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1.
Appl Radiat Isot ; 111: 92-103, 2016 May.
Article in English | MEDLINE | ID: mdl-26943904

ABSTRACT

The "Influence Method" is conceived for the absolute determination of a nuclear particle flux in the absence of known detector efficiency and without the need to register coincidences of any kind. This method exploits the influence of the presence of one detector in the count rate of another detector, when they are placed one behind the other and define statistical estimators for the absolute number of incident particles and for the efficiency (Rios and Mayer, 2015a). Its detailed mathematical description was recently published (Rios and Mayer, 2015b) and its practical implementation in the measurement of a moderated neutron flux arising from an isotopic neutron source was exemplified in (Rios and Mayer, 2016). With the objective of further reducing the measurement uncertainties, in this article we extend the method for the case of multiple detectors placed one behind the other. The new estimators for the number of particles and the detection efficiency are herein derived.

2.
Water Res ; 90: 265-276, 2016 Mar 01.
Article in English | MEDLINE | ID: mdl-26745175

ABSTRACT

This was a detailed investigation of the seasonal occurrence, dynamics, removal and resistance of human-associated genetic Bacteroidetes faecal markers (GeBaM) compared with ISO-based standard faecal indicator bacteria (SFIB), human-specific viral faecal markers and one human-associated Bacteroidetes phage in raw and treated wastewater of municipal and domestic origin. Characteristics of the selected activated sludge wastewater treatment plants (WWTPs) from Austria and Germany were studied in detail (WWTPs, n = 13, connected populations from 3 to 49000 individuals), supported by volume-proportional automated 24-h sampling and chemical water quality analysis. GeBaM were consistently detected in high concentrations in raw (median log10 8.6 marker equivalents (ME) 100 ml(-1)) and biologically treated wastewater samples (median log10 6.2-6.5 ME 100 ml(-1)), irrespective of plant size, type and time of the season (n = 53-65). GeBaM, Escherichia coli, and enterococci concentrations revealed the same range of statistical variability for raw (multiplicative standard deviations s* = 2.3-3.0) and treated wastewater (s* = 3.7-4.5), with increased variability after treatment. Clostridium perfringens spores revealed the lowest variability for raw wastewater (s* = 1.5). In raw wastewater correlations among microbiological parameters were only detectable between GeBaM, C. perfringens and JC polyomaviruses. Statistical associations amongst microbial parameters increased during wastewater treatment. Two plants with advanced treatment were also investigated, revealing a minimum log10 5.0 (10th percentile) reduction of GeBaM in the activated sludge membrane bioreactor, but no reduction of the genetic markers during UV irradiation (254 nm). This study highlights the potential of human-associated GeBaM to complement wastewater impact monitoring based on the determination of SFIB. In addition, human-specific JC polyomaviruses and adenoviruses seem to be a valuable support if highly specific markers are needed.


Subject(s)
Bacteroidetes/isolation & purification , Feces/microbiology , Wastewater/microbiology , Water Microbiology , Adenoviridae/isolation & purification , Austria , Bioreactors , Clostridium perfringens/isolation & purification , Enterococcus/isolation & purification , Environmental Monitoring , Escherichia coli/isolation & purification , Germany , Humans , JC Virus/isolation & purification , Models, Statistical , Sewage/microbiology , Ultraviolet Rays , Waste Disposal, Fluid , Water Pollutants , Water Purification
3.
Appl Environ Microbiol ; 81(15): 5134-43, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26002900

