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1.
Elife ; 72018 12 14.
Article in English | MEDLINE | ID: mdl-30547884

ABSTRACT

The delta-protocadherins (δ-Pcdhs) play key roles in neural development, and expression studies suggest they are expressed in combination within neurons. The extent of this combinatorial diversity, and how these combinations influence cell adhesion, is poorly understood. We show that individual mouse olfactory sensory neurons express 0-7 δ-Pcdhs. Despite this apparent combinatorial complexity, K562 cell aggregation assays revealed simple principles that mediate tuning of δ-Pcdh adhesion. Cells can vary the number of δ-Pcdhs expressed, the level of surface expression, and which δ-Pcdhs are expressed, as different members possess distinct apparent adhesive affinities. These principles contrast with those identified previously for the clustered protocadherins (cPcdhs), where the particular combination of cPcdhs expressed does not appear to be a critical factor. Despite these differences, we show δ-Pcdhs can modify cPcdh adhesion. Our studies show how intra- and interfamily interactions can greatly amplify the impact of this small subfamily on neuronal function.


Subject(s)
Cadherins/genetics , Gene Expression Profiling , Olfactory Receptor Neurons/metabolism , Protein Precursors/genetics , Animals , Cadherins/metabolism , Cell Adhesion/genetics , Cells, Cultured , Female , Humans , K562 Cells , Male , Mice, Inbred C57BL , Mutation , Olfactory Receptor Neurons/cytology , Protein Isoforms/genetics , Protein Isoforms/metabolism , Protein Precursors/metabolism , Single-Cell Analysis/methods
2.
Biochemistry ; 57(7): 1073-1086, 2018 02 20.
Article in English | MEDLINE | ID: mdl-29300467

ABSTRACT

The ATPase domain of members of the 70 kDa heat shock protein (Hsp70) family shows a high degree of sequence, structural, and functional homology across species. A broadly conserved residue within the Hsp70 ATPase domain that captured our attention is an unpaired cysteine, positioned proximal to the site of nucleotide binding. Prior studies of several Hsp70 family members show this cysteine is not required for Hsp70 ATPase activity, yet select amino acid replacements of the cysteine can dramatically alter ATP hydrolysis. Moreover, post-translational modification of the cysteine has been reported to limit ATP hydrolysis for several Hsp70s. To better understand the underlying mechanism for how perturbation of this noncatalytic residue modulates Hsp70 function, we determined the structure for a cysteine-to-tryptophan mutation in the constitutively expressed, mammalian Hsp70 family member Hsc70. Our work reveals that the steric hindrance produced by a cysteine-to-tryptophan mutation disrupts the hydrogen-bond network within the active site, resulting in a loss of proper catalytic magnesium coordination. We propose that a similarly altered active site is likely observed upon post-translational oxidation. We speculate that the subtle changes we detect in the hydrogen-bonding network may relate to the previously reported observation that cysteine oxidation can influence Hsp70 interdomain communication.


Subject(s)
Adenosine Triphosphatases/genetics , Cysteine/genetics , HSC70 Heat-Shock Proteins/genetics , Point Mutation , Adenosine Triphosphatases/chemistry , Adenosine Triphosphatases/metabolism , Adenosine Triphosphate/metabolism , Amino Acid Sequence , Crystallography, X-Ray , Cysteine/chemistry , Cysteine/metabolism , HSC70 Heat-Shock Proteins/chemistry , HSC70 Heat-Shock Proteins/metabolism , Humans , Hydrogen Bonding , Hydrolysis , Models, Molecular , Sequence Alignment
3.
J Mol Biol ; 428(20): 4168-4184, 2016 10 09.
Article in English | MEDLINE | ID: mdl-27543005

ABSTRACT

Among the amino acids, cysteine stands apart based on its highly reactive sulfur group. In general, cysteine is underrepresented in proteins. Yet, when present, the features of cysteine often afford unique function. We have shown previously that a cysteine within the ATPase domain of yeast BiP (Kar2) serves as a sensor of the endoplasmic reticulum (ER) redox environment [1, 2]. Under conditions of increased oxidant (oxidative stress), this cysteine becomes oxidized, changing Kar2 from an ATP-dependent foldase to an ATP-independent holdase. We were struck by the high degree of conservation for this cysteine between BiP orthologs, and we sought to determine how cysteine substitution impacts Kar2 function. We observed that no single amino acid replacement is capable of recreating the range of functions that can be achieved by wild-type Kar2 with its cysteine in either unmodified or oxidized states. However, we were able to generate mutants that could selectively replicate the distinct activities exhibited by either unmodified or oxidized Kar2. We found that the ATPase activity displayed by unmodified Kar2 is fully maintained when Cys63 is replaced with Ala or Val. Conversely, we demonstrate that several amino acid substitutions (including His, Phe, Pro, Trp, and Tyr) support an enhanced viability during oxidative stress associated with oxidized Kar2, although these alleles are compromised as an ATPase. We reveal that the range of activity demonstrated by wild-type Kar2 can be replicated by co-expression of Kar2 mutants that mimic either the unmodified or oxidized Kar2 state, allowing for growth during standard and oxidative stress conditions.


Subject(s)
Adenosine Triphosphatases/genetics , Adenosine Triphosphatases/metabolism , Cysteine/genetics , Cysteine/metabolism , Fungal Proteins/genetics , Fungal Proteins/metabolism , HSP70 Heat-Shock Proteins/genetics , HSP70 Heat-Shock Proteins/metabolism , Saccharomyces cerevisiae/enzymology , Amino Acid Substitution , Conserved Sequence , Mutagenesis, Site-Directed , Oxidation-Reduction , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/growth & development
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