate composting.

Food waste digestate (FWD) disposal is a serious bottleneck in anaerobic digestion plants to achieve a circular bioeconomy. FWD could be recycled into nitrogen-rich compost; however, the co-composting process optimisation along with bulking agents is required to reduce nitrogen loss and unwanted gaseous emissions. In the present study, two different-sized bulking agents, namely, wood shaving (WS) and fine sawdust (FS), were used to investigate their impact on FWD composting performance along with the nitrogen dynamics. The mixing of FWD with different bulking agents altered the physiochemical characteristics of composting matrix and the effective composting performance was observed through reduced ammonium nitrogen and increased seed germination index during 28 days of composting. The carbon loss of 19-22% through CO2 emission indicated similar carbon mineralisation with both types of sawdust; however, the nitrogen transformation pathways were different. Only WS treatment demonstrated the nitrification process, whereas the nitrogen loss was higher with FS. A total nitrogen loss of ∼15% was observed in treatments with FS, whereas WS treatments displayed a nitrogen loss of 12%. The outcome of the present study could significantly contribute to the practical aspect of the FWD composting operation with the promotion of the bio-recycling economy.

Role of tobacco and bamboo biochar on food waste digestate co-composting: Nitrogen conservation, greenhouse gas emissions, and compost quality.

Anaerobic digestion is considered an environmentally benign process for the recycling of food waste into biogas. However, unscientific disposal of ammonium-rich food waste digestate (FWD), a by-product of anaerobic digestion induces environmental issues such as odor nuisances, water pollution, phytotoxicity and pathogen transformations in soil, etc. In the present study, FWD produced from anaerobic digestion of source-separated food waste from markets and industries was used for converting FWD into biofertilizer using 20-L bench scale composters. The issues of nitrogen loss, NH3 volatilization, and greenhouse gas N2O emission were addressed using in-situ composting technologies with the aid of tobacco and bamboo biochar produced at pyrolytic temperatures of 450 °C and 600 °C, respectively. The results demonstrated that the phytotoxic nature of FWD could be reduced into a nutrient-rich compost by mitigating nitrogen loss by 29-53% using 10% tobacco and 10% bamboo biochar in comparison with the control treatment. Tobacco biochar mitigates NH3 emission by 63% but enhances the N2O emission by 65%, whereas bamboo biochar mitigates both NH3 and N2O emissions by 48% and 31%, respectively. Overall, 10% tobacco and 10% bamboo biochar amendment could reduce total nitrogen loss by 29% and 53%, respectively. Furthermore, the biochar addition significantly enhanced the biodegradation rate of FWD and the mature compost could be produced within 21 days of FWD composting as seen by an increased seed germination index (>50% on dry weight basis). The results of this study could be beneficial in developing a circular bioeconomy locally with the waste-derived substrates.

Effect of Chinese medicinal herbal residues compost on tomato and Chinese cabbage plants: Assessment on phytopathogenic effect and nutrients uptake.

Chinese medicinal herbal residues (CMHRs) are known for their antipathogenic properties due to the presence of bioactive compounds. Hence, CMHRs could be used as a potential resource to produce biofertilizer with antipathogenic properties for agricultural applications. In this study, a novel approach was used by utilizing the waste-derived biofertilizer, i.e., CMHRs compost (CMHRC) as a nutrient supplier as well as an organic bioagent against Alternaria solani (A. solani) and Fusarium oxysporum (F. oxysporum) on tomato (Lycopersicon esculentum) and Chinese cabbage (Brassica rapa subsp. Chinensis) plants. The experiments were conducted under greenhouse conditions using locally collected acidic soil wherein 2%, 5% and 10% CMHRC (dry weight) along with 5% food waste compost were used as treatments. In addition, only soil and soil with phytopathogens were used as control treatments. The results suggested that amending the compost into acidic soil significantly increased the pH to a neutral level along with enhanced uptake of nutrients. Among all the treatments, 5% CMHRs compost addition increased the tomato plant biomass production to 4.9 g/pot (dry weight) compared to 2.2 g/pot in control. A similar trend was observed in Chinese cabbage plants and the improved plant biomass production could be attributed to the combined effect of strong nutrient absorption ability by healthy roots and enhanced nutrient supply. At 5% CMHRC application rate, the nitrogen uptake by tomato and Chinese cabbage plants increased by 78% and 62%, respectively, whereas phosphorous uptake increased by 75% and 25%, respectively. The reduction in A. solani by 48% and F. oxysporum by 54% in the post-harvested soil of 5% CMHRC treatment against the control demonstrated the anti-phytopathogenic efficiency of CMHRC compost. Hence, the present study illustrates the beneficiary aspects of utilizing CMHRs to produce biofertilizer with anti-phytopathogenic properties which can be safely used for tomato and Chinese cabbage plant growth.

