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1.
Biomedica ; 42(4): 623-632, 2022 12 01.
Article in English, Spanish | MEDLINE | ID: mdl-36511680

ABSTRACT

INTRODUCTION: Amyotrophic lateral sclerosis is a neurodegenerative disease with a possible multifactorial origin characterized by the progressive degeneration of motor neurons. There is a relatively high prevalence of this disease in Antioquia; however, there is no published genetic study to date in Colombia. Despite its unknown etiopathogenesis, more genetic risk factors possibly involved in the development of this disease are constantly found. OBJETIVES: To evaluate G93A and D90A mutations in SOD1 gene and a short tandem repeat in C9orf72 within a cohort of amyotrophic lateral sclerosis patients from Antioquia, Colombia. Materials y methods: Thirty-four patients previously diagnosed with amyotrophic lateral sclerosis were included in the study. Peripheral blood samples were used for DNA extraction and genotyping. RESULTS: No mutations were found in SOD1 (G93A and D90A) in any of the patients, while C9orf72 exhibited an allele with a statistically significant high prevalence in the study sample (8 hexanucleotide repeats of CAGCAG). CONCLUSIONS: These results suggest an association between this short tandem repeat (STR) in C9orf72 and the presence of amyotrophic lateral sclerosis in the studied population. However, this association should be established in a larger sample size and with controls from the same population. In addition, there also seems to be a genetic anticipation effect for the disease regarding this locus, since patients with this genotype present an earlier onset.


Introducción. La esclerosis lateral amiotrófica es una enfermedad neurodegenerativa con un posible origen multifactorial, caracterizado por una degeneración progresiva de las neuronas motoras. Hay una gran prevalencia relativa de esta enfermedad en Antioquia; sin embargo, no hay publicaciones de estudios genéticos en Colombia. A pesar de su etiopatogénesis desconocida, hay varios factores de riesgo genético que se encuentran constantemente en el desarrollo de esta enfermedad. Objetivo. Evaluar las mutaciones G93A y D90A del gen SOD1 y una repetición corta en tándem (Short Tandem Repeat, STR) en el locus C9orf72, en una cohorte de pacientes con esclerosis lateral amiotrófica en Antioquia, Colombia. Materiales y métodos. Se incluyeron 34 pacientes previamente diagnosticados en el estudio. Una muestra de sangre periférica se usó para extraer el ADN y, posteriormente, genotipificarlo. Resultados. No se encontraron mutaciones en el gen SOD1 (G93A y D90A), mientras que el C9orf72 exhibe un alelo con una significativa prevalencia en los pacientes del estudio (8 repeticiones del hexanucleótido G4C2). Conclusiones. Se sugiere una asociación entre la repetición en tándem en C9orf72 y la presencia de la esclerosis lateral amiotrófica en la población estudiada. Sin embargo, se sugiere hacer estudios adicionales e incluir un grupo control de la misma población. Además, se detecta un fenómeno de anticipación genética de la enfermedad, dado que los pacientes con el alelo de 8 repeticiones en C9orf72 presentan una edad temprana de aparición de los síntomas.


Subject(s)
Amyotrophic Lateral Sclerosis , Neurodegenerative Diseases , Humans , Amyotrophic Lateral Sclerosis/epidemiology , Amyotrophic Lateral Sclerosis/genetics , Amyotrophic Lateral Sclerosis/pathology , C9orf72 Protein/genetics , Superoxide Dismutase-1/genetics , Colombia/epidemiology
2.
Zebrafish ; 17(4): 278-286, 2020 08.
Article in English | MEDLINE | ID: mdl-32716725

ABSTRACT

Pimelodidae has a high number of species, but cytogenetic studies are generally restricted to classical chromosomal characterization and in situ localization of ribosomal DNA (rDNA) genes. This study was developed to compare Pimelodus microstoma and Pimelodus pohli focusing on chromosomal diversification provided by the transposition of DNA sequences containing multigene families. Both species share 56 chromosomes, with centromeric and terminal heterochromatic blocks. The silver nucleolus organizer regions (Ag-NORs)/45S rDNA was located in the chromosome pair 24 for both species. The 5S rDNA sites were evidenced in the pair 8 of P. microstoma, and in the pairs 1, 17, and 18 in P. pohli. The U1 small nuclear RNA (snRNA) was located at terminal site in the first subtelocentric pair in both species. The U2 snRNA site was syntenic to 5S rDNA in non-homeologue chromosomes between analyzed species. The histones H3 and H4 were clustered in chromosome pairs 19 and 23 in P. microstoma, and 21 and 22 in P. pohli. Our study proposes that the movement of DNA sequences carrying multigene families has been driven on the chromosomal diversification of Pimelodidae. These multigene location in the genomes can explain most of the visualized chromosomal rearrangements in Pimelodidae and it is useful to understand the chromosomal changes and their distinctive karyotype formulae.


