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1.
Science ; 377(6604): 411-415, 2022 07 22.
Article in English | MEDLINE | ID: mdl-35862530

ABSTRACT

Tetrodotoxin (TTX) is a neurotoxic natural product that is an indispensable probe in neuroscience, a biosynthetic and ecological enigma, and a celebrated target of synthetic chemistry. Here, we present a stereoselective synthesis of TTX that proceeds in 22 steps from a glucose derivative. The central cyclohexane ring of TTX and its α-tertiary amine moiety were established by the intramolecular 1,3-dipolar cycloaddition of a nitrile oxide, followed by alkynyl addition to the resultant isoxazoline. A ruthenium-catalyzed hydroxylactonization set the stage for the formation of the dioxa-adamantane core. Installation of the guanidine, oxidation of a primary alcohol, and a late-stage epimerization gave a mixture of TTX and anhydro-TTX. This synthetic approach could give ready access to biologically active derivatives.


Subject(s)
Tetrodotoxin , Voltage-Gated Sodium Channel Blockers , Catalysis , Cycloaddition Reaction , Guanidine/chemistry , Ruthenium/chemistry , Stereoisomerism , Tetrodotoxin/chemical synthesis , Voltage-Gated Sodium Channel Blockers/chemical synthesis
2.
J Am Chem Soc ; 2021 Jun 15.
Article in English | MEDLINE | ID: mdl-34130458

ABSTRACT

The molecular structure of nanothreads produced by the slow compression of 13C4-furan was studied by advanced solid-state NMR. Spectral editing showed that >95% of carbon atoms were bonded to one hydrogen (C-H) and that there were 2-4% CH2, 0.6% C═O, and <0.3% CH3 groups. Alkenes accounted for 18% of the CH moieties, while trapped, unreacted furan made up 7%. Two-dimensional (2D) 13C-13C and 1H-13C NMR identified 12% of all carbon in asymmetric O-CH═CH-CH-CH- and 24% in symmetric O-CH-CH═CH-CH- rings. While the former represented defects or chain ends, some of the latter appeared to form repeating thread segments. Around 10% of carbon atoms were found in highly ordered, fully saturated nanothread segments. Unusually slow 13C spin-exchange with sites outside the perfect thread segments documented a length of at least 14 bonds; the small width of the perfect-thread signals also implied a fairly long, regular structure. Carbons in the perfect threads underwent relatively slow spin-lattice relaxation, indicating slow spin exchange with other threads and smaller amplitude motions. Through partial inversion recovery, the signals of the perfect threads were observed and analyzed selectively. Previously considered syn-threads with four different C-H bond orientations were ruled out by centerband-only detection of exchange NMR, which was, on the contrary, consistent with anti-threads. The observed 13C chemical shifts were matched well by quantum-chemical calculations for anti-threads but not for more complex structures like syn/anti-threads. These observations represent the first direct determination of the atomic-level structure of fully saturated nanothreads.

3.
Sci Adv ; 6(8): eaay5064, 2020 02.
Article in English | MEDLINE | ID: mdl-32128406

ABSTRACT

PROTACs (PROteolysis TArgeting Chimeras) are bifunctional molecules that target proteins for ubiquitylation by an E3 ligase complex and subsequent degradation by the proteasome. They have emerged as powerful tools to control the levels of specific cellular proteins. We now introduce photoswitchable PROTACs that can be activated with the spatiotemporal precision that light provides. These trifunctional molecules, which we named PHOTACs (PHOtochemically TArgeting Chimeras), consist of a ligand for an E3 ligase, a photoswitch, and a ligand for a protein of interest. We demonstrate this concept by using PHOTACs that target either BET family proteins (BRD2,3,4) or FKBP12. Our lead compounds display little or no activity in the dark but can be reversibly activated with different wavelengths of light. Our modular approach provides a method for the optical control of protein levels with photopharmacology and could lead to new types of precision therapeutics that avoid undesired systemic toxicity.


