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1.
Phys Sportsmed ; 49(2): 207-213, 2021 05.
Article in English | MEDLINE | ID: mdl-32777964

ABSTRACT

OBJECTIVE: Jockeys compete in a sport, horseracing, renowned for its physical and psychological demands. Previous research has identified that common mental disorders (CMDs) may be prevalent among this unique population of athletes. The aim of the present study was to further explore the prevalence of CMDs among jockeys and to test for associations with potential risk factors. METHODS: An anonymous survey was distributed to professional jockey online. Self-report screening tools for four CMDs (psychological distress, depression, generalized anxiety, and adverse alcohol use) were included alongside predictor variables from questionnaires assessing for burnout, career satisfaction, social support, and the contemplation of retirement. Binary logistic regression was used to explore associations between CMDs (present versus not present) and risk factors. Eighty-four professional jockeys completed the questionnaire (response rate = 52%). RESULTS: In total, 79% of jockeys met the threshold for at least one CMD. Prevalence (%) of CMD varied as follows: adverse alcohol (61%), depression (35%), generalized anxiety (27%), and psychological distress (19%). Burnout, career (dis)satisfaction, lower levels of social support, and the contemplation of retirement increased the odds of meeting the criteria for CMDs. CONCLUSION: The findings indicate that jockeys report CMD symptoms at comparable rates to athletes in other sports. The study was the first to highlight potential risk factors as predictors of CMDs among jockeys, including burnout, career satisfaction, and the current contemplation of retirement. Screening tools for the risk factors demonstrated may, therefore, provide useful in the early identification of CMDs among jockeys. The development of jockey-specific assessment tools, education programmes, and interventions may help better understand and support the mental health of jockeys.


Subject(s)
Depression , Mental Disorders , Cross-Sectional Studies , Humans , Mental Disorders/epidemiology , Prevalence , Risk Factors
2.
Oncogenesis ; 6(10): e388, 2017 10 09.
Article in English | MEDLINE | ID: mdl-28991260

ABSTRACT

Triple negative breast cancer (TNBC) is an aggressive subtype with relatively poor clinical outcomes and limited treatment options. Chemotherapy, while killing cancer cells, can result in the generation of highly chemoresistant therapeutic induced senescent (TIS) cells that potentially form stem cell niches resulting in metastases. Intriguingly, senescent cells release significantly more extracellular vesicles (EVs) than non-senescent cells. Our aim was to profile EVs harvested from TIS TNBC cells compared with control cells to identify a potential mechanism by which TIS TNBC cells maintain survival in the face of chemotherapy. TIS was induced and confirmed in Cal51 TNBC cells using the chemotherapeutic paclitaxel (PTX) (Taxol). Mass spectrometry (MS) analysis of EVs harvested from TIS compared with control Cal51 cells was performed using Ingenuity Pathway Analysis and InnateDB programs. We demonstrate that TIS Cal51 cells treated with 75 nM PTX for 7 days became senescent (senescence-associated ß-galactosidase (SA-ß-Gal) positive, Ki67-negative, increased p21 and p16, G2/M cell cycle arrest) and released significantly more EVs (P=0.0002) and exosomes (P=0.0007) than non-senescent control cells. Moreover, TIS cells displayed an increased expression of the multidrug resistance protein 1/p-glycoprotein. MS analysis demonstrated that EVs derived from senescent Cal51 cells contained 142 proteins with a significant increased fold change compared with control EVs. Key proteins included ATPases, annexins, tubulins, integrins, Rabs and insoluble senescence-associated secretory phenotype (SASP) factors. A fluorescent analogue of PTX (Flutax-2) allowed appreciation of the removal of chemotherapy in EVs from senescent cells. Treatment of TIS cells with the exosome biogenesis inhibitor GW4869 resulted in reduced SA-ß-Gal staining (P=0.04). In summary, this study demonstrates that TIS cells release significantly more EVs compared with control cells, containing chemotherapy and key proteins involved in cell proliferation, ATP depletion, apoptosis and the SASP. These findings may partially explain why cancer senescent cells remain viable despite chemotherapeutic challenge.

