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1.
Birth Defects Res C Embryo Today ; 90(1): 55-66, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20301218

ABSTRACT

Matrix metalloproteinases (MMPs) are a superfamily of Zn(2+)-dependent proteases that are capable of cleaving the proteinaceous component of the extracellular matrix (ECM). The ECM is a critical medium for cell-cell interactions and can also directly signal cells through cell surface ECM receptors, such as integrins. In addition, many growth factors and signaling molecules are stored in the ECM. Thus, ECM remodeling and/or degradation by MMPs are expected to affect cell fate and behavior during many developmental and pathological processes. Numerous studies have shown that the expression of MMP mRNAs and proteins associates tightly with diverse developmental and pathological processes, such as tumor metastasis and mammary gland involution. In vivo evidence to support the roles of MMPs in these processes has been much harder to get. Here, we will review some of our studies on MMP11, or stromelysin-3, during the thyroid hormone-dependent amphibian metamorphosis, a process that resembles the so-called postembryonic development in mammals (from a few months before to several months after birth in humans when organ growth and maturation take place). Our investigations demonstrate that stromelysin-3 controls apoptosis in different tissues via at least two distinct mechanisms.


Subject(s)
Amphibians/physiology , Apoptosis/physiology , Extracellular Matrix/metabolism , Life Cycle Stages/physiology , Matrix Metalloproteinase 11/physiology , Metamorphosis, Biological , Animals , Embryo, Nonmammalian/embryology , Embryo, Nonmammalian/physiology , Gene Expression Regulation, Developmental , Gene Expression Regulation, Enzymologic , Humans , Thyroid Hormones/physiology , Xenopus laevis/embryology , Xenopus laevis/physiology
2.
PLoS One ; 4(12): e8462, 2009 Dec 24.
Article in English | MEDLINE | ID: mdl-20041154

ABSTRACT

SUMO proteins are small ubiquitin-related modifiers. All SUMOs are synthesized as propeptides that are post-translationally cleaved prior to conjugation. After processing, SUMOs become covalently conjugated to cellular targets through a pathway that is similar to ubiquitination. Ubiquitin like protein proteases/Sentrin specific proteases (Ulp/SENPs) mediate both processing and deconjugation of SUMOs. The action of Ulp/SENPs makes SUMOylation a highly dynamic post-translational modification. To investigate how Ulp/SENPs are regulated in a developmental context, we isolated and characterized all Ulp/SENPs in Xenopus laevis. Xenopus possess homologues of mammalian SENP3, 5, 6 and 7. All of these enzymes reacted with HA-tagged vinyl sulfone derivatives of SUMO-2 (HA-SU2-VS) but not SUMO-1 (HA-SU1-VS), suggesting that they act primarily on SUMO-2 and -3. In contrast, Xenopus possess a single member of the SENP1/SENP2 subfamily of Ulp/SENPs, most closely related to mammalian SENP1. Xenopus SENP1 reacted with HA-SU1-VS and HA-SU2-VS, suggesting that it acts on all SUMO paralogues. We analyzed the mRNA and protein levels for each of the Ulp/SENPs through development; we found that they show distinct patterns of expression that may involve both transcriptional and post-transcriptional regulation. Finally, we have characterized the developmental function of the most abundant Ulp/SENP found within Xenopus eggs, SENP3. Depletion of SENP3 using morpholino antisense oligonucleotides (morpholinos) caused accumulation of high molecular weight SUMO-2/3 conjugated species, defects in developing embryos and changes in the expression of some genes regulated by the transforming growth factor beta (TGF-beta) pathway. These findings collectively indicate that SUMO proteases are both highly regulated and essential for normal development.