Subject(s)
Catfishes/genetics , Chromosome Mapping , Cytogenetic Analysis , Multigene Family , Animals , DNA, Ribosomal/genetics , Female , Male , Nucleolus Organizer Region/genetics , RNA, Small Nuclear/genetics
3.
J Homosex ; 67(3): 417-434, 2020.
Article in English | MEDLINE | ID: mdl-30372382

ABSTRACT

Our article tackles gender and sexual diversity scholarship in Colombia and Perú, two countries without institutionalized LGBT studies programs. By analyzing the impact of literary works in Perú and an annual conference in Colombia's capital, we show how LGBT-related scholarship (and activism) has been advanced in these Andean countries with tactful maneuvering, as they offset contemporary violence-and a strong religious influence. Our comparison allows us to showcase two of the most common ways through which these countries have engaged in LGBT research and activism. This region-centered, dual-country approach underscores the broader need of researching and documenting these efforts.


Subject(s)
Sexual and Gender Minorities , Colombia , Educational Status , Female , Humans , Male , Peru , Research
4.
Cytogenet Genome Res ; 158(2): 106-113, 2019.
Article in English | MEDLINE | ID: mdl-31203273

ABSTRACT

The karyotypes of the family Parodontidae consist of 2n = 54 chromosomes. The main chromosomal evolutionary changes of its species are attributed to chromosome rearrangements in repetitive DNA regions in their genomes. Physical mapping of the H1 and H4 histones was performed in 7 Parodontidae species to analyze the chromosome rearrangements involved in karyotype diversification in the group. In parallel, the observation of a partial sequence of an endogenous retrovirus (ERV) retrotransposon in the H1 histone sequence was evaluated to verify molecular co-option of the transposable elements (TEs) and to assess paralogous sequence dispersion in the karyotypes. Six of the studied species had an interstitial histone gene cluster in the short arm of the autosomal pair 13. Besides this interstitial cluster, in Apareiodon davisi, a probable further site was detected in the terminal region of the long arm in the same chromosome pair. The H1/H4 clusters in Parodon cf. pongoensis were located in the smallest chromosomes (pair 20). In addition, scattered H1 signals were observed on the chromosomes in all species. The H1 sequence showed an ERV in the open reading frame (ORF), and the scattered H1 signals on the chromosomes were attributed to the ERV's location. The H4 sequence had no similarity to the TEs and displayed no dispersed signals. Furthermore, the degeneration of the inner ERV in the H1 sequence (which overlapped a stretch of the H1 ORF) was discussed regarding the likelihood of molecular co-option of this retroelement in histone gene function in Parodontidae.


Subject(s)
Characiformes/genetics , Chromosome Mapping/veterinary , Histones/genetics , Animals , Characiformes/metabolism , Female , Fish Proteins/genetics , In Situ Hybridization, Fluorescence , Karyotyping , Male , Retroelements , Sequence Analysis, DNA/veterinary
5.
Int J Legal Med ; 133(5): 1385-1388, 2019 Sep.
Article in English | MEDLINE | ID: mdl-30612323

ABSTRACT

X-chromosomal markers can be useful in some forensic cases, where the analysis of the autosomal markers is not conclusive. In this study, a population sample of 500 unrelated individuals born in São Paulo State was characterized for 32 X-InDel markers. No deviations from the Hardy-Weinberg equilibrium were detected, except for MID1361. The 32 X-InDels showed an accumulated power of discrimination of 0.9999999999993 in females and 0.99999993 in males and an exclusion chance of 0.999996 in trios and 0.99995 in duos. São Paulo showed lower genetic distances to the Colombian admixed and European populations than to Native American, Asian, or African populations. Ancestry analysis revealed 41.8% European, 31.6% African, and 26.6% Native American contributions. Segregation analysis was performed in 101 trios, and the mutation rate was estimated to be low.


Subject(s)
Chromosomes, Human, X/genetics , Genetics, Population/methods , INDEL Mutation , American Indian or Alaska Native/genetics , Black People/genetics , Brazil/ethnology , Family , Female , Genetic Markers , Haplotypes , Humans , Male , Multiplex Polymerase Chain Reaction , Mutation Rate , Paternity , White People/genetics
6.
Neotrop. ichthyol ; 17(2): e190010, 2019. tab, graf
Article in English | LILACS, VETINDEX | ID: biblio-1012708

ABSTRACT

The transposable elements (TE) have been widely applied as physical chromosome markers. However, in Loricariidae there are few physical mapping analyses of these elements. Considering the importance of transposable elements for chromosomal evolution and genome organization, this study conducted the physical chromosome mapping of retroelements (RTEs) Rex1, Rex3 and Rex6 in seven species of the genus Harttia and four species of the genus Hypostomus, aiming to better understand the organization and dynamics of genomes of Loricariidae species. The results showed an intense accumulation of RTEs Rex1, Rex3 and Rex6 and dispersed distribution in heterochromatic and euchromatic regions in the genomes of the species studied here. The presence of retroelements in some chromosomal regions suggests their participation in various chromosomal rearrangements. In addition, the intense accumulation of three retroelements in all species of Harttia and Hypostomus, especially in euchromatic regions, can indicate the participation of these elements in the diversification and evolution of these species through the molecular domestication by genomes of hosts, with these sequences being a co-option for new functions.(AU)