ABSTRACT

Because of high diurnal water quality fluctuations in raw municipal wastewater, the use of proportional autosampling over a period of 24 h at municipal wastewater treatment plants (WWTPs) to evaluate carbon, nitrogen, and phosphorus removal has become a standard in many countries. Microbial removal or load estimation at municipal WWTPs, however, is still based on manually recovered grab samples. The goal of this study was to establish basic knowledge regarding the persistence of standard bacterial fecal indicators and Bacteroidetes genetic microbial source tracking markers in municipal wastewater in order to evaluate their suitability for automated sampling, as the potential lack of persistence is the main argument against such procedures. Raw and secondary treated wastewater of municipal origin from representative and well-characterized biological WWTPs without disinfection (organic carbon and nutrient removal) was investigated in microcosm experiments at 5 and 21°C with a total storage time of 32 h (including a 24-h autosampling component and an 8-h postsampling phase). Vegetative Escherichia coli and enterococci, as well as Clostridium perfringens spores, were selected as indicators for cultivation-based standard enumeration. Molecular analysis focused on total (AllBac) and human-associated genetic Bacteroidetes (BacHum-UCD, HF183 TaqMan) markers by using quantitative PCR, as well as 16S rRNA gene-based next-generation sequencing. The microbial parameters showed high persistence in both raw and treated wastewater at 5°C under the storage conditions used. Surprisingly, and in contrast to results obtained with treated wastewater, persistence of the microbial markers in raw wastewater was also high at 21°C. On the basis of our results, 24-h autosampling procedures with 5°C storage conditions can be recommended for the investigation of fecal indicators or Bacteroidetes genetic markers at municipal WWTPs. Such autosampling procedures will contribute to better understanding and monitoring of municipal WWTPs as sources of fecal pollution in water resources.


Subject(s)
Bacteria/classification , Bacteria/isolation & purification , Bacteriological Techniques/methods , DNA Fingerprinting/methods , Feces/microbiology , Wastewater/microbiology , Water Purification , Bacteria/genetics , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , High-Throughput Nucleotide Sequencing , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Temperature
4.
Appl Environ Microbiol ; 79(16): 5089-92, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23747707

ABSTRACT

During a 3-year study, Clostridium perfringens was investigated in defined fecal sources from a temperate alluvial backwater area of a large river system. The results reveal that using C. perfringens as a conservative water quality indicator for total fecal pollution monitoring is no longer justified but suggest that it can be used as a tracer for excreta from nonherbivorous wildlife and human sewage.


Subject(s)
Artiodactyla/microbiology , Birds/microbiology , Clostridium perfringens/isolation & purification , Environmental Monitoring/methods , Groundwater/microbiology , Pets/microbiology , Animals , Austria , Feces/microbiology , Humans , Seasons , Sewage/microbiology
5.
Appl Radiat Isot ; 67(9): 1711-5, 2009 Sep.
Article in English | MEDLINE | ID: mdl-19394840

ABSTRACT

The relative intensities of different gamma emissions produced after the reaction (115)In(n,gamma)(116)In were analyzed for the particular case of incident neutron energies around the 1.45 eV indium absorption resonance. For this purpose, a pulsed neutron source in combination with the time-of-flight method for selecting the incident neutron energy range was employed. For neutrons around the mentioned absorption resonance the prompt gamma spectrum was extended to energies below 273 keV, and the intensities of gamma emissions not reported in the literature for epithermal neutrons were determined.

7.
Mutat Res ; 279(1): 41-8, 1992 May 01.
Article in English | MEDLINE | ID: mdl-1374531

ABSTRACT

Triploid and tetraploid strains of Saccharomyces cerevisiae were constructed and the spontaneous loss during mitosis of one, two or three copies of chromosome VII was determined. In one strain, a triploid (VM2) in which expression of the recessive alleles can be observed only after loss of two copies of chromosome VII (3N-2), the spontaneous frequency of chromosome loss was lower than in the diploid D61.M. In another strain, a tetraploid (VM4) that also requires the loss of two copies of chromosome VII for observation (4N-2) of the recessive alleles, the spontaneous frequency was slightly higher than in the diploid D61.M. The spontaneous frequency of other genetic events (that is, mutation, recombination or chromosome breakage) were lower by 2-3 orders of magnitude than in the diploid strain D61.M. Induction of chromosome loss and other genetic events by nocodazole, ethyl acetate, hydroxyurea and ethyl methanesulfonate was determined in D61.M, VM2, and VM4, and the results were compared. Nocodazole and ethyl acetate induced chromosome loss in both the triploid and the tetraploid strains at lower concentrations than required in the diploid. These compounds also induced elevated frequencies of other genetic events in both the triploid and the tetraploid strains but not in the diploid. Hydroxyurea induced elevated frequencies of chromosome loss in the diploid and the tetraploid. Frequencies of chromosome loss in the triploid treated with hydroxyurea, although elevated, are based on observation of very few colonies of the correct phenotype. Ethyl methanesulfonate failed to induce chromosome loss in any of the three strains. Hydroxyurea and ethyl methanesulfonate did, however, induce very high frequencies of other genetic events.