Impact of total solids content on biochar amended co-digestion of food waste and sludge: Microbial community dynamics, methane production and digestate quality assessment.

This study evaluates the impact of biochar addition on the performance of anaerobic co-digestion of food waste (FW) and sewage sludge at different total solids (TS) contents (2.5 %, 5.0 %, and 7.5 %). Biochar co-digestion improved hydrolysis and acidogenesis by neutralizing volatile fatty acids (VFAs) reducing its inhibitions (2.6-fold removal), which elevated the soluble chemical oxygen demand (sCOD) degradation by 2.5 folds leading to a higher cumulative methane production compared to the control. This increase corresponded to an improvement of methane yields by ∼21 %-33 % (242-340 mL/gVSadd) at different TS contents. The biochar surface area offered substantial support for direct interspecies electron transfer (DIET) activity, and biofilm-mediated growth of methanogens i.e., Methanosarcina, Methanosata, and Methanobrevibacter. The biochar-enriched digestate improved the seed germination index, and bioavailability of plant nutrients such as N, P, K, and NH4+-N. This study reports an improved biochar-mediated anaerobic co-digestion for efficient and sustainable FW valorization.

Mitigation of NH3 and N2O emissions during food waste digestate composting at C/N ratio 15 using zeolite amendment.

Composting of food waste digestate (FWD) is challenging as it requires more bulking agents, and the nitrogen loss is inevitable. To address these issues, FWD composting was conducted at a relatively lower C/N ratio of 15 with zeolite amendment in the dosage range of 5-15%. The impact of zeolite addition on nitrogen loss, NH3 and N2O emissions was assessed during FWD composting. The results showed that the addition of 10-15% zeolite could significantly reduce the phytotoxic nature of FWD and the compost maturity level could be reached in 10-21 days. Furthermore, ∼45% total nitrogen loss could be reduced by mitigating NH3 and N2O emissions upon 10 and 15% zeolite amendment. The outcome of the present study could be used as an effective strategy for composting FWD in any part of the world as the FWD characteristics are similar irrespective of the type of food waste.

Biodegradation kinetics of ammonium enriched food waste digestate compost with biochar amendment.

High concentration of NH4+-N in food waste digestate (FWD) produced from biological treatment of food waste is considered as a major threat on the composting process resulting in production of immature compost. Hence, a laboratory batch composting study was conducted to examine the feasibility of using biochar as a physical additive to ameliorate the inhibitory effect of NH4+-N and to mitigate the nitrogen loss during FWD composting. FWD was co-composted with tobacco biochar at a dosage of 0%, 2.5%, 5% or 10% (dw) in bench-scale composters with a controlled aeration system. The addition of 10% biochar enhanced the degradation rate resulting in 44% higher carbon decomposition than the control. Besides, 10% biochar amendment reduced NH3 and N loss by 58% and 5%, respectively and significantly reduced NH4+-N content to HKORC limit of < 700 mg/kg dw within 5 days showing the beneficiary impact of biochar addition.

Food waste digestate composting: Feedstock optimization with sawdust and mature compost.

