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1.
J Food Sci ; 89(9): 5812-5822, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39126699

ABSTRACT

Time-temperature data for queso fresco (QF) cheese varieties stored in a residential refrigerator operating at 5°C and a predictive microbiology secondary model for Listeria monocytogenes in QF were used to estimate a refrigerator performance indicator (RPI) of microbial preservation. RPI values were used to assess how compressor technology (single [SS] and variable speed [VS]), ambient temperature (21.1°C [LT] and 32.2°C [HT]), and refrigerator load (22.5 kg regular load and 39 kg higher load) affected preservation performance. All deterministic and probabilistic RPI estimations slightly exceeded the desirable 1.0 value, i.e., the variable temperatures for the QF kept in the refrigerator were worse than keeping it constantly at the temperature recommended by food safety agencies for QF. Furthermore, the mean comparison of estimates of the time-temperature equivalent indicator previously developed by French researchers showed similar behavior to those observed for RPI. Finally, statistical analysis showed that Tambient was the factor with the highest impact on refrigerator performance because of its impact on the sample temperature increase during door openings and when exposed to ambient temperature during product use. This highlights the need to reduce the time for product temperature recovery by improving the compressor operation logic. Also important are consumer behavior changes such as a reduction in product exposure to ambient temperature and in the door opening duration and frequency. PRACTICAL APPLICATION: This study demonstrated how a quantitative tool (RPI) can assess refrigerator preservation performance. Although the findings presented can be applied to any cold chain segment, the data used was collected for its weakest link, the domestic refrigerator. Surveys show that 77% of them operate above the recommended 4°C. The RPI methodology is ready for use by refrigerator designers to assess performance improvements possible by modifications of the compressor operation logic. Moreover, it can be integrated into smart-hubs monitoring the frequency and duration of refrigerator door openings to inform consumers when their habits are compromising the preservation performance of the refrigerator.


Subject(s)
Cheese , Food Microbiology , Food Preservation , Listeria monocytogenes , Refrigeration , Refrigeration/methods , Listeria monocytogenes/growth & development , Listeria monocytogenes/isolation & purification , Food Microbiology/methods , Food Preservation/methods , Cheese/microbiology , Temperature , Time Factors , Food Storage/methods , Colony Count, Microbial/methods
2.
Fish Shellfish Immunol ; 151: 109742, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38960109

ABSTRACT

Rainbow trout is an important fish species for Peruvian artisanal aquaculture, comprising over 60 % of the total aquaculture production. However, their industry has been highly affected by several bacterial agents such as Yersinia ruckeri. This pathogen is the causative agent of Enteric Redmouth Disease, and causes high mortality in fingerlings and chronic infection in adult rainbow trout. To date, the immune response of rainbow trout against Y. ruckeri has been well studied in laboratory-controlled infection studies (i.e. intraperitoneal infection, bath immersion), however, the immune response during natural infection has not been explored. To address this, in this study, 35 clinically healthy O. mykiss without evidence of lesions or changes in behavior and 32 rainbow trout naturally infected by Y. ruckeri, were collected from semi-intensive fish farms located in the Central Highlands of Peru. To evaluate the effect on the immune response, RT-qPCR, western blotting, and ELISA were conducted using head kidney, spleen, and skin tissues to evaluate the relative gene expression and protein levels. Our results show a significant increase in the expression of the pro-inflammatory cytokines il1b, tnfa, and il6, as well as ifng in all three tissues, as well as increases in IL-1ß and IFN-γ protein levels. The endogenous pathway of antigen presentation showed to play a key role in defense against Y. ruckeri, due to the upregulation of mhc-I, tapasin, and b2m transcripts, and the significant increase of Tapasin protein levels in infected rainbow trout. None of the genes associated with the exogenous pathway of antigen presentation showed a significant increase in infected fish, suggesting that this pathway is not involved in the response against this intracellular pathogen. Finally, the transcripts of immunoglobulins IgM and IgT did not show a modulation, nor were the protein levels evaluated in this study.