Subject(s)
Gene Expression Regulation, Developmental , Peptide Hydrolases/genetics , Small Ubiquitin-Related Modifier Proteins/genetics , Xenopus laevis/embryology , Xenopus laevis/genetics , Animals , Cell Extracts , Embryo, Nonmammalian/cytology , Embryo, Nonmammalian/enzymology , Gene Knockdown Techniques , Ovum/cytology , Ovum/enzymology , Peptide Hydrolases/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sequence Homology, Nucleic Acid , Signal Transduction , Small Ubiquitin-Related Modifier Proteins/metabolism , Substrate Specificity , Transforming Growth Factor beta/metabolism , Xenopus Proteins/genetics , Xenopus Proteins/metabolism
3.
J Biol Chem ; 284(27): 18545-56, 2009 Jul 03.
Article in English | MEDLINE | ID: mdl-19429683

ABSTRACT

Matrix metalloproteinases (MMPs) have been extensively studied because of their functional attributes in development and diseases. However, relatively few in vivo functional studies have been reported on the roles of MMPs in postembryonic organ development. Amphibian metamorphosis is a unique model for studying MMP function during vertebrate development because of its dependence on thyroid hormone (T3) and the ability to easily manipulate this process with exogenous T3. The MMP stromelysin-3 (ST3) is induced by T3, and its expression correlates with cell death during metamorphosis. We have previously shown that ST3 is both necessary and sufficient for larval epithelial cell death in the remodeling intestine. To investigate the roles of ST3 in other organs and especially on different cell types, we have analyzed the effect of transgenic overexpression of ST3 in the tail of premetamorphic tadpoles. We report for the first time that ST3 expression, in the absence of T3, caused significant muscle cell death in the tail of premetamorphic transgenic tadpoles. On the other hand, only relatively low levels of epidermal cell death were induced by precocious ST3 expression in the tail, contrasting what takes place during natural and T3-induced metamorphosis when ST3 expression is high. This cell type-specific apoptotic response to ST3 in the tail suggests distinct mechanisms regulating cell death in different tissues. Furthermore, our analyses of laminin receptor, an in vivo substrate of ST3 in the intestine, suggest that laminin receptor cleavage may be an underlying mechanism for the cell type-specific effects of ST3.


Subject(s)
Apoptosis/physiology , Matrix Metalloproteinase 11/metabolism , Metamorphosis, Biological/physiology , Receptors, Laminin/metabolism , Xenopus laevis/growth & development , Xenopus laevis/physiology , Animals , Epidermis/physiology , Gene Expression Regulation, Developmental , Heat-Shock Response/physiology , Larva/growth & development , Larva/physiology , Matrix Metalloproteinase 11/genetics , Muscles/physiology , Organisms, Genetically Modified , Tail/cytology , Tail/physiology , Transgenes/physiology , Triiodothyronine/metabolism
4.
BMC Genomics ; 10: 81, 2009 Feb 17.
Article in English | MEDLINE | ID: mdl-19222855

ABSTRACT

BACKGROUND: Matrix metalloproteinases (MMPs) are members of the superfamily of Zn2+ dependent extracellular or membrane-bound endopeptidases which have been implicated to play critical roles in vertebrate development and human pathogenesis. A number of MMP genes have been found to be upregulated in some or all organs during frog metamorphosis, suggesting that different MMPs may have different functions in various organs/tissues. The recent advances in EST (expressed sequence tag) sequencing and the completion of the genome of Xenopus (X.) tropicalis prompted us to systematically analyze the existence of MMPs in the Xenopus genome. RESULTS: We examined X. laevis and X. tropicalis ESTs and genomic sequences for MMPs and obtained likely homologs for 20 out of the 25 MMPs known in higher vertebrates. Four of the five missing MMPs, i.e. MMPs 8, 10, 12 and 27, were all encoded on human Chromosome 11 and the other missing MMP, MMP22 (a chicken MMP), was also absent in human genome. In addition, we identified several novel MMPs which appears to be derived from unique duplications over evolution, are present in the genomes of both Xenopus species. CONCLUSION: We identified the homologs of most of the mammalian MMPs in Xenopus and discovered a number of novel MMPs. Our results suggest that MMP genes undergo dynamic changes over evolution. It will be of interest in the future to investigate whether MMP expression and functions during vertebrate development are conserved. The sequence information reported here should facilitate such an endeavor in the near future.


Subject(s)
Evolution, Molecular , Gene Duplication , Matrix Metalloproteinases/genetics , Xenopus/genetics , Amino Acid Sequence , Animals , Base Sequence , Computational Biology , DNA, Complementary/genetics , Expressed Sequence Tags , Genome , Humans , Molecular Sequence Data , Phylogeny , Sequence Analysis, DNA
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