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1.
G3 (Bethesda) ; 14(3)2024 Mar 06.
Article in English | MEDLINE | ID: mdl-38096217

ABSTRACT

The genus Acacia is a large group of woody legumes containing an enormous amount of morphological diversity in leaf shape. This diversity is at least in part the result of an innovation in leaf development where many Acacia species are capable of developing leaves of both bifacial and unifacial morphologies. While not unique in the plant kingdom, unifaciality is most commonly associated with monocots, and its developmental genetic mechanisms have yet to be explored beyond this group. In this study, we identify an accession of Acacia crassicarpa with high regeneration rates and isolate a clone for genome sequencing. We generate a chromosome-level assembly of this readily transformable clone, and using comparative analyses, confirm a whole-genome duplication unique to Caesalpinoid legumes. This resource will be important for future work examining genome evolution in legumes and the unique developmental genetic mechanisms underlying unifacial morphogenesis in Acacia.


Subject(s)
Acacia , Animals , Acacia/genetics , Comb and Wattles , Base Sequence , Chromosomes
2.
G3 (Bethesda) ; 12(7)2022 07 06.
Article in English | MEDLINE | ID: mdl-35639673

ABSTRACT

Here, we report the discovery of a novel Sediminibacterium sequenced from laboratory cultures of freshwater stream cyanobacteria from sites in Southern California, grown in BG11 medium. Our genome-wide analyses reveal a highly contiguous and complete genome (97% BUSCO) that is placed within sediminibacterial clades in phylogenomic analyses. Functional annotation indicates the presence of genes that could be involved in mutualistic/commensal relationship with associated cyanobacterial hosts.


Subject(s)
Cyanobacteria , Rivers , Cyanobacteria/genetics , Fresh Water/microbiology , Genome-Wide Association Study , Phylogeny
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