Subject(s)
Adaptive Immunity , Fish Diseases , Immunity, Innate , Oncorhynchus mykiss , Yersinia Infections , Yersinia ruckeri , Animals , Oncorhynchus mykiss/immunology , Yersinia ruckeri/physiology , Yersinia Infections/veterinary , Yersinia Infections/immunology , Fish Diseases/immunology , Immunity, Innate/genetics , Fish Proteins/genetics , Fish Proteins/immunology , Peru
3.
Curr Issues Mol Biol ; 46(6): 5909-5928, 2024 Jun 13.
Article in English | MEDLINE | ID: mdl-38921024

ABSTRACT

Uropathogenic Escherichia coli (UPEC) is the main cause of urinary tract infections (UTIs) and carries virulence and resistance factors often found in mobilizable genetic elements, such as plasmids or pathogenicity islands (PAIs). UPEC is part of the extraintestinal pathogenic E. coli (ExPEC), but hybrid strains possessing both diarrheagenic E. coli (DEC) and ExPEC traits, termed "hypervirulent", present a significant health threat. This study assessed the prevalence of UPEC PAIs, ExPEC sequence types (ST), DEC genes, carbapenemase and extended-spectrum ß-lactamase (ESBL) phenotypes, resistance genotypes, and plasmids in 40 clinical isolates of UPEC. Results showed that 72.5% of isolates had PAIs, mainly PAI IV536 (53%). ESBL phenotypes were found in 65% of ß-lactam-resistant isolates, with 100% of carbapenem-resistant isolates producing carbapenemase. The predominant ESBL gene was blaCTX-M-2 (60%), and the most common resistance gene in fluoroquinolone and aminoglycoside-resistant isolates was aac(6')Ib (93%). Plasmids were present in 57% of isolates, and 70% belonged to the ST131 clonal group. Molecular markers for DEC pathotypes were detected in 20 isolates, with 60% classified as hybrid pathotypes. These findings indicate significant pathogenic potential and the presence of hybrid pathotypes in E. coli UTI clinical isolates in the Mexican population.

4.
Front Cell Infect Microbiol ; 14: 1348093, 2024.
Article in English | MEDLINE | ID: mdl-38516533

ABSTRACT

Introduction: Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacter spp. are microorganisms referred as the ESKAPE group pathogens. These microorganisms have generated great concern in health institutions around the world since most of them have resistance to multiple antibiotics and cause most infections associated with healthcare, as well as community infections. The aim of this study was the analysis of antibiotic resistance in microorganisms of the ESKAPE group, recovered from clinical samples in 11 health institutions from Hermosillo and Ciudad Obregón in the State of Sonora, México, during the period from 2019 to 2020. Methods: A cross-sectional, descriptive, observational, and temporality epidemiological study was carried out. A comparative and statistical analysis of antibiotic resistance was carried out using the chi-square test, and small values were analyzed using Fisher's exact test p ≤ 0.05. Results and discussion: All the ESKAPE group microorganisms showed significant differences in antibiotic resistance percentages between both cities. High resistance percentages for some antibiotics, like cephalosporins and ciprofloxacin were detected for Klebsiella pneumoniae and Acinetobacter baumannii.


Subject(s)
Acinetobacter baumannii , Klebsiella pneumoniae , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Cross-Sectional Studies , Drug Resistance, Multiple, Bacterial , Mexico , Humans
5.
World J Clin Oncol ; 15(2): 195-207, 2024 Feb 24.
Article in English | MEDLINE | ID: mdl-38455133

ABSTRACT

Interferon-gamma (IFN-γ) plays a dual role in cancer; it is both a pro- and an antitumorigenic cytokine, depending on the type of cancer. The deregulation of the IFN-γ canonic pathway is associated with several disorders, including vulnerability to viral infections, inflammation, and cancer progression. In particular, the interplay between lung adenocarcinoma (LUAD) and viral infections appears to exist in association with the deregulation of IFN-γ signaling. In this mini-review, we investigated the status of the IFN-γ signaling pathway and the expression level of its components in LUAD. Interestingly, a reduction in IFNGR1 expression seems to be associated with LUAD progression, affecting defenses against viruses such as severe acute respiratory syndrome coronavirus 2. In addition, alterations in the expression of IFNGR1 may inhibit the antiproliferative action of IFN-γ signaling in LUAD.

6.
Nutrients ; 16(3)2024 Jan 27.
Article in English | MEDLINE | ID: mdl-38337665

ABSTRACT

Brain physiology and morphology are vulnerable to chronic stress, impacting cognitive performance and behavior. However, functional compounds found in food may alleviate these alterations. White quinoa (Chenopodium quinoa, Wild) seeds contain a high content of n-3 fatty acids, including alpha-linolenic acid. This study aimed to evaluate the potential neuroprotective role of a quinoa-based functional food (QFF) in rats. Prepubertal male Sprague-Dawley rats were fed with rat chow or QFF (50% rat chow + 50% dehydrated quinoa seeds) and exposed or not to restraint stress protocol (2 h/day; 15 days). Four experimental groups were used: Non-stressed (rat chow), Non-stressed + QFF, Stressed (rat chow) and Stressed + QFF. Weight gain, locomotor activity (open field), anxiety (elevated plus maze, light-dark box), spatial memory (Y-maze), and dendritic length in the hippocampus were measured in all animals. QFF intake did not influence anxiety-like behaviors, while the memory of stressed rats fed with QFF improved compared to those fed with rat chow. Additionally, QFF intake mitigated the stress-induced dendritic atrophy in pyramidal neurons located in the CA3 area of the hippocampus. The results suggest that a quinoa-supplemented diet could play a protective role in the memory of chronically stressed rats.