Subject(s)
Optical Phenomena , Proteolysis , Cell Line, Tumor , Humans , Light , Proteolysis/radiation effects , Tacrolimus Binding Protein 1A/metabolism
4.
J Am Chem Soc ; 141(43): 17295-17304, 2019 10 30.
Article in English | MEDLINE | ID: mdl-31584272

ABSTRACT

Azobenzenes are versatile photoswitches that have found widespread use in a variety of fields, ranging from photopharmacology to the material sciences. In addition to regular azobenzenes, the cyclic diazocines have recently emerged. Although diazocines have fascinating conformational and photophysical properties, their use has been limited by their synthetic accessibility. Herein, we present a general, high-yielding protocol that relies on the oxidative cyclization of dianilines. In combination with a modular substrate synthesis, it allows for rapid access to diversely functionalized diazocines on gram scales. Our work systematically explores substituent effects on the photoisomerization and thermal relaxation of diazocines. It will enable their incorporation into a wide variety of functional molecules, unlocking the full potential of these emerging photoswitches. The method can be applied to the synthesis of a new cyclic azobenzene with a nine-membered central ring and distinct properties.


Subject(s)
Azo Compounds/chemistry , Azocines/chemistry , Azo Compounds/chemical synthesis , Azocines/chemical synthesis , Copper/chemistry , Cyclization , Magnetic Resonance Spectroscopy , Oxidation-Reduction , Photochemical Processes , Spectrophotometry, Ultraviolet
5.
Angew Chem Int Ed Engl ; 58(43): 15421-15428, 2019 10 21.
Article in English | MEDLINE | ID: mdl-31441199

ABSTRACT

Photopharmacology relies on ligands that change their pharmacodynamics upon photoisomerization. Many of these ligands are azobenzenes that are thermodynamically more stable in their elongated trans-configuration. Often, they are biologically active in this form and lose activity upon irradiation and photoisomerization to their cis-isomer. Recently, cyclic azobenzenes, so-called diazocines, have emerged, which are thermodynamically more stable in their bent cis-form. Incorporation of these switches into a variety of photopharmaceuticals could convert dark-active ligands into dark-inactive ligands, which is preferred in most biological applications. This "pharmacological sign-inversion" is demonstrated for a photochromic blocker of voltage-gated potassium channels, termed CAL, and a photochromic opener of G protein-coupled inwardly rectifying potassium (GIRK) channels, termed CLOGO.


Subject(s)
Azo Compounds/chemistry , G Protein-Coupled Inwardly-Rectifying Potassium Channels/agonists , Light , Potassium Channel Blockers/chemistry , Action Potentials/drug effects , Azo Compounds/pharmacology , Cyclization , Drug Design , G Protein-Coupled Inwardly-Rectifying Potassium Channels/genetics , G Protein-Coupled Inwardly-Rectifying Potassium Channels/metabolism , HEK293 Cells , Humans , Isomerism , Lidocaine/chemistry , Patch-Clamp Techniques , Potassium Channel Blockers/pharmacology , Thermodynamics
6.
ACS Cent Sci ; 3(1): 39-46, 2017 Jan 25.
Article in English | MEDLINE | ID: mdl-28149951

ABSTRACT

Aplydactone (1) is a brominated ladderane sesquiterpenoid that was isolated from the sea hare Aplysia dactylomela together with the chamigranes dactylone (2) and 10-epi-dactylone (3). Given the habitat of A. dactylomela, it seems likely that 1 is formed from 2 through a photochemical [2 + 2] cycloaddition. Here, we disclose a concise synthesis of 1, 2, and 3 that was guided by excited state theory and relied on several highly stereoselective transformations. Our experiments and calculations confirm the photochemical origin of 1 and explain why it is formed as the sole isomer. Irradiation of 3 with long wavelength UV light resulted in a [2 + 2] cycloaddition that proceeded with opposite regioselectivity. On the basis of this finding, it seems likely that the resulting regioisomer, termed "8-epi-isoaplydactone", could also be found in A. dactylomela.

7.
Science ; 354(6317): 1260-1265, 2016 12 09.
Article in English | MEDLINE | ID: mdl-27940867

ABSTRACT

Persistent free radicals have become indispensable in the synthesis of organic materials through living radical polymerization. However, examples of their use in the synthesis of small molecules are rare. Here, we report the application of persistent radical and quinone methide intermediates to the synthesis of the resveratrol tetramers nepalensinol B and vateriaphenol C. The spontaneous cleavage and reconstitution of exceptionally weak carbon-carbon bonds has enabled a stereoconvergent oxidative dimerization of racemic materials in a transformation that likely coincides with the biogenesis of these natural products. The efficient synthesis of higher-order oligomers of resveratrol will facilitate the biological studies necessary to elucidate their mechanism(s) of action.