Os elementos transponíveis (TE) têm sido amplamente aplicados como marcadores cromossômicos. Contudo, em Loricariidae, há poucas análises de mapeamento físico destes elementos. Considerando a importância de elementos transponíveis para a evolução cromossômica e organização genômica, este trabalho realizou o mapeamento físico cromossômico dos retroelementos (RTEs) Rex1, Rex3 e Rex6 em sete espécies do gênero Harttia e em quatro espécies do gênero Hypostomus, com o intuito de melhor compreender a organização e dinâmica dos genomas das espécies de Loricariidae. Os resultados evidenciaram um intenso acúmulo dos RTEs Rex1, Rex3 e Rex6 e distribuição dispersa em regiões heterocromáticas e eucromáticas no genoma das espécies estudadas. A presença de retroelementos em algumas regiões cromossômicas sugere sua participação em vários rearranjos cromossômicos. Além disso, o intenso acúmulo dos três retroelementos em todas as espécies de Harttia e Hypostomus, especialmente em regiões eucromáticas, pode indicar a participação destes elementos na diversificação e evolução destas espécies através da domesticação molecular pelo genoma dos hospedeiros, com estas sequências sendo co-optadas paras novas funções.(AU)


Subject(s)
Animals , Catfishes/genetics , Genes, pX/genetics , In Situ Hybridization/veterinary
7.
Ann Hum Biol ; 44(7): 659-662, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28831823

ABSTRACT

Short tandem repeats (STRs) are genetic markers largely employed in forensic analysis and paternity investigation cases. When an inconsistency between the parent and child is considered as a possible mutation, the mutation rate should be incorporated into paternity index calculations to give a robust result and to reduce the chance of misinterpretation. The aim of this study was to estimate the mutation rates of 20 autosomal STRs loci used for paternity tests. In these loci we analysed 29,831 parent-child allelic transfers from 929 duo or trio paternity tests carried out during 2012?2016 from São Paulo State, Brazil. We identified 35 mutations in 16 loci, and they were more frequent in the paternal germline compared to the maternal germline. The loci with the highest rate were vWA and FGA and the ones with the lowest rate were PENTA E, PENTA D, D21S11, D7S820 and D6S1043. We did not identified any mutation in D2S1338, TH01, TPOX and D16S539 loci. All mutations consisted of losses or gains of one repeat unit. Mutation rates found in the São Paulo population have peculiarities, which justifies the use of regional databases in laboratories.


Subject(s)
Maternal Age , Microsatellite Repeats/genetics , Mutation Rate , Paternal Age , Paternity , Brazil , Humans
8.
Biochemistry ; 56(24): 3150-3157, 2017 06 20.
Article in English | MEDLINE | ID: mdl-28516783

ABSTRACT

The glucokinase regulatory protein (GKRP) plays an essential role in glucose homeostasis by acting as a competitive inhibitor of glucokinase (GCK) and triggering its localization to the hepatocyte nucleus upon glucose deprivation. Metabolites such as fructose 6-phosphate and sorbitol 6-phosphate promote assembly of the GCK-GKRP complex, whereas fructose 1-phosphate and functionalized piperazines with potent in vivo antidiabetic activity disrupt the complex. Here, we establish the molecular basis by which these natural and synthetic ligands modulate the GCK-GKRP interaction. We demonstrate that a small-molecule disruptor of the protein-protein interaction utilizes a two-step conformational selection mechanism to associate with a rare GKRP conformation constituting 3% of the total population. Conformational heterogeneity of GKRP is localized to the N-terminus and deleting this region eliminates the ability of sorbitol 6-phosphate to promote the GCK-GKRP interaction. Stabilizing ligands favor an extended N-terminus, which sterically positions two arginine residues for optimal Coulombic interaction with a pair of carboxylate side chains from GCK. Conversely, disruptors promote a more compact N-terminus in which an interfacial arginine residue is stabilized in an unproductive orientation through a cation-π interaction with tyrosine 75. Eliminating the ability to sample this binding impaired conformation enhances the intrinsic inhibitory activity of GKRP. Elucidating the molecular basis of ligand-mediated control over the GCK-GKRP interaction is expected to impact the development and future refinement of therapeutic agents for diabetes and cardiovascular disease, which result from improper GKRP regulation of GCK.