Subject(s)
Chenopodium quinoa , Rats , Animals , Male , Rats, Sprague-Dawley , Maze Learning , Dietary Supplements , Hippocampus/physiology , Stress, Psychological/psychology
7.
Sci Rep ; 13(1): 16515, 2023 10 02.
Article in English | MEDLINE | ID: mdl-37783717

ABSTRACT

Biomass cookstove food preparation is linked to aero-digestive cancers, mediated by ingested and inhaled carcinogens (e.g., heterocyclic amines, and polycyclic aromatic hydrocarbons). We investigated the association between gastric adenocarcinoma, wood cookstove use, H. pylori CagA infection and risk modification by variants in genes that metabolize and affect the internal dose of carcinogens. We conducted a population-based, case-control study (814 incident cases, 1049 controls) in rural Honduras, a high-incidence region with a homogeneous diet and endemic H. pylori infection, primarily with the high-risk CagA genotype. We investigated factors including wood cookstove use, H. pylori CagA serostatus, and 15 variants from 7 metabolizing genes, and the interactions between wood stove use and the genetic variants. Male sex (OR 2.0, 1.6-2.6), age (OR 1.04, 1.03-1.05), wood cookstove use (OR 2.3, 1.6-3.3), and CagA serostatus (OR 3.5, 2.4-5.1) and two SNPs in CYP1B1 (rs1800440 and rs1056836) were independently associated with gastric cancer in multivariate analysis. In the final multivariate model, a highly significant interaction (OR 3.1, 1.2-7.8) was noted between wood cookstove use and the rs1800440 metabolizing genotype, highlighting an important gene-environment interaction. Lifetime wood cookstove use associates with gastric cancer risk in the high-incidence regions of Central America, and the association is dependent on the rs1800440 genotype in CYP1B1. H. pylori CagA infection, wood cookstove use and the rs1800440 genotype, all of which are highly prevalent, informs who is at greatest risk from biomass cookstove use.


Subject(s)
Helicobacter Infections , Helicobacter pylori , Stomach Neoplasms , Male , Humans , Stomach Neoplasms/etiology , Stomach Neoplasms/genetics , Risk Factors , Case-Control Studies , Wood , Genotype , Central America , Helicobacter pylori/genetics , Helicobacter Infections/complications , Bacterial Proteins/genetics , Antigens, Bacterial/genetics
8.
Pathogens ; 12(9)2023 Sep 07.
Article in English | MEDLINE | ID: mdl-37764952

ABSTRACT

We analyzed the antimicrobial resistance (AMR) data of 6519 clinical isolates of Escherichia coli (n = 3985), Klebsiella pneumoniae (n = 775), Acinetobacter baumannii (n = 163), Pseudomonas aeruginosa (n = 781), Enterococcus faecium (n = 124), and Staphylococcus aureus (n = 691) from 43 centers in Mexico. AMR assays were performed using commercial microdilution systems (37/43) and the disk diffusion susceptibility method (6/43). The presence of carbapenemase-encoding genes was assessed using PCR. Data from centers regarding site of care, patient age, and clinical specimen were collected. According to the site of care, the highest AMR was observed in E. coli, K. pneumoniae, and P. aeruginosa isolates from ICU patients. In contrast, in A. baumannii, higher AMR was observed in isolates from hospitalized non-ICU patients. According to age group, the highest AMR was observed in the ≥60 years age group for E. coli, E. faecium, and S. aureus, and in the 19-59 years age group for A. baumannii and P. aeruginosa. According to clinical specimen type, a higher AMR was observed in E. coli, K. pneumoniae, and P. aeruginosa isolates from blood specimens. The most frequently detected carbapenemase-encoding gene in E. coli was blaNDM (84%).