Subject(s)
Benzofurans/chemical synthesis , Biological Products/chemical synthesis , Indolequinones/chemistry , Resorcinols/chemical synthesis , Stilbenes/chemical synthesis , Carbon/chemistry , Dimerization , Oxidation-Reduction , Resveratrol
8.
Org Lett ; 18(19): 5166-5169, 2016 10 07.
Article in English | MEDLINE | ID: mdl-27662412

ABSTRACT

Lignin valorization has long been recognized as a sustainable solution for the renewable production of aromatic compounds. Two-step oxidation/reduction strategies, whereby the first oxidation step is required to "activate" lignin systems for controlled fragmentation reactions, have recently emerged as viable routes toward this goal. Herein we describe a catalytic protocol for oxidation of lignin model systems by combining photoredox and Pd catalysis. The developed dual catalytic protocol allowed the efficient oxidation of lignin model substrates at room temperature to afford the oxidized products in good to excellent yields.

9.
Tetrahedron ; 72(26): 3775-3780, 2016 Jun 30.
Article in English | MEDLINE | ID: mdl-27551160

ABSTRACT

The one-pot, three-component, coupling reaction of indoles/pyrroles, dimethyl malonate, and acetic acid was performed using Mn(III) acetate as an oxidant. In the presence of Mn(OAc)3, indole-2, and indole-3-carbonyl compounds were alkylated at the 3- and 2- positions, respectively, with subsequent oxidation and nucleophilic capture occurring at the newly formed benzylic carbon. In contrast, oxidation of 2- and 3-indole carboxylic acids afforded the corresponding 2-oxindol-3-ylidenes and 3-oxindol-2-ylidenes. The reaction conditions, scope, and mechanism are discussed herein.

10.
Org Biomol Chem ; 14(6): 1853-914, 2016 Feb 14.
Article in English | MEDLINE | ID: mdl-26732312

ABSTRACT

The development of a sustainable, carbon-neutral biorefinery has emerged as a prominent scientific and engineering goal of the 21st century. As petroleum has become less accessible, biomass-based carbon sources have been investigated for utility in fuel production and commodity chemical manufacturing. One underutilized biomaterial is lignin; however, its highly crosslinked and randomly polymerized composition have rendered this biopolymer recalcitrant to existing chemical processing. More recently, insight into lignin's molecular structure has reinvigorated chemists to develop catalytic methods for lignin depolymerization. This review examines the development of transition-metal catalyzed reactions and the insights shared between the homogeneous and heterogeneous catalytic systems towards the ultimate goal of valorizing lignin to produce value-added products.


Subject(s)
Biofuels , Lignin/chemistry , Transition Elements/chemistry , Catalysis , Molecular Structure
13.
Angew Chem Int Ed Engl ; 54(12): 3754-7, 2015 Mar 16.
Article in English | MEDLINE | ID: mdl-25650836

ABSTRACT

An efficient synthetic route to the resveratrol oligomers quadrangularin A and pallidol is reported. It features a scalable biomimetic oxidative dimerization that proceeds in excellent yield and with complete regioselectivity. A systematic evaluation of the natural products and their synthetic precursors as radical-trapping antioxidants has revealed that, contrary to popular belief, this mode of action is unlikely to account for their observed biological activity.


Subject(s)
Antioxidants/chemistry , Polycyclic Compounds/chemical synthesis , Stilbenes/chemistry , Stilbenes/chemical synthesis , Antioxidants/chemical synthesis , Antioxidants/metabolism , Biological Products/chemical synthesis , Biological Products/chemistry , Biomimetics , Cell Line , Dimerization , Humans , Indolequinones/chemistry , Oxidation-Reduction , Polycyclic Compounds/chemistry , Polycyclic Compounds/metabolism , Resveratrol , Stereoisomerism , Stilbenes/metabolism
14.
J Am Chem Soc ; 136(4): 1218-21, 2014 Jan 29.
Article in English | MEDLINE | ID: mdl-24367945

ABSTRACT

The development of a room-temperature lignin degradation strategy consisting of a chemoselective benzylic oxidation with a recyclable oxidant ([4-AcNH-TEMPO]BF4) and a catalytic reductive C-O bond cleavage utilizing the photocatalyst [Ir(ppy)2(dtbbpy)]PF6 is described. This system was tested on relevant lignin model substrates containing ß-O-4 linkages to generate fragmentation products in good to excellent yields.