Subject(s)
Adaptor Proteins, Signal Transducing/antagonists & inhibitors , Adaptor Proteins, Signal Transducing/chemistry , Glucokinase/antagonists & inhibitors , Hypoglycemic Agents/pharmacology , Adaptor Proteins, Signal Transducing/metabolism , Dose-Response Relationship, Drug , Glucokinase/metabolism , Humans , Hypoglycemic Agents/chemistry , Ligands , Models, Molecular , Molecular Structure , Protein Binding/drug effects , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Structure-Activity Relationship
9.
Arq Bras Cardiol ; 108(4): 315-322, 2017 Apr.
Article in English, Portuguese | MEDLINE | ID: mdl-28538761

ABSTRACT

BACKGROUND:: The practice of exercise in short bouts repeated throughout the day may be an alternative strategy to lift people out of physical inactivity. OBJECTIVE:: to evaluate if accumulated exercise, as occurs in continuous exercise training, improve endothelial function in rat aorta. METHODS:: Wistar male rats were divided into three groups: continuous exercise (CEx, 1 hour on the treadmill) or accumulated exercise (AEx, 4 bouts of 15 minutes / day) for 5 days/week for 8 weeks, or sedentary (SED). During the training period, body weight gain and increase in exercise performance were recorded. On sacrifice day, aorta was dissected into rings (3-5 mm) and mounted on the organ bath. RESULTS:: Fitness was significantly greater in CEx and AEx rats as compared with SED animals. In addition, compared with the SED group, CEx animals had a lower body mass gain, and the aorta obtained from these animals had reduced contractile response to norepinephrine and greater acetylcholine-induced relaxation. These results were not observed in ACEx animals. CONCLUSIONS:: Both CEx and AEx improved fitness, but only CEx led to reduced body weight gain and improved endothelial function. FUNDAMENTO:: A prática de exercícios em sessões curtas que se repetem ao longo do dia pode ser uma alternativa para tirar as pessoas da inatividade física. OBJETIVO:: Verificar se o exercício acumulado, tal como ocorre com o treinamento com exercício contínuo, melhora a função endotelial na aorta de ratos. MÉTODOS:: Ratos Wistar machos foram divididos em 3 grupos: treinamento com exercício contínuo (ExC; 1 hora em esteira) ou com exercício acumulado (ExA; 4 sessões de 15 minutos ao longo do dia) por 5 dias/semana, durante 8 semanas, ou grupo sedentário (SED). Durante o treinamento, foram registrados o ganho de peso corporal e desempenho na esteira. No dia do sacrifício, anéis (3-5 mm) da aorta foram obtidos e montados em banho de órgãos. RESULTADOS:: Animais ExC e ExA mostraram aptidão física significativamente maior em comparação com os SED. Paralelamente, em comparação com SED, animais ExC tiveram menor ganho de massa corporal, e aortas retiradas desses animais mostraram respostas contrácteis à noradrenalina reduzidas e maior relaxamento induzido pela acetilcolina. Esses resultados não foram observados no grupo ExA. CONCLUSÕES:: Tanto o ExC quanto o ExA melhoraram a aptidão física, mas somente o ExC foi capaz de reduzir o ganho de peso corporal dos animais e melhorar a função endotelial.


Subject(s)
Aorta/physiology , Endothelium, Vascular/physiology , Physical Conditioning, Animal/methods , Physical Fitness/physiology , Acetylcholine/pharmacology , Animals , Aorta/drug effects , Endothelium, Vascular/drug effects , Male , Models, Animal , Norepinephrine/pharmacology , Physical Conditioning, Animal/physiology , Random Allocation , Rats, Wistar , Thiobarbituric Acid Reactive Substances/analysis , Vasoconstrictor Agents/pharmacology , Weight Loss/physiology
10.
Int J Legal Med ; 131(6): 1523-1530, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28405752

ABSTRACT

Studies with X-STR loci show population genetic substructure, which makes necessary the characterization of such markers in the different geographical and/or ethnic populations. Therefore, this study assessed the distribution and forensic efficiency of an X-STR decaplex system in the population of the State of Mato Grosso, as well as analysed the population structure of this State based on the aforementioned system. All X-STR markers were in Hardy-Weinberg equilibrium and linkage equilibrium, and the DXS6809 was the most informative marker. The power of discrimination value in females and males was 0.99999999995 and 0.9999994, respectively. Analysis of molecular variance indicated 1.10% (p < 0.00001) of heterogeneity among Europeans, Africans, Brazilians and other Latin Americans, and in relation to such groups, the population of the State of Mato Grosso showed lower genetic variation when compared with the Brazilian group (-0.10%, p = 0.67327). The genetic distance analysis showed lower values of F ST (0.0004 ≤ F ST ≤ 0.00331), with non-significant p value (p > 0.00024), between the populations of Mato Grosso and Mato Grosso do Sul, Paraná and the Southeast region of Brazil (except for one sample of Rio de Janeiro). F ST values with significant p values (p ≤ 0.00024) were obtained between the population of Mato Grosso and Iberian, African and some Latin American populations. The X-STR decaplex system proved to be extremely useful in the population of the State of Mato Grosso, and the data obtained does not show the need for a specific forensic database for this State in relation to the Brazilian populations compared in this study, except for population of Rio de Janeiro.