9.
J Vis Exp ; (193)2023 03 03.
Article in English | MEDLINE | ID: mdl-36939240

ABSTRACT

IL-9 is a pleiotropic cytokine associated with various processes, including antitumor immunity, induction of allergic pathologies, and the immune response against helminth infections, where it plays an important role in the expulsion of the parasite. In a murine model of Nippostrongylus brasiliensis infection, IL-9 is produced mainly by CD4+ T lymphocytes and innate lymphoid cells found in the lung, small intestine, and draining lymph nodes. Given the technical difficulties involved in the intracellular staining of IL-9, as well as the complexity of isolating hematopoietic cells from the small intestine upon infection, there is a pressing need for a comprehensive but straightforward protocol to analyze the expression of IL-9 in different lymphoid and non-lymphoid tissues in this model. The protocol described here outlines the kinetics of IL-9 produced by CD4+ T cells and innate lymphoid cells in the lung and small intestine, the main organs targeted by N. brasiliensis, as well as in the mediastinal and mesenteric lymph nodes, throughout the infection. In addition, it details the number of larvae needed for infection, depending on the cell type and organ of interest. This protocol aims to assist in the standardization of assays to save time and resources by offering the opportunity to focus on the specific cells, organs, and disease stages of interest in the N. brasiliensis infection model.


Subject(s)
Interleukin-9 , Nippostrongylus , Mice , Animals , Nippostrongylus/physiology , Interleukin-9/metabolism , Immunity, Innate , Cytokines/metabolism , CD4-Positive T-Lymphocytes
10.
Arch Med Res ; 54(3): 247-260, 2023 04.
Article in English | MEDLINE | ID: mdl-36725379

ABSTRACT

BACKGROUND: Urinary tract infections (UTI) are one of the most common pathologies in Mexico and the majority are caused by uropathogenic Escherichia coli (UPEC). UPEC possesses virulence and resistance determinants that promote UTI development and affect diagnosis and treatment. This study aims to systematically review published reports of virulence genes, antibiotic resistance, and phylogenetic groups prevalent in clinical isolates of UPEC in the Mexican population. METHODS: Systematic review with meta-analysis was performed following PRISMA guidelines. Articles in both English and Spanish were included. Total prevalence with a 95% confidence interval of each characteristic was calculated. Heterogeneity between studies and geographical areas was assessed by the Cochran Q test (Q), I-square (I2), and H-square (H2). Egger's test was used for risk of bias in publications and asymmetry evaluations. RESULTS: Forty-two articles were analyzed. The most prevalent virulence genes were ecp (97.25%; n = 364) and fimH (82.34%; n = 1,422), which are associated with lower UTI, followed by papGII (40.98%; n = 810), fliC (38.87%; n = 319), hlyA (23.55%; n = 1,521), responsible for with upper UTI. More than 78.13% (n = 1,893) of the isolates were classified as multidrug-resistant, with a higher prevalence of resistance to those antibiotics that are implemented in the basic regimen in Mexico. The most frequently reported Extended Spectrum ß-Lactamase (ESBL) was CTX-M-1 (55.61%; n = 392), and the predominant phylogroup was B2 (35.94%; n = 1,725). CONCLUSION: UPEC strains are responsible for a large portion of both lower and upper UTI in Mexico, and their multi-drug resistance drastically reduces the number of therapeutic options available.


Subject(s)
Escherichia coli Infections , Urinary Tract Infections , Uropathogenic Escherichia coli , Humans , Virulence/genetics , Uropathogenic Escherichia coli/genetics , Escherichia coli Infections/drug therapy , Escherichia coli Infections/epidemiology , Virulence Factors/genetics , Virulence Factors/therapeutic use , Mexico/epidemiology , Phylogeny , Anti-Bacterial Agents/therapeutic use , Urinary Tract Infections/drug therapy , Urinary Tract Infections/epidemiology
11.
PeerJ ; 11: e14411, 2023.
Article in English | MEDLINE | ID: mdl-36684666

ABSTRACT

Background: Antimicrobial resistance is a global concern. Analysis of sterile fluids is essential because microorganisms are defined as significant in most cases. Blood, cerebrospinal, and pleural fluids are frequently received in the microbiology lab because they are associated with considerable rates of morbi-mortality. Knowledge of epidemiology in these samples is needed to choose proper empirical treatments due to the importance of reducing selection pressure. Methods: We used retrospective laboratory data of blood, CSF, and pleural fluid collected from patients in Mexico between 2019 and 2020. Each laboratory identified the strains and tested susceptibility using its routine methods. For Streptococcus pneumoniae, a comparative analysis was performed with data from the broth microdilution method. Results: Forty-five centers participated in the study, with 30,746 clinical isolates from blood, 2,429 from pleural fluid, and 2,275 from CSF. For blood and CSF, Staphylococcus epidermidis was the most frequent. For blood, among gram negatives, the most frequent was Escherichia coli. Among Enterobacterales, 9.8% of K. pneumoniae were carbapenem-resistant. For S. pneumoniae, similar resistance percentages were observed for levofloxacin, cefotaxime, and vancomycin. For CSF, the most frequent gram-negative was E. coli. In Acinetobacter baumannii, carbapenem resistance was 71.4%. The most frequent species detected for pleural fluid was E. coli; in A. baumannii, carbapenem resistance was 96.3%. Conclusion: Gram-negative bacteria, with E. coli most prevalent, are frequently recovered from CSF, blood, and pleural fluid. In S. pneumoniae, the routine, conventional methods showed good agreement in detecting resistance percentages for erythromycin, levofloxacin, and vancomycin.


