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Anal Bioanal Chem ; 396(6): 2113-23, 2010 Mar.
Article in English | MEDLINE | ID: mdl-19960341

ABSTRACT

The detection of genetically modified (GM) materials in food and feed products is a complex multi-step analytical process invoking screening, identification, and often quantification of the genetically modified organisms (GMO) present in a sample. "Combinatory qPCR SYBRGreen screening" (CoSYPS) is a matrix-based approach for determining the presence of GM plant materials in products. The CoSYPS decision-support system (DSS) interprets the analytical results of SYBRGREEN qPCR analysis based on four values: the C(t)- and T(m) values and the LOD and LOQ for each method. A theoretical explanation of the different concepts applied in CoSYPS analysis is given (GMO Universe, "Prime number tracing", matrix/combinatory approach) and documented using the RoundUp Ready soy GTS40-3-2 as an example. By applying a limited set of SYBRGREEN qPCR methods and through application of a newly developed "prime number"-based algorithm, the nature of subsets of corresponding GMO in a sample can be determined. Together, these analyses provide guidance for semi-quantitative estimation of GMO presence in a food and feed product.


Subject(s)
Animal Feed/analysis , Food Analysis , Plants, Genetically Modified/genetics , Polymerase Chain Reaction , Algorithms , Benzothiazoles , Diamines , Fluorescent Dyes/chemistry , Food, Genetically Modified , Models, Theoretical , Organic Chemicals/chemistry , Plants, Genetically Modified/chemistry , Quinolines
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