Subject(s)
Chromosomes, Human, X , DNA Fingerprinting/instrumentation , Genetics, Population , Tandem Repeat Sequences , Brazil , Female , Gene Frequency , Genetic Variation , Genotype , Humans , Male , Polymerase Chain Reaction , Racial Groups/genetics
11.
Arq. bras. cardiol ; 108(4): 315-322, Apr. 2017. graf
Article in English | LILACS | ID: biblio-838719

ABSTRACT

Abstract Background: The practice of exercise in short bouts repeated throughout the day may be an alternative strategy to lift people out of physical inactivity. Objective: to evaluate if accumulated exercise, as occurs in continuous exercise training, improve endothelial function in rat aorta. Methods: Wistar male rats were divided into three groups: continuous exercise (CEx, 1 hour on the treadmill) or accumulated exercise (AEx, 4 bouts of 15 minutes / day) for 5 days/week for 8 weeks, or sedentary (SED). During the training period, body weight gain and increase in exercise performance were recorded. On sacrifice day, aorta was dissected into rings (3-5 mm) and mounted on the organ bath. Results: Fitness was significantly greater in CEx and AEx rats as compared with SED animals. In addition, compared with the SED group, CEx animals had a lower body mass gain, and the aorta obtained from these animals had reduced contractile response to norepinephrine and greater acetylcholine-induced relaxation. These results were not observed in ACEx animals. Conclusions: Both CEx and AEx improved fitness, but only CEx led to reduced body weight gain and improved endothelial function.


Resumo Fundamento: A prática de exercícios em sessões curtas que se repetem ao longo do dia pode ser uma alternativa para tirar as pessoas da inatividade física. Objetivo: Verificar se o exercício acumulado, tal como ocorre com o treinamento com exercício contínuo, melhora a função endotelial na aorta de ratos. Métodos: Ratos Wistar machos foram divididos em 3 grupos: treinamento com exercício contínuo (ExC; 1 hora em esteira) ou com exercício acumulado (ExA; 4 sessões de 15 minutos ao longo do dia) por 5 dias/semana, durante 8 semanas, ou grupo sedentário (SED). Durante o treinamento, foram registrados o ganho de peso corporal e desempenho na esteira. No dia do sacrifício, anéis (3-5 mm) da aorta foram obtidos e montados em banho de órgãos. Resultados: Animais ExC e ExA mostraram aptidão física significativamente maior em comparação com os SED. Paralelamente, em comparação com SED, animais ExC tiveram menor ganho de massa corporal, e aortas retiradas desses animais mostraram respostas contrácteis à noradrenalina reduzidas e maior relaxamento induzido pela acetilcolina. Esses resultados não foram observados no grupo ExA. Conclusões: Tanto o ExC quanto o ExA melhoraram a aptidão física, mas somente o ExC foi capaz de reduzir o ganho de peso corporal dos animais e melhorar a função endotelial.


Subject(s)
Animals , Male , Aorta/physiology , Physical Conditioning, Animal/methods , Endothelium, Vascular/physiology , Physical Fitness/physiology , Aorta/drug effects , Physical Conditioning, Animal/physiology , Vasoconstrictor Agents/pharmacology , Endothelium, Vascular/drug effects , Weight Loss/physiology , Acetylcholine/pharmacology , Random Allocation , Norepinephrine/pharmacology , Thiobarbituric Acid Reactive Substances/analysis , Rats, Wistar , Models, Animal
12.
Zebrafish ; 14(2): 169-176, 2017 04.
Article in English | MEDLINE | ID: mdl-28060676

ABSTRACT

Most species of the genus Harttia inhabits the headwaters of small tributaries, but some species are restricted to the main channel of some rivers. This feature, combined with limited dispersal ability, leads to the formation of small isolated populations with reduced gene flow. Currently, there are 23 taxonomically defined and recognized species, and 17 of these are found in Brazil, distributed in several hydrographic basins. Despite this diversity, few chromosomal data for the species belonging to this genus are found in the literature. Thus, this study analyzed, by classical and molecular cytogenetics methodologies, the chromosomal diversity of this genus, to discuss the processes that are involved in the evolution and karyotype differentiation of the species of the group. Seven species of Harttia were analyzed: H. kronei, H. longipinna, H. gracilis, H. punctata, H. loricariformis, H. torrenticola, and H. carvalhoi. The chromosomal diversity found in these species includes different diploid and fundamental numbers, distinct distribution of several repetitive sequences, the presence of supernumerary chromosomes in H. longipinna and multiple sex chromosome systems of the type XX/XY1Y2 in H. carvalhoi and X1X1X2X2/X1X2Y in H. punctata. Lastly, our data highlight the genus Harttia as an excellent model for evolutionary studies.