Subject(s)
Chromosomes, Fungal/drug effects , Diploidy , Mutagens/toxicity , Polyploidy , Saccharomyces cerevisiae/genetics , Acetates/toxicity , Ethyl Methanesulfonate/toxicity , Hydroxyurea/toxicity , Nocodazole/toxicity , Saccharomyces cerevisiae/drug effects
8.
Biochemistry ; 30(15): 3589-97, 1991 Apr 16.
Article in English | MEDLINE | ID: mdl-1849734

ABSTRACT

The trimeric form of protein phosphatase 2A (PP2A1 or polycation-stimulated protein phosphatase H1) was purified to homogeneity from rabbit skeletal muscle. Preparative SDS-polyacrylamide gel electrophoresis was used to purify the individual subunits with relative molecular masses of 36, 55, and 65 kDa. Sequence analysis of five peptides from the 65-kDa regulatory subunit (PR65) suggested that it was identical with the PR65 subunit derived from the dimeric protein phosphatase 2A2. Amino acid sequences derived from the 55-kDa regulatory subunit (PR55) were used to clone human and rabbit cDNAs encoding this protein. The PR55 subunit was found to be encoded by two genes, termed alpha and beta. The open reading frames of the PR55 alpha and beta cDNAs spanned 1341 and 1329 nucleotides, respectively, and predicted proteins with a molecular mass of about 52 kDa that are 86% identical. Comparison of the human PR55 amino acid sequences with the data obtained from the rabbit skeletal muscle protein and a partial rabbit PR55 beta cDNA clone indicated a high degree of conservation. Analysis of the mRNA expression in human cell lines revealed that the PR55 alpha isoform was encoded by two transcripts of about 2.3 and 2.5 kb and a less abundant 4.4-kb mRNA. Whereas a PR55 beta transcript of about 2.3 kb was detected at high levels in the neuroblastoma derived cell line LA-N-1, the level of the mRNA was very low in the other human cell lines analyzed. Interestingly, the PR55 sequence showed limited homology to the catalytic domain (domains VI-IX) of the c-abl protein tyrosine kinase.


Subject(s)
Neurons/metabolism , Phosphoprotein Phosphatases/genetics , Amino Acid Sequence , Base Sequence , Blotting, Northern , Cell Line , Cloning, Molecular , DNA/chemistry , Gene Expression , Genomic Library , Humans , Isomerism , Molecular Sequence Data , Molecular Weight , Phosphoprotein Phosphatases/chemistry , Protein Phosphatase 2 , Protein-Tyrosine Kinases/genetics , Proto-Oncogene Proteins c-abl/genetics , RNA, Messenger/metabolism , Sequence Homology, Nucleic Acid
9.
Biochemistry ; 30(1): 89-97, 1991 Jan 08.
Article in English | MEDLINE | ID: mdl-1846293

ABSTRACT

The alpha and beta isoforms of the human protein phosphatase 2A catalytic subunit are encoded by distinct genes whose expression appears to be differentially regulated. To obtain a better understanding of the mechanism(s) that regulate(s) the expression of these two transcripts, we have cloned the genes encoding both isoforms. Both genes (each approximately 30 kbp) are composed of seven exons and six introns which intervene at identical locations, suggesting that they were derived from a common ancestral gene. However, the 5' upstream regions as well as the regions encoding the 5' and 3' untranslated sequences of each mRNA are different. The promoters of both genes are very G+C rich and lack the TATA and CCAAT sequences typical of many housekeeping genes. The C alpha gene contains several potential Sp1 binding sites and a potential cAMP-responsive element. Northern analysis using RNAs isolated from several different human cell lines showed that the steady-state C alpha mRNA was, in general, more abundant than the C beta mRNA. To determine whether the promoters regulate the differential C alpha and C beta RNA expression, they were fused to the reporter gene chloramphenicol acetyltransferase and transiently expressed in HeLa cells. Expression from the C alpha promoter was 7-10 times stronger than that from the C beta promoter, which paralleled the endogenous C alpha and C beta mRNA levels in HeLa cells. These data suggest that the steady-state levels of the C alpha and C beta mRNAs, are due, at least in part, to different promoter activities.


