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1.
Respir Care ; 2024 Jun 25.
Article in English | MEDLINE | ID: mdl-38918025

ABSTRACT

BACKGROUND: Pulmonary function tests (PFTs) have historically used race-specific prediction equations. The recent American Thoracic Society guidelines recommend the use of a race-neutral approach in prediction equations. There are limited studies centering the opinions of practicing pulmonologists on the use of race in spirometry. Provider opinion will impact adoption of the new guideline. The aim of this study was to ascertain the beliefs of academic pulmonary and critical care providers regarding the use of race as a variable in spirometry prediction equations. METHODS: We report data from 151 open-ended responses from a voluntary, nationwide survey (distributed by the Association of Pulmonary Critical Care Medicine Program Directors) of academic pulmonary and critical care providers regarding the use of race in PFT prediction equations. Responses were coded using inductive and deductive methods, and a thematic content analysis was conducted. RESULTS: There was a balanced distribution of opinions among respondents supporting, opposing, or being unsure about the incorporation of race in spirometry prediction equations. Responses demonstrated a wide array of understanding related to the concept and definition of race and its relationship to physiology. CONCLUSIONS: There was no consensus among providers regarding the use of race in spirometry prediction equations. Concepts of race having biologic implications persist among pulmonary providers and will likely affect the uptake of the Global Lung Function Initiative per the American Thoracic Society guidelines.

3.
J Appl Lab Med ; 7(2): 421-436, 2022 03 02.
Article in English | MEDLINE | ID: mdl-34499739

ABSTRACT

BACKGROUND: Liver-type fatty acid-binding protein (L-FABP) is a promising biomarker for the early prediction of acute kidney injury (AKI). However, the clinical utility of L-FABP in different populations or settings remains unclear. We present a meta-analysis of studies evaluating the performance of L-FABP in AKI prediction. METHODS: We performed a literature search in MEDLINE, EMBASE, and Cochrane library, using search terms "acute kidney injury" and "L-FABP." Studies investigating the performance characteristics of L-FABP for the early diagnosis of AKI were included. Data about patient characteristics, diagnostic criteria of AKI, quantitative data required for construction of a 2 × 2 table (number of participants, sensitivity, specificity, and case number), study settings, and outcomes were extracted. The bivariable model was applied to calculate the estimated sensitivity and specificity of L-FABP. A summary ROC curve was created by plotting the true-positive rate against the false-positive rate at various cutoff values from different studies. RESULTS: We found 27 studies reporting measurement of urine (n = 25 studies) or plasma (n = 2 studies) L-FABP. Overall, the estimated sensitivity was 0.74 (95% CI: 0.69-0.80) and specificity was 0.78 (95% CI: 0.71-0.83). L-FABP demonstrated a stable area under the ROC of 0.82 (95% CI: 0.79-0.85) in variable clinical settings including intensive care unit, surgery, and contrast-induced AKI. In subgroup analysis excluding pediatric and post radiocontrast exposure cohorts, L-FABP had comparative diagnostic performance with neutrophil gelatinase associated lipocalin (NGAL). CONCLUSIONS: Despite broad prevalence, L-FABP is a clinically useful marker with moderate accuracy in variable clinical settings as demonstrated in our subgroup analysis. Except for pediatric patients and those post-radiocontrast exposure, L-FABP has comparable discriminative capability as NGAL.