Direct land application of food waste digestate (FWD) leads to 60-70% of nitrogen loss through NH3 volatilization due to its innate characteristics like high ammonium nitrogen (NH4+-N) (~6000 mg/kg dry matter) and high moisture content (~75%). Hence, bio stabilization of FWD through composting is a promising solution to curb the environmental and occupational hazards. Hence the aim of this study was to assess the feasibility of using sawdust and/or mature compost as a bulking agent to achieve effective composting. The results showed that mixing of FWD with sawdust alone or together with mature compost could produce quality compost with reduced NH4+-N (<700 mg/kg dry matter) and increased seed germination index (>80%) within 2 weeks of co-composting. Composting FWD with both sawdust and mature compost effectively reduced ~ 83% of NH3 volatilization demonstrating that this approach can effectively produce mature nitrogen enriched FWD compost.

A review on nitrogen dynamics and mitigation strategies of food waste digestate composting.

Food waste digestate is a by-product of the anaerobic digestion of food waste. Presence of high ammonium nitrogen content significantly increase the nitrogen loss upon direct application on soil or by conventional composting. In this review, a comprehensive discussion regarding the effective management of food waste digestate is outlined, in which global food waste digestate production, characteristics, and composting are discussed. The nitrogen dynamics cycle considering high ammonium nitrogen content in the digestate is also evaluated, including ammonification, nitrification, denitrification, and other possible mechanisms based on the current literature. Mitigation strategies for reducing nitrogen loss via C/N ratio adjustment and the addition of physical, chemical, and microbial amendments were evaluated and estimated for 15 countries based on the available data on food waste anaerobic digestion plants. Reduced nitrogen loss and high quality compost could be produced from food waste digestate by adapting mitigation strategies.

Performance assessment of improved composting system for food waste with varying aeration and use of microbial inoculum.

Wet waste recycling at generation point will alleviate burden on the overflowing waste dumpsites in developing nations. Drum composting is a potential treatment option for such waste at individual or community level. The present study was aimed to produce compost from wet waste (primarily comprising food waste) in composting drums modified for improved natural air circulation. Effect of microbial inoculum and waste turning on composting process was also studied. The final results showed the production of matured and stable compost in the modified drums. Addition of the microbial inoculum resulted in thermophilic phase within a week time. The self-heating test and germination index (>80%) showed the production of non-phytotoxic and mature compost in the modified drums after 60days. The change in microbial population, humic substances and biological parameters (lignin, cellulose and hemicellulose) during the study is discussed. Moreover, the reduction in waste mass and volume is also reported.

Effectiveness of clinical pharmacist intervention on health-related quality of life in chronic obstructive pulmonary disorder patients - a randomized controlled study.

WHAT IS KNOWN AND OBJECTIVE: Chronic obstructive pulmonary disease (COPD), a preventable and treatable disease, has been described as '10% medication and 90% education'. Extreme physician scarcity limits the implementation of quality healthcare delivery in India. We conducted this study to evaluate the effectiveness of clinical pharmacist intervention on health-related quality of life (HRQoL) in patients with COPD in an Indian tertiary care hospital. METHODS: An open-labelled randomized controlled study was conducted over a 3-year period, at Kasturba Medical College Hospital, Manipal, India, after obtaining institutional ethics clearance (IEC 88/2012). The study was registered with the Indian clinical trial registry (CTRI/2014/08/004848). Patients were randomly assigned to two groups (intervention group [IG] and control group [CG]) by envelope method. St. George's Respiratory Questionnaire (SGRQ) was used to assess the HRQoL. The pharmacist intervention laid emphasis on (i) importance of medication compliance, (ii) need for smoking cessation, (iii) simple exercise, (iv) proper use of inhaler devices and (v) need for timely follow-up by pulmonary medicine department. SGRQ assessment was repeated at 6, 12, 18 and 24 months. RESULTS: Of 328 patients with COPD screened during the study period (March 2012 to June 2013), 260 (79%) were recruited. Of these, 202 (78%) patients completed follow-up (98 in CG and 104 in IG). Both groups were matched for baseline, sociodemographics and clinical characteristics. SGRQ scores and its subscales (symptoms, activity and impact) improved significantly after the pharmacist intervention in IG at follow-up (P < 0·001). WHAT IS NEW AND CONCLUSION: Our randomized controlled study shows that pharmacist intervention improved the HRQoL of patients with COPD in India. The generalizability of our results requires exploration even within other settings in India. Nonetheless, our results provide support for a greater involvement of pharmacists in the care of patients with COPD.