Subject(s)
Gene Expression Regulation , Genes , Multigene Family , Phosphoprotein Phosphatases/genetics , Transcription, Genetic , Amino Acid Sequence , Animals , Base Sequence , Blotting, Northern , Cloning, Molecular , Exons , Genomic Library , Humans , Leukocytes/enzymology , Macromolecular Substances , Molecular Sequence Data , Nucleic Acid Hybridization , Protein Phosphatase 2 , Restriction Mapping , Sequence Homology, Nucleic Acid
10.
Article in English | MEDLINE | ID: mdl-2169803

ABSTRACT

The two isoforms of protein phosphatase 2A catalytic subunit are expressed at different levels in all tissues and human cell lines analyzed. This differential expression suggests a specific function for the two isoforms. The structures of the C alpha and C beta genes are highly conserved. The most sequence divergence occurs in exon I and in the 3'-nontranslated region of exon VII. These divergent regions are highly conserved between species implying that they serve a specific function in terms of RNA regulation. Both promoter regions show characteristic features of "housekeeping" genes. This correlates well with a basal expression of both mRNAs observed in all cell lines and tissues. However, a differential expression of the two isoforms was observed. Analysis of the promoter activity in transiently transfected HeLa cells indicates that this differential expression is partially due to different promoter activities. It remains an interesting question whether the CRE in the alpha gene provides a mechanism for the transcriptional regulation by the cAMP signal transduction pathway. This would appear to be the first description where a protein kinase can modulate the mRNA levels of a protein phosphatase.


Subject(s)
Phosphoprotein Phosphatases/genetics , Base Sequence , Cell Line , Cyclic AMP/physiology , Enzyme Induction , Genes , Humans , Molecular Sequence Data , Phosphoprotein Phosphatases/biosynthesis , Phosphorylation , Promoter Regions, Genetic , Protein Phosphatase 2 , Second Messenger Systems , Sequence Homology, Nucleic Acid
11.
Environ Mol Mutagen ; 11(1): 31-40, 1988.
Article in English | MEDLINE | ID: mdl-3276507

ABSTRACT

A number of solvent compounds that were tested in Saccharomyces cerevisiae were potent inducers of aneuploidy, although they did not induce any other genetic effects. As an extention of these earlier findings, 1-methyl-2-pyrrolidinone was tested and was found to induce aneuploidy. Several structurally related compounds were also tested; 2-pyrrolidinone induced aneuploidy, but succinimide, pyrrolidine, 1-methylpyrrolidine, 1-methyl-3-pyrrolidinol, and 2-pyrrolidineethanol did not. Maleimide and its N-hydroxy, N-methyl, and N-ethyl derivatives were also negative for aneuploidy induction.


Subject(s)
Aneuploidy , Pyrrolidinones/toxicity , Saccharomyces cerevisiae/genetics , Solvents/toxicity , Maleimides/toxicity , Saccharomyces cerevisiae/drug effects , Structure-Activity Relationship
12.
Environ Mol Mutagen ; 11(3): 323-31, 1988.
Article in English | MEDLINE | ID: mdl-3281826

ABSTRACT

While studying ways to improve responsiveness of Saccharomyces cerevisiae strain D61.M to agents that induce aneuploidy, we noted that nocodazole, which strongly induces aneuploidy when yeast cells are treated in yeast extract-peptone-dextrose (YEPD) medium, had no effect when a synthetic complete (SC) medium was used. Further study revealed that the presence of peptone was necessary for induction. Other aneuploidy-inducing agents, including ethyl acetate, acetone, and methyl benzimidazole-2-yl-carbamate (MBC), were equally active in either medium. Benomyl, which degrades to MBC, was less active in SC than in YEPD medium.