Subject(s)
Acute Kidney Injury , Acute Kidney Injury/diagnosis , Acute Kidney Injury/metabolism , Biomarkers , Child , Fatty Acid-Binding Proteins , Female , Humans , Lipocalin-2 , Liver/metabolism , Male , ROC Curve
4.
Front Neurosci ; 15: 654957, 2021.
Article in English | MEDLINE | ID: mdl-34504411

ABSTRACT

Functional magnetic resonance imaging for presurgical brain mapping enables neurosurgeons to identify viable tissue near a site of operable pathology which might be at risk of surgery-induced damage. However, focal brain pathology (e.g., tumors) may selectively disrupt neurovascular coupling while leaving the underlying neurons functionally intact. Such neurovascular uncoupling can result in false negatives on brain activation maps thereby compromising their use for surgical planning. One way to detect potential neurovascular uncoupling is to map cerebrovascular reactivity using either an active breath-hold challenge or a passive resting-state scan. The equivalence of these two methods has yet to be fully established, especially at a voxel level of resolution. To quantitatively compare breath-hold and resting-state maps of cerebrovascular reactivity, we first identified threshold settings that optimized coverage of gray matter while minimizing false responses in white matter. When so optimized, the resting-state metric had moderately better gray matter coverage and specificity. We then assessed the spatial correspondence between the two metrics within cortical gray matter, again, across a wide range of thresholds. Optimal spatial correspondence was strongly dependent on threshold settings which if improperly set tended to produce statistically biased maps. When optimized, the two CVR maps did have moderately good correspondence with each other (mean accuracy of 73.6%). Our results show that while the breath-hold and resting-state maps may appear qualitatively similar they are not quantitatively identical at a voxel level of resolution.

5.
Nutr Clin Pract ; 33(2): 286-294, 2018 Apr.
Article in English | MEDLINE | ID: mdl-29658186

ABSTRACT

This clinical observation describes the enteral nutrition (EN) management of 2 toddlers at high nutrition risk due to cystic fibrosis (CF), exocrine pancreatic insufficiency, and comorbid medical conditions. The first case report describes a boy with severe malabsorption after intestinal resection. The second case report reviews a boy with CF and neuroblastoma. When pancreatic enzyme replacement therapy with EN was not effective or appropriate, use of an in-line digestive cartridge was initiated. While using the digestive cartridge, both children showed improvements in their anthropometric measures. This observation reviews the nutrition management throughout their clinical course and describes the use of a digestive cartridge with EN.


Subject(s)
Child Nutritional Physiological Phenomena , Cystic Fibrosis/therapy , Enteral Nutrition/instrumentation , Exocrine Pancreatic Insufficiency/therapy , Lipolysis , Malabsorption Syndromes/etiology , Malnutrition/prevention & control , Child, Preschool , Cystic Fibrosis/complications , Cystic Fibrosis/physiopathology , Digestion , Enzymes, Immobilized/chemistry , Enzymes, Immobilized/metabolism , Enzymes, Immobilized/therapeutic use , Exocrine Pancreatic Insufficiency/complications , Exocrine Pancreatic Insufficiency/physiopathology , Growth Charts , Humans , Malabsorption Syndromes/physiopathology , Male , Malnutrition/etiology , Microspheres , Neuroblastoma/complications , Pancrelipase/chemistry , Pancrelipase/metabolism , Pancrelipase/therapeutic use , Severity of Illness Index , Steatorrhea/etiology , Steatorrhea/prevention & control , Treatment Outcome , Weight Gain
6.
Anesth Essays Res ; 7(3): 402-4, 2013.
Article in English | MEDLINE | ID: mdl-25885993

ABSTRACT

Difficulties arising during tracheostomy tube insertion can be rapidly fatal if the airway is not adequately controlled. We report a case of difficult tracheostomy in a gentleman with severe subcutaneous emphysema following a previously failed tracheostomy attempt. Tracheostomy tube insertion through the pre-existing stoma failed repeatedly due to rapidly increasing distance of trachea from the skin and unexpected false passages; however, the trachea was eventually cannulated using a regular endotracheal tube.