3.
Int J Sports Med ; 36(12): 968-73, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26212243

ABSTRACT

The long-term implications of making-weight daily on musculoskeletal health and functioning of the kidney and liver remain unknown. This study aimed to investigate musculoskeletal health and kidney and liver function in a group of retired jockeys. 28 retired male jockeys (age 50-70 years) provided fasting blood samples for markers of bone metabolism and kidney and liver function. A dual-energy x-ray absorptiometry (DXA) scan was performed for the assessment of bone mineral density (BMD). Established reference ranges were used for interpretation of results. Comparisons were made between retired jockeys based on the professional racing licence held: Flat, National Hunt or Dual. Mean whole-body osteopenia was reported, with no differences between groups. Bone markers, micronutrients, electrolytes and associated hormones, and markers for kidney and liver function were within clinical normative ranges. No differences existed between groups. Results indicate the retired jockeys in this study do not demonstrate compromised bone health or kidney and liver function. However, the retired jockeys may not have undergone chronic weight cycling in the extreme manner evident in present-day jockeys, indicating the next generation of jockeys may face more of a problem. Jockeys should be tracked longitudinally throughout their racing career and beyond.


Subject(s)
Bone and Bones/metabolism , Kidney/physiology , Liver/physiology , Sports/physiology , Weight Loss , Aged , Animals , Biomarkers/blood , Bone Density , Energy Intake/physiology , Horses , Humans , Life Style , Male , Middle Aged , Muscle, Skeletal/physiology , Prospective Studies
4.
J Microbiol Methods ; 94(3): 199-204, 2013 Sep.
Article in English | MEDLINE | ID: mdl-23811208

ABSTRACT

Bovine venereal campylobacter infection, caused by Campylobacter fetus venerealis, is of significant economic importance to the livestock industry. Unfortunately, the successful detection and discrimination of C. fetus venerealis from C. fetus fetus continue to be a limitation throughout the world. There are several publications warning of the problem with biotyping methods as well as with recent molecular based assays. In this study, assessed on 1071 isolates, we report on the successful development of two Real Time SYBR® Green PCR assays that will allow for the detection and discrimination of C. fetus fetus and C. fetus venerealis. The sensitivity reported here for the C. fetus (CampF4/R4) and the C. fetus venerealis (CampF7/R7) specific PCR assays are 100% and 98.7% respectively. The specificity for these same PCR assays are 99.6% and 99.8% respectively.


Subject(s)
Campylobacter Infections , Campylobacter fetus , Molecular Typing/methods , Real-Time Polymerase Chain Reaction/methods , Animals , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Campylobacter fetus/classification , Campylobacter fetus/genetics , Campylobacter fetus/isolation & purification , Cattle , Fluorescent Dyes , Sensitivity and Specificity , Sheep
6.
Osteoporos Int ; 21(3): 521-5, 2010 Mar.
Article in English | MEDLINE | ID: mdl-19271097

ABSTRACT

SUMMARY: Professional jockeys are routinely exposed to high impact trauma and sustain fractures frequently. We found that jockeys restrict their caloric intake in order to maintain regulation weights, and that bone turnover is high. There are significant health and safety implications for the racing industry. INTRODUCTION: Professional jockeys routinely sustain fractures from high impact falls. Jockeys maintain a low percentage body fat and a low body mass index (BMI) to achieve low weight targets in order to race. We evaluated dietary habits and bone metabolism in jockeys. METHODS: Bone mineral density (BMD) was measured in 27 male jockeys of the 144 jockeys licensed in Ireland. Fourteen (52%) had BMD T score below -1.0, of whom 12 consented to clinical review, nutritional survey, endocrine studies, and bone turnover markers (BTM). BTM were compared to age- and sex-matched controls (n = 16). RESULTS: BMI was 20.6 +/- 1.7 kg/m(2); previous fracture frequency was 3.2 +/- 2.0 per rider. All had normal endocrine axes. The jockeys' diet as determined by a 7-day dietary recall was deficient in energy, calcium, and vitamin D intake. Compared with the control group, the jockey group had evidence of increased bone turnover. CONCLUSIONS: A substantial proportion of the professional jockeys in Ireland have low-normal BMD, low BMI, and high bone turnover that may result from weight and dietary restrictions. These factors seem to have a deleterious effect on their bone health and predispose the jockeys to a high fracture risk that should be remediated.