Subject(s)
Lignin/chemistry , Temperature , Catalysis , Iridium/chemistry , Molecular Structure , Organometallic Compounds/chemistry , Photochemical Processes
15.
Org Lett ; 13(23): 6320-3, 2011 Dec 02.
Article in English | MEDLINE | ID: mdl-22070096

ABSTRACT

An intramolecular cyclization cascade reaction has been developed utilizing a high valent palladium intermediate that generates a carbon-carbon and carbon-oxygen bond in a single transformation. This method provides rapid access to highly functionalized tricyclic scaffolds, including spirocyclic cyclohexadienones. Good yields and mild conditions are reported with high tolerance toward oxygen and water.


Subject(s)
Cyclohexenes/chemical synthesis , Palladium/chemistry , Spiro Compounds/chemical synthesis , Catalysis , Cyclization , Cyclohexenes/chemistry , Molecular Structure , Oxygen/chemistry , Spiro Compounds/chemistry , Water/chemistry
16.
Org Lett ; 12(13): 3104-7, 2010 Jul 02.
Article in English | MEDLINE | ID: mdl-20518528

ABSTRACT

The photoredox-mediated direct intermolecular C-H functionalization of substituted indoles, pyrroles, and furans with diethyl bromomalonate is described, utilizing the visible light-induced reductive quenching pathway of Ru(bpy)(3)Cl(2). An analysis of reductive quenchers and mechanistic considerations has led to an optimized protocol for the heteroaromatic alkylations, providing products in good yields and regioselectivities, as well as successfully eliminating previously observed competitive side reactions. This methodology is highlighted by its neutral conditions, activity at ambient temperatures, low catalyst loading, functional group tolerance, and chemoselectivity.


Subject(s)
Electrons , Heterocyclic Compounds/chemistry , Light , Malonates/chemistry , Furans/chemistry , Indoles/chemistry , Molecular Structure , Oxidation-Reduction , Photochemistry , Pyrroles/chemistry , Stereoisomerism
17.
J Biol Chem ; 283(36): 25074-81, 2008 Sep 05.
Article in English | MEDLINE | ID: mdl-18606817

ABSTRACT

High density lipoproteins (HDL) are major plasma carriers of sphingosine 1-phosphate (S1P). Here we show that HDL increases endothelial barrier integrity as measured by electric cell substrate impedance sensing. S1P was implicated as the mediator in this process through findings showing that pertussis toxin, an inhibitor of Gi-coupled S1P receptors, as well as antagonists of the S1P receptor, S1P1, inhibited barrier enhancement by HDL. Additional findings show that HDL stimulates endothelial cell activation of Erk1/2 and Akt, signaling pathway intermediates that have been implicated in S1P-dependent endothelial barrier activity. HDL was also found to promote endothelial cell motility, a process that may also relate to endothelial barrier function in the context of a vascular injury response. The effects of HDL on endothelial cell Erk1/2 and Akt activation and motility were suppressed by pertussis toxin and S1P1 antagonists. However, both HDL-induced barrier enhancement and HDL-induced motility showed a greater dependence on Akt activation as compared with Erk1/2 activation. Together, the findings indicate that HDL has endothelial barrier promoting activities, which are attributable to its S1P component and signaling through the S1P1/Akt pathway.


Subject(s)
Cell Movement/physiology , Endothelial Cells/metabolism , Lipoproteins, HDL/metabolism , Lysophospholipids/metabolism , MAP Kinase Signaling System/physiology , Receptors, Lysosphingolipid/metabolism , Sphingosine/analogs & derivatives , Cell Movement/drug effects , Cells, Cultured , Endothelial Cells/cytology , Enzyme Activation/drug effects , Enzyme Activation/physiology , Humans , Lipoproteins, HDL/pharmacology , Lysophospholipids/pharmacology , MAP Kinase Signaling System/drug effects , Mitogen-Activated Protein Kinase 1/metabolism , Mitogen-Activated Protein Kinase 3/metabolism , Pertussis Toxin/pharmacology , Proto-Oncogene Proteins c-akt/metabolism , Sphingosine/metabolism , Sphingosine/pharmacology
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