Subject(s)
Aneuploidy/drug effects , Benzimidazoles/pharmacology , Culture Media/pharmacology , Peptones/pharmacology , Saccharomyces cerevisiae/drug effects , Benzimidazoles/antagonists & inhibitors , Mutagens/pharmacology , Nocodazole , Saccharomyces cerevisiae/genetics
13.
Mutat Res ; 149(3): 333-8, 1985 May.
Article in English | MEDLINE | ID: mdl-3887144

ABSTRACT

A number of aprotic solvents which had previously been found to induce mitotic aneuploidy in yeast were tested for their effects on re-assembly of twice recycled tubulin from pig brain. Some of the solvents which were strong aneuploidy-inducing mutagens in yeast slowed down tubulin assembly in vitro at concentrations lower than those required for aneuploidy induction. Ethyl acetate, methyl acetate, diethyl ketone and acetonitrile fell into this category. Other strong aneuploidy-inducing agents like acetone and 2-methoxyethyl acetate accelerated tubulin assembly. Non-genetically active methyl isopropyl ketone and isopropyl acetate both accelerated assembly, whereas methyl n-propyl ketone and n-propyl acetate were weak inducers of aneuploidy and slowed down the rate and extent of assembly. Those chemicals which slowed down the assembly rate also reduced the extent of assembly. Most chemicals which accelerated assembly also led to an increased extent of assembly, with the exception of isopropyl acetate. At the higher concentrations, however, a maximum assembly rate was reached which was followed by a slow decline. Although a perfect correlation between effects on the induction of chromosomal malsegregation and the interference with tubulin assembly in vitro was not seen, the experiments with tubulin were carried out using this class of chemicals because some of them strongly induced mitotic aneuploidy under conditions which suggested tubulin to be the prime target. The lack of a perfect coincidence might be due to species differences between the porcine brain and the yeast spindle tubulin, or the test for aneuploidy induction may have been negative because the concentrations required for an effect on yeast tubulin may be greater than the general lethal toxicity limit. Bearing this reservation in mind, the results suggest that the yeast aneuploidy test has a considerable predictive value for mammalian mutagenicity.


Subject(s)
Microtubules/drug effects , Spindle Apparatus/drug effects , Tubulin Modulators , Acetates/pharmacology , Animals , Mitosis/drug effects , Protein Binding/drug effects , Saccharomyces cerevisiae/drug effects , Solvents , Structure-Activity Relationship , Swine
15.
Mem Cognit ; 4(5): 603-8, 1976 Sep.
Article in English | MEDLINE | ID: mdl-21286987

ABSTRACT

Ninety-seven subjects memorized nine associations among six interlocking elements that were presented as links among nonsense letters, connections among spies with word code names (after Hayes, 1966), or airline flights among major US cities. On tests of problem solving and true-false judgments, the letters group and the words group performed nearly identically; however, relative to these two groups, the cities group performed worse or about the same on short recall problems and much better on longer problems requiring chunking of learned information. The conditions and effects of a meaningful learning context for problem solving were discussed.

16.
Mem Cognit ; 4(3): 249-55, 1976 May.
Article in English | MEDLINE | ID: mdl-21287030

ABSTRACT

A problem-like branching system describing what prizes (A through F) were awarded for particular outcomes of a tournament of games among three teams was presented to 200 subjects as either a verbal list with "go to" structure (Jump), a shortened verbal list (Short-Jump), nested verbal paragraphs with "if ... then..., else" structure (Nest), a matrix table (Example), or as diagrammatic representations of each of these. In tests of comprehension, the overall performance increased from lowest to highest as follows: Jump < Short-Jump ≃ Nest < Example, and this order was particularly strong for performance on complex questions relative to less complex questions. Jump and Short-Jump performance was relatively higher with diagrams and Example was lower with diagrams. Implications for a theory of problem representation and for development of computer programming languages were discussed.

17.
Mem Cognit ; 3(4): 356-62, 1975 Jul.
Article in English | MEDLINE | ID: mdl-21287086

ABSTRACT

When subjects were required to calculate answers for computable problems and answer questions, an interaction was found corresponding to that obtained by Kieras and Greeno (1975) from judgments of computability. With nonsense formulas, much longer times were required to identify noncomputable problems than to compute answers, with a much smaller difference when formulas consisted of meaningful concepts. The better performance on noncomputable problems and questions with meaningful formulas corroborates an interpretation that those items test the connection of algorithms with general conceptual knowledge. Finally, it was found that for relatively complex problems, solution times and time to judge computability were longer if nonsense formulas were learned in separate sets than if they were learned in a single set; however, no such effect was found with meaningful formulas. It was concluded that learning conditions influenced the integration of cognitive structure in the case of nonsense formulas, while subjects were able to adjust organization of the meaningful formulas.

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