Subject(s)
Anti-Bacterial Agents , Vancomycin , Humans , Anti-Bacterial Agents/pharmacology , Vancomycin/pharmacology , Levofloxacin , Escherichia coli , Incidence , Retrospective Studies , Bacteria , Carbapenems , Drug Resistance
12.
J. Oral Diagn ; 8: e20230229, 01 out. 2023. ilus
Article in English | LILACS, BBO - Dentistry | ID: biblio-1572876

ABSTRACT

Solitary fibrous tumour (SFT) is a spindle-cell mesenchymal neoplasm, has been reported in various locations but the oral cavity is a distinctly uncommon region. Case report: a female patient, 30 years old with a painful tumour the lesion measured approximately 4 cm; computed tomography showed a heterogeneous large mass in palate extending to oral cavity preserving osseous tissue; an incisional biopsy was performed; histopatholo-gical examination demonstrated a circumscribed lesion composed mainly of hyalinized fibrous connective tissue with intermittent paucicellular and hypercellular areas and a hemangiopericytoma-like vasculature were noted. Immunohistochemically: were strongly positive for CD34, bcl-2 and vimentin but negative for S-100 protein, calponin, CD-99. CD-21, CD-23, CD-35, Fascin and EMA; a diagnosis of solitary fibrous tumor was made. The tumour was treated by complete surgical excision; no recurrence was noted at a 15-year follow-up. (AU)


Subject(s)
Humans , Female , Adult , Palate , Solitary Fibrous Tumors , Case Reports , Neoplasms
13.
PLoS Negl Trop Dis ; 16(7): e0010565, 2022 07.
Article in English | MEDLINE | ID: mdl-35857744

ABSTRACT

Timely, accurate, and comparative data on human mobility is of paramount importance for epidemic preparedness and response, but generally not available or easily accessible. Mobile phone metadata, typically in the form of Call Detail Records (CDRs), represents a powerful source of information on human movements at an unprecedented scale. In this work, we investigate the potential benefits of harnessing aggregated CDR-derived mobility to predict the 2015-2016 Zika virus (ZIKV) outbreak in Colombia, when compared to other traditional data sources. To simulate the spread of ZIKV at sub-national level in Colombia, we employ a stochastic metapopulation epidemic model for vector-borne diseases. Our model integrates detailed data on the key drivers of ZIKV spread, including the spatial heterogeneity of the mosquito abundance, and the exposure of the population to the virus due to environmental and socio-economic factors. Given the same modelling settings (i.e. initial conditions and epidemiological parameters), we perform in-silico simulations for each mobility network and assess their ability in reproducing the local outbreak as reported by the official surveillance data. We assess the performance of our epidemic modelling approach in capturing the ZIKV outbreak both nationally and sub-nationally. Our model estimates are strongly correlated with the surveillance data at the country level (Pearson's r = 0.92 for the CDR-informed network). Moreover, we found strong performance of the model estimates generated by the CDR-informed mobility networks in reproducing the local outbreak observed at the sub-national level. Compared to the CDR-informed networks, the performance of the other mobility networks is either comparatively similar or substantially lower, with no added value in predicting the local epidemic. This suggests that mobile phone data captures a better picture of human mobility patterns. This work contributes to the ongoing discussion on the value of aggregated mobility estimates from CDRs data that, with appropriate data protection and privacy safeguards, can be used for social impact applications and humanitarian action.


Subject(s)
Epidemics , Zika Virus Infection , Zika Virus , Animals , Colombia/epidemiology , Humans , Mosquito Vectors , Zika Virus Infection/epidemiology
14.
Front Immunol ; 13: 787713, 2022.
Article in English | MEDLINE | ID: mdl-35711429

