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Structure ; 28(4): 475-487.e3, 2020 04 07.
Article in English | MEDLINE | ID: mdl-32053772

ABSTRACT

Escherichia coli lipoprotein precursors at the inner membrane undergo three maturation stages before transport by the Lol system to the outer membrane. Here, we develop a pipeline to simulate the membrane association of bacterial lipoproteins in their four maturation states. This has enabled us to model and simulate 81 of the predicted 114 E. coli lipoproteins and reveal their interactions with the host lipid membrane. As part of this set we characterize the membrane contacts of LolB, the lipoprotein involved in periplasmic translocation. We also consider the means and bioenergetics for lipoprotein localization. Our calculations uncover a preference for LolB over LolA and therefore indicate how a lipoprotein may be favorably transferred from the inner to outer membrane. Finally, we reveal that LolC has a role in membrane destabilization, thereby promoting lipoprotein transfer to LolA.


Subject(s)
Bacterial Outer Membrane Proteins/chemistry , Bacterial Outer Membrane/metabolism , Escherichia coli Proteins/chemistry , Molecular Chaperones/chemistry , Molecular Dynamics Simulation , Periplasmic Binding Proteins/chemistry , Bacterial Outer Membrane/chemistry , Bacterial Outer Membrane Proteins/metabolism , Escherichia coli , Escherichia coli Proteins/metabolism , Molecular Chaperones/metabolism , Periplasm/metabolism , Periplasmic Binding Proteins/metabolism , Protein Binding , Protein Transport
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