Subject(s)
Bone Diseases, Metabolic/etiology , Bone and Bones/metabolism , Occupational Diseases/etiology , Sports/physiology , Adult , Body Mass Index , Bone Density/physiology , Bone Diseases, Metabolic/physiopathology , Case-Control Studies , Diet/adverse effects , Feeding Behavior , Humans , Male , Occupational Diseases/physiopathology , Young Adult
7.
Eur J Surg Oncol ; 30(5): 469-74, 2004 Jun.
Article in English | MEDLINE | ID: mdl-15135471

ABSTRACT

BACKGROUND: The identification of a second estrogen receptor (ER-beta) has significant implications for therapeutic strategy in breast cancer management arising from the potential agonist effect of Tamoxifen at estrogen receptor sites and as such, antiestrogen therapy may be inappropriate in patients with a dominance of ER-beta. METHODS: To determine the proportion of breast cancer patients who may be so at risk, we developed a novel multiplexed RT-PCR technique to establish the relative ER-alpha and ER-beta levels in 53 primary breast cancers, 11 normal breast tissues and six cell lines. We further assessed the prognostic significance of receptor status relative to the Nottingham prognostic index (NPI). The ER-alpha and ER-beta status was also determined by immunohistochemistry using previously published and 'in-house' scoring systems. RESULTS: Using RT-PCR analysis, 46 tumours were hormone receptor positive (ER+) with 42 displaying ER-alpha predominance. Comparison with immunohistochemistry demonstrated 44/53 (ER-alpha) and 27/50 (ER-beta) concordance rates. There was no significant difference in the NPI between ER-alpha and ER-beta predominant cohorts or between ER+ and ER- cohorts. CONCLUSION: This study identifies the existence of a subgroup of ER+ patients in whom Tamoxifen therapy may be inappropriate and has significant implications for adjuvant therapy of primary breast cancer.


Subject(s)
Biomarkers, Tumor/genetics , Breast Neoplasms/genetics , Carcinoma, Ductal, Breast/genetics , Carcinoma, Lobular/genetics , Receptors, Estrogen/genetics , Adult , Aged , Aged, 80 and over , Breast Neoplasms/epidemiology , Carcinoma, Ductal, Breast/epidemiology , Carcinoma, Lobular/epidemiology , Estrogen Receptor alpha , Estrogen Receptor beta , Female , Gene Expression Profiling , Humans , Immunohistochemistry , Middle Aged , Prospective Studies , Reverse Transcriptase Polymerase Chain Reaction , Risk Factors , Women's Health
8.
Vet Microbiol ; 80(3): 201-12, 2001 Jun 06.
Article in English | MEDLINE | ID: mdl-11337136

ABSTRACT

Hybridisation of PCR fragments with fluorogenic probes specific for pathotype allowed an estimation of pathogenicity of Newcastle disease virus (NDV) isolates using a modified TaqMan procedure. Six probes were used, designed to recognise nucleotide sequences in the fusion protein gene sequence corresponding to the precursor protein F0 cleavage site of both virulent and avirulent viruses. Forty-three of the 45 isolates tested, including 18 examined in a blind study were pathotyped successfully and rapidly, with close correlation between cleavage site nucleotide sequences, TaqMan results and intracerebral pathogenicity index (ICPI) values. One isolate, which could not be pathotyped by nucleotide sequencing, was shown using the TaqMan system to be a mixture of virulent and avirulent NDV. The results of this study suggest that using this modified TaqMan protocol, the likely virulence of most ND isolates can be determined rapidly and reproducibly.