ABSTRACT

Type 2 Innate lymphoid cells (ILC2s) are tissue-resident immune cells activated by epithelial-derived alarmins upon tissue damage. They regulate immunity against helminth parasites and allergies by expressing type 2 immune response cytokines including IL-9, known to be critical for inducing and potentiating the immune response in such context. Although ILC2s are reported to be the main source of IL-9 in mice during N. brasiliensis infection, the mechanisms that regulate the expression of IL-9 in these cells are yet to be described. Recent studies have shown that in addition to cytokines, multiple molecules can differentially modulate the functions of ILC2s in various contexts both in vitro and in vivo. Among these stimuli are lipid mediators and neuropeptides, which activate the PKA pathway and have been associated with the regulation of type 2 immune cytokines. In this work we found that ILC2s in mice infected with N. brasiliensis can be classified into different groups based on the expression of IL-9 and ST2. These distinct populations were distributed in the lung and the small intestine. Through the development of an in vitro culture system, we sought to determine the stimuli that regulate the expression of these markers in ILC2s. We identified the alarmin IL-33 as being a key player for increased IL-9 expression. Additionally, we found the PKA pathway to be a dual regulator of ILC2 cells, working synergistically with IL-33 to enhance IL-9 production and capable of modulating proliferation and the expression of ILC2 markers. These data provide further evidence of a high heterogeneity between ILC2 subsets in a context dependent manner and calls for careful consideration when choosing the markers to identify these cells in vivo. Distinguishing ILC2 subsets and dissecting their mechanisms of activation is critical for a deeper understanding of the biology of these cells, allowing their manipulation for therapeutic purposes.


Subject(s)
Immunity, Innate , Interleukin-33 , Animals , Cytokines , Interleukin-1 Receptor-Like 1 Protein/genetics , Interleukin-9/genetics , Lymphocytes , Mice
15.
J Oncol ; 2022: 7398444, 2022.
Article in English | MEDLINE | ID: mdl-35342410

ABSTRACT

Breast cancer (BCa) is one of the leading causes of death in women with these types of malignancies. Early detection is pivotal to improve prognosis and reduce mortality. Several proteins and genes have been proposed as biomarkers for cancer; however, further studies are required before a molecule is accepted as a definitive biomarker. This study was aimed at investigating the expression of survivin variants S-WT, S-2B, and S-ΔEx3, as well as adipokines LEP and ADIPOQ in breast cancer. Breast samples were obtained from patients with (n = 27) and without (n = 20) BCa, and relative gene expression was assessed by RT-qPCR. S-WT and S-2B showed a significant increase in BCa samples (p = 0.005 and p = 0.001, respectively) and in high-aggressiveness BCa (p = 0.026 and p = 0.037, respectively). Despite S-ΔEx3 expression remained globally unchanged, when dividing BCa samples according to the stage, this gene showed a significant tendency to increase towards more advanced stages, and the exact opposite effect was observed for LEP. Furthermore, LEP expression showed a negative correlation with S-2B (p = 0.005) and S-WT (p = 0.011), and in the same manner, ADIPOQ was negatively related with these two survivin variants (p = 0.001 and p = 0.005, respectively). Interestingly, S-ΔEx3 expression appears unaffected by LEP and ADIPOQ expressions. Our results highlight the importance of investigating specific variants of a given gene, as sequence variation may grant different correlation with other important structures and diseases.

16.
Microb Drug Resist ; 28(3): 338-345, 2022 Mar.
Article in English | MEDLINE | ID: mdl-34870473

ABSTRACT

Aim: This study aims to assess the changes in antimicrobial resistance among some critical and high-priority microorganisms collected previously and during the coronavirus disease 2019 (COVID-19) pandemic in Mexico. Methods: We collected antimicrobial susceptibility data for critical and high-priority microorganisms from blood, urine, respiratory samples, and from all specimens, in which the pathogen may be considered a causative agent. Data were stratified and compared for two periods: 2019 versus 2020 and second semester 2019 (prepandemic) versus the second semester 2020 (pandemic). Results: In the analysis of second semester 2019 versus the second semester 2020, in blood samples, increased resistance to oxacillin (15.2% vs. 36.9%), erythromycin (25.7% vs. 42.8%), and clindamycin (24.8% vs. 43.3%) (p ≤ 0.01) was detected for Staphylococcus aureus, to imipenem (13% vs. 23.4%) and meropenem (11.2% vs. 21.4) (p ≤ 0.01), for Klebsiella pneumoniae. In all specimens, increased ampicillin and tetracycline resistance was detected for Enterococcus faecium (p ≤ 0.01). In cefepime, meropenem, levofloxacin, and gentamicin (p ≤ 0.01), resistance was detected for Escherichia coli; and in piperacillin-tazobactam, cefepime, imipenem, meropenem, ciprofloxacin, levofloxacin, and gentamicin (p ≤ 0.01), resistance was detected for Pseudomonas aeruginosa. Conclusion: Antimicrobial resistance increased in Mexico during the COVID-19 pandemic. The increase in oxacillin resistance for S. aureus and carbapenem resistance for K. pneumoniae recovered from blood specimens deserves special attention. In addition, an increase in erythromycin resistance in S. aureus was detected, which may be associated with high azithromycin use. In general, for Acinetobacter baumannii and P. aeruginosa, increasing resistance rates were detected.


