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Eur J Hum Genet ; 29(7): 1103-1109, 2021 07.
Article in English | MEDLINE | ID: mdl-33619332

ABSTRACT

Hereditary Diffuse Gastric Cancer (HDGC) syndrome is associated with CDH1 germline likely pathogenic/pathogenic variants. Carriers of CDH1 germline likely pathogenic/pathogenic variants are predisposed to diffuse gastric cancer and lobular breast cancer. This study aims to classify the CDH1 c.[715G>A] missense variant identified in a diffuse gastric cancer prone family by performing splicing studies. RT-PCR and subsequent cloning experiments were performed to investigate whether this variant completely disrupts normal splicing. This variant preferentially abolishes normal splicing through activation of a cryptic 3' acceptor splice site within exon 6 of CDH1, presumably leading to a premature protein truncation within first extracellular domain repeat of E-cadherin protein. Our results contributed to evidence necessary to resolve pathogenicity classification of this variant, indicating that this variant is to be classified as pathogenic.


Subject(s)
Alleles , Amino Acid Substitution , Antigens, CD/genetics , Cadherins/genetics , Genetic Association Studies , Genetic Predisposition to Disease , Genotype , Mutation , Biopsy , Computational Biology/methods , DNA Mutational Analysis , Databases, Genetic , Female , Humans , Immunohistochemistry , Male , Pedigree , RNA Splice Sites , RNA Splicing , Stomach Neoplasms/diagnosis , Stomach Neoplasms/genetics
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