Subject(s)
Chickens/virology , Newcastle disease virus/pathogenicity , Animals , Chick Embryo , Fluorescent Dyes/chemistry , Newcastle Disease , Newcastle disease virus/chemistry , Newcastle disease virus/genetics , Poultry Diseases/diagnosis , Poultry Diseases/virology , RNA, Viral/chemistry , RNA, Viral/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction/veterinary , Sequence Analysis, DNA , Specific Pathogen-Free Organisms , Spectrometry, Fluorescence/veterinary , Virulence
9.
Vet Microbiol ; 77(1-2): 71-81, 2000 Nov 15.
Article in English | MEDLINE | ID: mdl-11042401

ABSTRACT

Six laboratories participated in a study to compare the sensitivity and specificity of RT-PCR tests for the detection of classical swine fever virus (CSFV). Sets of coded samples were prepared by serial dilution of positive samples and then distributed to each of the laboratories. One set comprised 25 samples of random primed cDNA, synthesised from viral RNA representative of different pestiviruses. The other set comprised samples of blood and serum obtained from virus-free or CSFV-infected pigs. Each laboratory tested the samples using PCR/RT-PCR according to a set of standardised protocols that specified the exact conditions and requirements for inclusion of control samples. Two types of test were evaluated. One amplified a part of the 5'-non coding region of the pestivirus genome by means of a closed, one-tube RT-nested PCR. The other amplified a part of the NS5B gene using non-nested RT-PCR. The results of the laboratories were compared with one another, and with those obtained earlier when similar samples were tested by the same laboratories using non-standardised methods [Paton et al., Classical swine fever virus: a ring test to evaluate RT-PCR detection methods, Vet. Microbiol., in press]. Standardisation of the protocols resulted in a more consistent test sensitivity. Three laboratories avoided significant false positive results. Others that did not, could nevertheless recognise that test specificity was inadequate from the results obtained with the control samples. Minimum requirements for the inclusion of adequate controls and periodic proficiency testing are proposed.


Subject(s)
Classical Swine Fever Virus/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction/veterinary , Animals , Cells, Cultured , Classical Swine Fever/diagnosis , Classical Swine Fever Virus/genetics , Diarrhea Viruses, Bovine Viral/genetics , Diarrhea Viruses, Bovine Viral/isolation & purification , False Positive Reactions , RNA, Viral/analysis , Reproducibility of Results , Reverse Transcriptase Polymerase Chain Reaction/standards , Swine
10.
Vet Microbiol ; 73(2-3): 137-57, 2000 Apr 13.
Article in English | MEDLINE | ID: mdl-10785324

ABSTRACT

Three regions of the classical swine fever virus (CSFV) genome that have been widely sequenced were compared with respect to their ability to discriminate between isolates and to segregate viruses into genetic groups. Sequence data-sets were assembled for 55 CSFVs comprising 150 nucleotides of the 5' non-translated region, 190 nucleotides of the E2 envelope glycoprotein gene and 409 nucleotides of the NS5B polymerase gene. Phylogenetic analysis of each data-set revealed similar groups and subgroups. For closely related viruses, the more variable or larger data-sets gave better discrimination, and the most reliable classification was obtained with sequence data from the NS5B region. No evidence was found for intertypic recombination between CSFVs. A larger data-set was also analysed comprising 190 nucleotides of E2 sequence from 100 CSFVs from different parts of the world, in order to assess the extent and global distribution of CSFV diversity. Additional groups of CSFV are evident from Asia and the nomenclature of Lowings et al. (1996) [Lowings, P., Ibata, G., Needham, J., Paton, D., 1996. J. Gen. Virol. 77, 1311-1321] needs to be updated to accommodate these. A tentative assignment, adapting rather than overturning the previous nomenclature divides CSF viruses into three groups with three or four subgroups: 1.1, 1.2, 1.3; 2.1, 2.2, 2.3; 3.1, 3.2, 3.3, 3.4. The expanding data-base of CSFV sequences should improve the prospects of disease tracing in the future, and provide a basis for a standardised approach to ensure that results from different laboratories are comparable.