Subject(s)
Biological Evolution , Catfishes/genetics , Genetic Variation , Karyotype , Animals , Carrier Proteins , Cytoskeletal Proteins , Female , Intracellular Signaling Peptides and Proteins , Male , Sex Chromosomes , Species Specificity
13.
Placenta ; 49: 33-36, 2017 01.
Article in English | MEDLINE | ID: mdl-28012452

ABSTRACT

INTRODUCTION: Expression of HLA-E molecule in the placental extravillous trophoblast is associated with immune system cell inhibition, resulting in immune tolerance to fetus during pregnancy. HIV-1 can infect trophoblast cells and modify the expression of HLA-E, which may inhibit the cytotoxic activity of the immune system. AIM: The aim of this study was to evaluate HLA-E expression in third trimester placental tissue of women infected with HIV-1 and uninfected women. METHODS: We performed an immunohistochemistry assay to evaluate HLA-E staining in the placental tissue of 99 HIV-1 infected and 85 uninfected women. A pathologist analyzed and classified the HLA-E expression in the placental cells. RESULTS: Irrespective of the HIV status, HLA-E staining was observed in the extravillous trophoblast cells, endothelial cells and Hofbauer cells, but not in the syncytiotrophoblast. HLA-E staining showed no significant difference between the placental tissue of women infected with HIV-1 and uninfected women (P = 0.76). Considering HIV-1 infected women, HLA-E staining was not influenced by HIV-1 viral load (P = 0.48), CD4+ T-cell count (P = 0.10) and antiretroviral therapy used during pregnancy (P = 0.54). DISCUSSION: Despite the presence of HIV-1 infection, the expression of HLA-E molecules in the placental tissue was not modified when the infection was under antiretroviral therapy control.


Subject(s)
HIV Infections/metabolism , Histocompatibility Antigens Class I/metabolism , Placenta/metabolism , Adolescent , Adult , Female , HIV-1 , Humans , Pregnancy , Pregnancy Trimester, Third , Trophoblasts/metabolism , Young Adult , HLA-E Antigens
14.
Cytogenet Genome Res ; 149(3): 191-200, 2016.
Article in English | MEDLINE | ID: mdl-27522524

ABSTRACT

Chromosomal characteristics of Hoplerythrinus unitaeniatus populations from 5 Brazilian river basins, namely Arinos (Amazonas basin), Araguaia, Paraguai, Alto Paraná, and São Francisco were analyzed by conventional Giemsa staining, C-banding, silver nitrate impregnation, and fluorescence in situ hybridization (FISH) with 18S and 5S rDNA and telomeric sequence (TTAGGG)n probes. The diploid chromosome number was 2n = 48 in representatives of the populations from Paraguai and Alto Paraná River basins and 2n = 52 for those from the Arinos and Araguaia River basins. The São Francisco population had individuals with 2n = 50 and 52 occurring in sympatry. C-banding showed heterochromatic blocks mainly located at interstitial and pericentromeric positions in most of the chromosomes. Silver nitrate impregnation demonstrated simple NORs for representatives from Arinos and Araguaia River populations and multiple NORs for specimens from Paraguai, Alto Paraná, and São Francisco River populations. FISH with 18S and 5S rDNA probes revealed many chromosomes carrying these cistrons, with up to 21 chromosomes bearing 18S rDNA sites (Alto Rio Paraná basin) and up to 12 chromosomes with 5S rDNA sites (Paraguai basin), besides the occurrence of colocalization in all populations. FISH with telomeric sequence (TTAGGG)n detected sites in the terminal portion of the chromosomes in all populations. These data reinforce the idea that H. unitaeniatus is a species complex. Evolutionary and biogeographical aspects of the group in the Neotropical region are discussed.


Subject(s)
Characiformes/genetics , Cytogenetic Analysis , Rivers , Animals , Azure Stains , Base Sequence , Brazil , Chromosome Banding , Chromosomes/genetics , DNA, Ribosomal/genetics , Evolution, Molecular , Female , In Situ Hybridization, Fluorescence , Karyotype , Male , RNA, Ribosomal, 18S/genetics , RNA, Ribosomal, 5S/genetics , Telomere/genetics
15.
Medicina (Ribeiräo Preto) ; 49(1): 80-85, jan.-fev. 2016.
Article in Portuguese | LILACS | ID: lil-790216

ABSTRACT

A transmissão vertical (TV) consiste na principal forma de infecção pelo HIV-1 em menores de 13 anos e estimativas apontam que em 25% dos casos a transmissão tenha ocorrido intraútero. Nessas circunstâncias, o vírus de alguma forma ultrapassa a membrana placentária e chega ao sangue fetal. Esta revisão tem como objetivo realizar uma breve descrição sobre os mecanismos presentes na placenta humana que são capazes de gerar susceptibilidade ou proteção à TV do HIV-1. As células placentárias produzem um enorme grupo de citocinas, quimiocinas, hormônios e receptores que podem contribuir com o desfecho da transmissão do vírus ao concepto. Além disso, a capacidade do vírus de infectar as células placentárias também pode contribuir com a sua transmissão. Entretanto, o mecanismo pelo qual o vírus é capaz de sobrepujar a membrana placentária e as consequências dessa infecção no tecido placentário não estão totalmente elucidados. Dessa forma, novas pesquisas nessa área poderão contribuir com o desenvolvimento de estratégias profiláticas eficazes para redução da TV do HIV-1.


