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Nucleic Acids Res ; 31(16): 4769-78, 2003 Aug 15.
Article in English | MEDLINE | ID: mdl-12907718

ABSTRACT

A series of charge-modified, dye-labeled 2', 3'-dideoxynucleoside-5'-triphosphates have been synthesized and evaluated as reagents for dye-terminator DNA sequencing. Unlike the commonly used dye-labeled terminators, these terminators possess a net positive charge and migrate in the opposite direction to dye-labeled Sanger fragments during electrophoresis. Post-sequencing reaction purification is not required to remove unreacted nucleotide or associated breakdown products prior to electrophoresis. Thus, DNA sequencing reaction mixtures can be loaded directly onto a separating medium such as a sequencing gel. The charge-modified nucleotides have also been shown to be more efficiently incorporated by a number of DNA polymerases than regular dye-labeled dideoxynucleotide terminators or indeed normal dideoxynucleoside-5'-triphosphates.


Subject(s)
DNA-Directed DNA Polymerase/metabolism , Dideoxynucleosides/chemistry , Lysine/analogs & derivatives , Nucleotides/metabolism , Sequence Analysis, DNA/methods , Base Sequence , Chromatography, High Pressure Liquid/methods , Coloring Agents/chemistry , DNA/chemistry , DNA/genetics , Lysine/chemistry , Molecular Sequence Data , Molecular Structure , Nucleotides/chemistry , Nucleotides/genetics , Reproducibility of Results , Sensitivity and Specificity
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