Subject(s)
Classical Swine Fever Virus/genetics , Genetic Techniques/standards , Animals , Classical Swine Fever/epidemiology , Classical Swine Fever/transmission , Classical Swine Fever/virology , Databases, Factual , Genetic Variation , Genotype , Phylogeny , Polymerase Chain Reaction/veterinary , Reference Values , Swine
11.
Vet Microbiol ; 73(2-3): 159-74, 2000 Apr 13.
Article in English | MEDLINE | ID: mdl-10785325

ABSTRACT

Six laboratories participated in an exercise to compare the sensitivity and specificity of RT-PCR tests for the detection of classical swine fever virus (CSFV). Two sets of coded samples were prepared by serial dilution of positive samples and then distributed to each of the laboratories. One set comprised 34 samples of random primed cDNA. These had been synthesised from viral RNA representative of seven different genetic subtypes of CSFV. The other set comprised 40 clinical samples containing tonsil, spleen, whole blood or serum from a pig that had been experimentally infected with CSFV. Each laboratory tested the samples using one or more PCR/RT-PCR tests that they were accustomed to using. The methods and results of the laboratories were compared with one another. The RT-PCR results obtained from testing the clinical samples were also compared with those obtained by virus isolation and antigen ELISA.ELISA. Both RT-PCR and RT-nested PCR appeared to give some false positive results. Several of the PCR tests appear suitable in terms of specificity and sensitivity. Further trials are necessary to compare results when the same test is performed by different laboratories, and to show that improved control procedures can eliminate problems due to false positive reactions.A limited comparison of extraction and reverse transcription procedures showed similar results in each of three participating laboratories, even though the methods were not standardised.


Subject(s)
Classical Swine Fever Virus/isolation & purification , Polymerase Chain Reaction/veterinary , DNA, Viral/analysis , Enzyme-Linked Immunosorbent Assay/veterinary , Laboratories/standards , Polymerase Chain Reaction/methods , Polymerase Chain Reaction/standards , Sensitivity and Specificity
12.
Cancer Res ; 59(21): 5449-51, 1999 Nov 01.
Article in English | MEDLINE | ID: mdl-10554015

ABSTRACT

The human PEG1 gene is a newly identified imprinted gene on 7q32. Genetic aberrations of this chromosomal region are often detected in invasive breast carcinomas. In this study, we show monoallelic PEG1 expression in normal breast tissue, indicating the presence of a functional imprint, and more importantly, we demonstrate loss of imprinting (LOI) in all of seven informative invasive breast carcinomas. In contrast to this, in one case of atypical ductal hyperplasia (ADH) found in residual breast, imprinting was maintained. This raises the possibility that aberrant imprinting of PEG1 may be involved in the progression from hyperplasia to invasive breast cancer.


Subject(s)
Breast Neoplasms/genetics , Genomic Imprinting , Proteins/genetics , Alleles , Chromosomes, Human, Pair 7 , Female , Gene Expression Regulation, Developmental , Gene Expression Regulation, Neoplastic , Humans , Loss of Heterozygosity , Models, Statistical , Neoplasm Invasiveness/genetics , Polymorphism, Genetic , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction
13.
Vet Microbiol ; 69(4): 227-37, 1999 Sep 29.
Article in English | MEDLINE | ID: mdl-10535769

ABSTRACT

Using RNA purified directly from stored clinical specimens, a collection of 62 pestiviruses were typed by RT-PCR and sequencing within the 5'-untranslated region of the genome. All the specimens had been obtained in 1966/1967 from diary cattle in England and Wales. Eight further pestiviruses, grown in cell culture, were characterised in the same way. Seven of these viruses were representatives of a panel of British isolates, obtained from cattle ten years before. The eighth was the virus used in a British bovine viral diarrhoea (BVD) vaccine. Most of the viruses were genetically unique and were of BVDV type Ia. One recent isolate was BVDV type Ib, two others were intermediate between Ia and Ib. No BVDV type II or border disease virus (BDV) isolates were found. There was no overall association between geographical and phylogenetic clustering, suggesting long-distance virus dispersal, presumably via trading of infected cattle. The sequences of the recently obtained cattle viruses were very similar or, in one case, identical to the older isolates in the region studied. Their close similarity to some previously characterised pestiviruses from British sheep suggests that a common pool of BVDV Ia is shared by these two livestock species, although another pestivirus--BVDV--is confined to sheep. The British cattle viruses were mostly distinct from continental European isolates, but more similar to type Ia isolates from North American cattle.