Vertical transmission (VT) is the main form of infection by HIV-1 in children under 13 years and estimates show that in 25% of cases intrauterine transmission has occurred. Under these circumstances, the virus somehow overcomes the placental membrane and reaches the fetal blood. This review aims to conduct a brief description of the mechanisms present in human placenta that are capable of generating susceptibility or resistance to VT of HIV-1. Placental cells produces a huge group of cytokines, chemokines, hormones and receptors that may contribute to the outcome of virus transmission to the fetus. Moreover, the ability of the virus to infect placental cells can also contribute to its transmission. However, the mechanism by which the virus is able to overcome the placental tissue is not fully elucidated. Thus, further research in this area may contribute to the development of effective preventive strategies to reduce the VT of HIV-1.


Subject(s)
HIV-1 , Placenta , Infectious Disease Transmission, Vertical
16.
Zebrafish ; 13(1): 19-25, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26625282

ABSTRACT

This study analyzed two Apareiodon species without available chromosome data: Apareiodon argenteus and Apareiodon davisi. Both species have 54 metacentric/submetacentric chromosomes, with centromeric blocks of heterochromatin. Nucleolus organizer regions were active in chromosome pair 2 in A. argenteus and pairs 4 and 9 in A. davisi. In A. argenteus, 45S and 5S ribosomal genes were located in chromosome pairs 2 and 18, respectively. Polymorphisms were observed in these ribosomal sequences in A. davisi, with variations in the number/position of sites, and colocalization of these genes in some chromosome pairs. The WAp repetitive fraction was dispersed along the chromosomes of the two species. The satellite DNA pPh2004 was identified in chromosome pairs 7, 8, 10, 11, and 18 in A. argenteus and in pair 24 in A. davisi. The present study describes the first case of chromosomal polymorphisms involving two ribosomal sequences in Parodontidae and discusses the role of repetitive DNAs in the genome and karyotype diversity of this family.


Subject(s)
Characiformes/genetics , Chromosomes/genetics , DNA, Ribosomal/genetics , Polymorphism, Genetic , Animals , Female , Karyotype , Male
17.
Zebrafish ; 12(4): 281-7, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26102558

ABSTRACT

In this study, 43 specimens of Hoplerythrinus unitaeniatus from the São Francisco River basin were chromosomally analyzed by conventional Giemsa staining, C-banding, silver nitrate impregnation, and fluorescence in situ hybridization (FISH) with probes of 5S and 18S rDNA. The diploid numbers found were 50 and 52 chromosomes, showing the existence of two well-defined biological entities in sympatry. Specimens with 51 chromosomes, which showed three distinct karyotypic forms, were also found and are characterized as natural hybrids due to the correspondence with the chromosomes of the specimens with 50 and 52 chromosomes. By FISH using 5S and 18S rDNA probes, it was possible to detect specific chromosomal markers for the specimens with 50 and 52 chromosomes, as well as the occurrence of common sites in both. The specimens with 51 chromosomes showed intermediate patterns for these markers, reinforcing the hypothesis that these are actual natural hybrids. A review and new classification for the karyomorphs of H. unitaeniatus have also been proposed.


Subject(s)
Characiformes/genetics , Hybridization, Genetic , Polymorphism, Genetic , Animals , Brazil , Female , In Situ Hybridization, Fluorescence , Karyotype , Male , RNA, Ribosomal, 18S/genetics , RNA, Ribosomal, 5S/genetics , Sympatry
18.
Eur J Hum Genet ; 23(7): 907-14, 2015 Jul.
Article in English | MEDLINE | ID: mdl-25271085

ABSTRACT

Craniosynostosis, caused by the premature fusion of one or more of the cranial sutures, can be classified into non-syndromic or syndromic and by which sutures are affected. Clinical assignment is a difficult challenge due to the high phenotypic variability observed between syndromes. During routine diagnostics, we screened 182 Spanish craniosynostosis probands, implementing a four-tiered cascade screening of FGFR2, FGFR3, FGFR1, TWIST1 and EFNB1. A total of 43 variants, eight novel, were identified in 113 (62%) patients: 104 (92%) detected in level 1; eight (7%) in level 2 and one (1%) in level 3. We subsequently screened additional genes in the probands with no detected mutation: one duplication of the IHH regulatory region was identified in a patient with craniosynostosis Philadelphia type and five variants, four novel, were identified in the recently described TCF12, in probands with coronal or multisuture affectation. In the 19 Saethre-Chotzen syndrome (SCS) individuals in whom a variant was detected, 15 (79%) carried a TWIST1 variant, whereas four (21%) had a TCF12 variant. Thus, we propose that TCF12 screening should be included for TWIST1 negative SCS patients and in patients where the coronal suture is affected. In summary, a molecular diagnosis was obtained in a total of 119/182 patients (65%), allowing the correct craniosynostosis syndrome classification, aiding genetic counselling and in some cases provided a better planning on how and when surgical intervention should take place and, subsequently the appropriate clinical follow up.