Subject(s)
Bacterial Infections/epidemiology , Bacterial Infections/microbiology , COVID-19/epidemiology , Drug Resistance, Multiple, Bacterial , Humans , Mexico/epidemiology , Microbial Sensitivity Tests , Pandemics , SARS-CoV-2
17.
Int. j. odontostomatol. (Print) ; 15(4): 915-921, dic. 2021. tab
Article in Spanish | LILACS | ID: biblio-1385824

ABSTRACT

RESUMEN: Una mala calidad del sueño y estrés, pueden ser la génesis de anomalías temporomandibulares que consisten en una familia heterogénea de desórdenes músculoesqueletales que representan la afección de dolor orofacial crónica más común. El objetivo de este trabajo fue relacionar la calidad del sueño, estrés percibido y desórdenes temporomandibulares dolorosos en adultos jóvenes de dos comunidades mexicanas (Puebla y Yucatán). Material y Métodos: estudio de tipo correlacional, analítico, prospectivo, de corte transversal. Se obtuvo consentimiento informado y voluntario por medio de firmas de 552 sujetos adultos jóvenes: 276 de Puebla (P), 53 % (n=147) mujeres, 47 % (n= 129) hombres, con un promedio de 28 años (± 4,5); y 276 sujetos de Yucatán (Y), 58 % (n=161) mujeres, 42 % (n= 115) hombres, con un promedio de 27 años (±4,9). Se les realizó entrevistas con base a tres cuestionarios: Índice de Calidad de Sueño de Pittsburg (ICSP), Escala de Estrés Percibido de Cohen (EEP) e Instrumento de Examinación de Desórdenes Temporomandibulares Doloroso de González (IEDTD). Para el análisis estadístico se utilizó estadística descriptiva (frecuencias y porcentajes), regresión logística y correlación de Pearson. Puebla presenta un porcentaje mayor de individuos con calidad de sueño pobre 83 %, comparado con Yucatán, 56 %. De la misma forma, Puebla muestra un porcentaje mayor de individuos con estrés alto, 82 %, comparado con Yucatán, 74 %. Por otro lado, Puebla presenta un porcentaje mayor de individuos con DTM dolorosos, 33 %, comparado con Yucatán, 11 %. Asimismo, existe una correlación moderada general entre el estrés percibido y la calidad del sueño en mujeres (0,335) y edades de 30 a 35 años (0,383) ambas con una significancia de p <0,001. La calidad de sueño pobre aumenta 4 veces la posibilidad de padecer un DTM doloroso. Vivir en Puebla aumenta hasta 3.1 veces la posibilidad de un DTM doloroso.


ABSTRACT: Por sleep quality and stress may be the génesis of temporomandibular disorders that consist of a heterogeneous family of musculoskeletal disorders that represent the most common chronic orofacial pain condition. The objective of the study was to relate sleep quality, perceived stress, and painful temporomandibular disorders in Young adults from two Mexican communities (Puebla and Yucatán). a correlational, analytical, prospective, cross- sectional study. Informed and voluntary consent was obtained through the signatures of 552 young adult subjects: 276 from Puebla (P), 53 % (n = 147) women, 47 % (n = 129) men, with an average of 28 years (± 4.5); and 276 subjects from Yucatán (Y), 58 % (n = 161) women, 42 % (n = 115) men, with an average age of 27 years (±4.9). Interviews were conducted based on three questionnaires: Pittsburg Sleep Quality Index (ICSP), Cohen's Perceived Stress Scale (EEP) and González's Painful Temporomandibular Disorders Examination Instrument (IEDTD). Descriptive statistics (frequencies and percentages), logistic regression and Pearson's correlation were used for statistical analysis. Puebla has a higher percentage of individuals with por sleep quality, 83 %, compared to Yucatán, 56 %. In the same way, Puebla shows a higher percentage of individuals with high stress, 82 %, compared to Yucatán, 74 %. On the other hand, Puebla has a higher percentage of individuals with painful TMD, 33 %, compared to Yucatán, 11 %. Likewise, there is a general moderate correlation between perceived stress and sleep quality in women (0.335) and ages 30 to 35 years (0.383), both with a significance of p <.001. Poor sleep quality increases the chance of painful TMD by 4 times. Living in Puebla increases the possibility of painful TMD up to 3.1 times.