7.
Genes Dev ; 17(6): 786-99, 2003 Mar 15.
Article in English | MEDLINE | ID: mdl-12651896

ABSTRACT

Initiation factor 3 (eIF3) forms a multifactor complex (MFC) with eIF1, eIF2, and eIF5 that stimulates Met-tRNA(i)(Met) binding to 40S ribosomes and promotes scanning or AUG recognition. We have previously characterized MFC subcomplexes produced in vivo from affinity-tagged eIF3 subunits lacking discrete binding domains for other MFC components. Here we asked whether these subcomplexes can bind to 40S ribosomes in vivo. We found that the N- and C-terminal domains of NIP1/eIF3c, the N- and C-terminal domains of TIF32/eIF3a, and eIF5 have critical functions in 40S binding, with eIF5 and the TIF32-CTD performing redundant functions. The TIF32-CTD interacted in vitro with helices 16-18 of domain I in 18S rRNA, and the TIF32-NTD and NIP1 interacted with 40S protein RPS0A. These results suggest that eIF3 binds to the solvent side of the 40S subunit in a way that provides access to the interface side for the two eIF3 segments (NIP1-NTD and TIF32-CTD) that interact with eIF1, eIF5, and the eIF2/GTP/Met-tRNA(i)(Met) ternary complex.


Subject(s)
Cell Cycle Proteins/chemistry , Eukaryotic Initiation Factor-5/chemistry , Fungal Proteins/chemistry , Nuclear Proteins/chemistry , Saccharomyces cerevisiae Proteins/chemistry , Blotting, Northern , Blotting, Western , Cell Cycle Proteins/metabolism , Eukaryotic Initiation Factor-3 , Eukaryotic Initiation Factor-5/metabolism , Fungal Proteins/metabolism , Models, Molecular , Nuclear Proteins/metabolism , Protein Binding , Protein Biosynthesis , Protein Structure, Tertiary , RNA, Ribosomal, 18S/metabolism , Ribosomes/metabolism , Saccharomyces cerevisiae Proteins/metabolism
8.
EMBO J ; 22(2): 193-204, 2003 Jan 15.
Article in English | MEDLINE | ID: mdl-12514125

ABSTRACT

Translation initiation factor 1A (eIF1A) is predicted to bind in the decoding site of the 40S ribosome and has been implicated in recruitment of the eIF2-GTP-Met-tRNA i Met ternary complex (TC) and ribosomal scanning. We show that the unstructured C-terminus of eIF1A interacts with the C-terminus of eIF5B, a factor that stimulates 40S-60S subunit joining, and removal of this domain of eIF1A diminishes translation initiation in vivo. These findings support the idea that eIF1A-eIF5B association is instrumental in releasing eIF1A from the ribosome after subunit joining. A larger C-terminal truncation that removes a 3(10) helix in eIF1A deregulates GCN4 translation in a manner suppressed by overexpressing TC, implicating eIF1A in TC binding to 40S ribosomes in vivo. The unstructured N-terminus of eIF1A interacts with eIF2 and eIF3 and is required at low temperatures for a step following TC recruitment. We propose a modular organization for eIF1A wherein a core ribosome-binding domain is flanked by flexible segments that mediate interactions with other factors involved in recruitment of TC and release of eIF1A at subunit joining.


Subject(s)
Eukaryotic Initiation Factor-1 , Eukaryotic Initiation Factor-2/metabolism , Eukaryotic Initiation Factor-3/metabolism , Eukaryotic Initiation Factor-5/metabolism , Peptide Initiation Factors/metabolism , Protein Conformation , Binding Sites , Eukaryotic Initiation Factor-2/chemistry , Eukaryotic Initiation Factor-2/genetics , Eukaryotic Initiation Factor-3/chemistry , Eukaryotic Initiation Factor-3/genetics , Eukaryotic Initiation Factor-5/chemistry , Eukaryotic Initiation Factor-5/genetics , Macromolecular Substances , Peptide Chain Initiation, Translational , Peptide Initiation Factors/chemistry , Peptide Initiation Factors/genetics , Phenotype , Protein Binding , Protein Biosynthesis , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Ribosomes/metabolism , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae Proteins/metabolism , Two-Hybrid System Techniques
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