Subject(s)
Basic Helix-Loop-Helix Transcription Factors/genetics , Craniosynostoses/genetics , Genetic Predisposition to Disease/genetics , Mutation , Cohort Studies , Craniosynostoses/diagnosis , DNA Mutational Analysis , Ephrin-B1/genetics , Family Health , Female , Genetic Testing/methods , HEK293 Cells , Humans , Male , Nuclear Proteins/genetics , Pedigree , Receptor, Fibroblast Growth Factor, Type 1/genetics , Receptor, Fibroblast Growth Factor, Type 2/genetics , Receptor, Fibroblast Growth Factor, Type 3/genetics , Reproducibility of Results , Sensitivity and Specificity , Spain , Twist-Related Protein 1/genetics
19.
Ciênc. cuid. saúde ; 13(3): 9, 2014-10-23.
Article in Portuguese | LILACS-Express | LILACS | ID: biblio-1122014

ABSTRACT

Várias são as razões para a ocorrência das infecções relacionadas à assistência à saúde e suas consequências influenciam no tempo de tratamento e prognóstico do paciente. Sendo a higienização das mãos um método eficiente e econômico para prevenir a transmissão de microorganismos, este estudo objetivou identificar o conhecimento de estudantes da área de saúde da Universidade Federal de São Carlos (UFSCar) sobre a higienização das mãos, dentro do conceito de segurança do paciente. Utilizando uma abordagem quantitativa, foram aplicados 222 questionários estruturados aos alunos de enfermagem, fisioterapia, medicina e terapia ocupacional, sendo os dados analisados a partir da estatística descritiva. No total de acertos do questionário todos os cursos atingiram pontuação maior que 75%. As fragilidades no conhecimento identificadas relacionavam-se à higienização das mãos como um método de proteção à aquisição de infecções; ao uso e recomendação adequada do álcool a 70% e de soluções degermantes; e à não recomendação do uso de secadores elétricos. Observou-se que os graduandos consolidaram conhecimentos básicos sobre a temáticadurante a graduação. Entretanto, as fragilidades encontradas podem comprometer a segurança do paciente e do profissional, sendo necessária maior abordagem sobre essa temática durante a formação acadêmica


There are several reasons for the occurrence of infections related to health assistance and its consequences influences the time of treatment and prognosis of the patient. Being the hand hygiene an efficient and economical method to prevent transmission of microorganisms, this study aimed to identify the knowledge of health care students of the Federal University of São Carlos (UFSCar) about hand hygiene,within the concept of patient's safety. Using a quantitative approach method, it was applied 222 structured guides to students of nursing, physiotherapy, occupational therapy and medicine, being the data analyzed using descriptive statistics. From the total of correct answers of the guide, all courses have achieved a score greater than 75%. The fragilities identified in knowledge related to: hand hygiene as a method of protection against acquisition of infections; the use and recommendation of 70% alcohol and detergents formulations; and the recommendation for not using electric dryers. It was observed that the students consolidated basic knowledge on the subject during graduation. However, those fragilities could compromise the security of the patient and professional, being necessary a greater approach on this subject during the academic education.

20.
Protein Sci ; 23(7): 915-22, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24723372

ABSTRACT

Glucokinase (GCK, hexokinase IV) is a monomeric enzyme with a single glucose binding site that displays steady-state kinetic cooperativity, a functional characteristic that affords allosteric regulation of GCK activity. Structural evidence suggests that connecting loop I, comprised of residues 47-71, facilitates cooperativity by dictating the rate and scope of motions between the large and small domains of GCK. Here we investigate the impact of varying the length and amino acid sequence of connecting loop I upon GCK cooperativity. We find that sequential, single amino acid deletions from the C-terminus of connecting loop I cause systematic decreases in cooperativity. Deleting up to two loop residues leaves the kcat value unchanged; however, removing three or more residues reduces kcat by 1000-fold. In contrast, the glucose K0.5 and KD values are unaffected by shortening the connecting loop by up to six residues. Substituting alanine or glycine for proline-66, which adopts a cis conformation in some GCK crystal structures, does not alter cooperativity, indicating that cis/trans isomerization of this loop residue does not govern slow conformational reorganizations linked to hysteresis. Replacing connecting loop I with the corresponding loop sequence from the catalytic domain of the noncooperative isozyme human hexokinase I (HK-I) eliminates cooperativity without impacting the kcat and glucose K0.5 values. Our results indicate that catalytic turnover requires a minimal length of connecting loop I, whereas the loop has little impact upon the binding affinity of GCK for glucose. We propose a model in which the primary structure of connecting loop I affects cooperativity by influencing conformational dynamics, without altering the equilibrium distribution of GCK conformations.


Subject(s)
Catalytic Domain , Glucokinase/chemistry , Glucokinase/metabolism , Allosteric Regulation , Amino Acid Motifs , Catalysis , Glucokinase/genetics , Hexokinase/chemistry , Humans , Kinetics , Models, Molecular , Mutation , Protein Conformation , Protein Structure, Secondary , Protein Structure, Tertiary
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