Subject(s)
Humans , Male , Female , Adolescent , Adult , Temporomandibular Joint Disorders/pathology , Temporomandibular Joint Disorders/epidemiology , Stress, Psychological/complications , Laboratory and Fieldwork Analytical Methods , Prospective Studies , Age and Sex Distribution , Correlation of Data , Sleep Quality , Mexico
18.
Microorganisms ; 9(11)2021 Nov 18.
Article in English | MEDLINE | ID: mdl-34835506

ABSTRACT

Urinary tract infections (UTIs) belong to the most common pathologies in Mexico and are mainly caused by Uropathogenic Escherichia coli (UPEC). UPEC possesses a wide diversity of virulence factors that allow it to carry out its pathogenesis mechanism in the urinary tract (UT). The development of morphotypes in UT represents an important feature of UPEC because it is associated with complications in diagnosis of UTI. The aim of this study was to determine the presence of bacterial morphotypes, virulence genes, virulence phenotypes, antibiotic resistant, and phylogenetic groups in clinical isolates of UPEC obtained from women in Sonora, Mexico. Forty UPEC isolates were obtained, and urine morphotypes were observed in 65% of the urine samples from where E. coli was isolated. Phylogenetic group B2 was the most prevalent. The most frequent virulence genes were fimH (100%), fliCD (90%), and sfaD/focC (72%). Biofilm formation (100%) and motility (98%) were the most prevalent phenotypes. Clinical isolates showed high resistance to aminoglycosides and ß-lactams antibiotics. These data suggest that the search for morphotypes in urine sediment must be incorporated in the urinalysis procedure and also that clinical isolates of UPEC in this study can cause upper, lower, and recurrent UTI.

19.
Front Immunol ; 12: 757967, 2021.
Article in English | MEDLINE | ID: mdl-34759931

ABSTRACT

Innate lymphoid cells (ILCs) are the most recently described group of lymphoid subpopulations. These tissue-resident cells display a heterogeneity resembling that observed on different groups of T cells, hence their categorization as cytotoxic NK cells and helper ILCs type 1, 2 and 3. Each one of these groups is highly diverse and expresses different markers in a context-dependent manner. Type 2 innate lymphoid cells (ILC2s) are activated in response to helminth parasites and regulate the immune response. They are involved in the etiology of diseases associated with allergic responses as well as in the maintenance of tissue homeostasis. Markers associated with their identification differ depending on the tissue and model used, making the study and understanding of these cells a cumbersome task. This review compiles evidence for the heterogeneity of ILC2s as well as discussion and analyses of molecular markers associated with their identity, function, tissue-dependent expression, and how these markers contribute to the interaction of ILC2s with specific microenvironments to maintain homeostasis or respond to pathogenic challenges.


Subject(s)
Antigens, Differentiation/analysis , Lymphocyte Subsets/immunology , Adipose Tissue, White/immunology , Adipose Tissue, White/pathology , Animals , Cytokines/metabolism , Helminthiasis/immunology , Histocompatibility Antigens Class II/immunology , Homeostasis , Humans , Immunophenotyping , Inflammation , Intestines/immunology , Lung/immunology , Lymphocyte Subsets/chemistry , Mice , Nutrients , Organ Specificity , Proto-Oncogene Proteins c-kit/immunology , Receptors, Cell Surface/immunology , Skin/immunology , Stem Cell Factor/immunology
20.
Nat Commun ; 12(1): 5379, 2021 09 10.
Article in English | MEDLINE | ID: mdl-34508077

ABSTRACT

Probabilistic forecasts play an indispensable role in answering questions about the spread of newly emerged pathogens. However, uncertainties about the epidemiology of emerging pathogens can make it difficult to choose among alternative model structures and assumptions. To assess the potential for uncertainties about emerging pathogens to affect forecasts of their spread, we evaluated the performance 16 forecasting models in the context of the 2015-2016 Zika epidemic in Colombia. Each model featured a different combination of assumptions about human mobility, spatiotemporal variation in transmission potential, and the number of virus introductions. We found that which model assumptions had the most ensemble weight changed through time. We additionally identified a trade-off whereby some individual models outperformed ensemble models early in the epidemic, but on average the ensembles outperformed all individual models. Our results suggest that multiple models spanning uncertainty across alternative assumptions are necessary to obtain robust forecasts for emerging infectious diseases.


Subject(s)
Communicable Diseases, Emerging/epidemiology , Epidemics/statistics & numerical data , Epidemiological Monitoring , Zika Virus Infection/epidemiology , Colombia/epidemiology , Data Interpretation, Statistical , Datasets as Topic , Forecasting/methods , Humans , Models, Statistical , Spatio-Temporal Analysis , Uncertainty
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