Subject(s)
5' Untranslated Regions/genetics , Bovine Virus Diarrhea-Mucosal Disease/virology , Diarrhea Viruses, Bovine Viral/genetics , 5' Untranslated Regions/chemistry , Animals , Antibodies, Monoclonal , Bovine Virus Diarrhea-Mucosal Disease/epidemiology , Cattle , DNA Primers/chemistry , DNA, Viral/chemistry , Diarrhea Viruses, Bovine Viral/classification , Electrophoresis, Agar Gel , Enzyme-Linked Immunosorbent Assay/veterinary , Immunoenzyme Techniques/veterinary , Phylogeny , Prevalence , RNA, Viral/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction/veterinary , Sequence Analysis, DNA , United Kingdom/epidemiology , Wales/epidemiology
14.
Arch Virol ; 144(4): 763-70, 1999.
Article in English | MEDLINE | ID: mdl-10365166

ABSTRACT

Analyses of transmissible gastroenteritis virus (TGEV) and porcine respiratory coronavirus (PRCV) isolates have suggested that tropism and pathogenicity are influenced by the spike protein and ORF 3. In general, enteric viruses (TGEV) have been shown to contain intact spike and ORF 3 genes, whilst respiratory isolates (PRCV) have major deletions within both regions. Virulence has been correlated to a functional ORF 3. Here, sequence analysis of a recent isolate of virulent TGEV, revealed a variant with an intact spike gene, but a large deletion in ORF 3a. This suggests that ORF 3a is not essential for enteric virulence.


Subject(s)
Coronavirus/genetics , Membrane Glycoproteins/genetics , Open Reading Frames , Transmissible gastroenteritis virus/genetics , Transmissible gastroenteritis virus/pathogenicity , Viral Envelope Proteins/genetics , Animals , Base Sequence , Coronavirus/classification , DNA Primers , Gastroenteritis, Transmissible, of Swine/transmission , Genetic Variation , Membrane Glycoproteins/metabolism , Molecular Sequence Data , Phylogeny , Polymerase Chain Reaction , Sequence Deletion , Spike Glycoprotein, Coronavirus , Swine , Transmissible gastroenteritis virus/physiology , United Kingdom , Viral Envelope Proteins/metabolism , Virulence
15.
J Virol Methods ; 79(1): 85-95, 1999 Apr.
Article in English | MEDLINE | ID: mdl-10328538

ABSTRACT

An assay was developed in which reverse transcription (RT), nested polymerase chain reaction (PCR) and accumulation of amplicon-specific fluorescence could take place in a single, closed reaction tube. The assay, which was classical swine fever virus RNA-specific, was compared with other methods for detection of this virus, including various RT-PCR configurations, virus isolation and ELISA. The new method was very sensitive, and less prone to giving false positive results compared to nested PCR carried out in separate reaction tubes. Substitution of different fluorescent probes resulted in specific tests for border disease virus and for bovine viral diarrhoea type II (BVD-II), and one that could detect all pestiviruses except for some BVD-II viruses.


Subject(s)
Fluorescent Dyes , Pestivirus/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction/methods , Animals , Base Sequence , Cattle , Classical Swine Fever/virology , Classical Swine Fever Virus/genetics , Classical Swine Fever Virus/isolation & purification , Diarrhea Viruses, Bovine Viral/genetics , Diarrhea Viruses, Bovine Viral/isolation & purification , Molecular Sequence Data , Nucleic Acid Probes , Pestivirus/genetics , Pestivirus Infections/virology , RNA, Viral/analysis , Species Specificity , Swine , Swine Diseases/virology , Taq Polymerase
16.
J Virol Methods ; 72(2): 125-35, 1998 Jun.
Article in English | MEDLINE | ID: mdl-9694320

ABSTRACT

Detection of classical swine fever virus (CSFV) and its discrimination from other pestiviruses can be achieved by virus isolation (VI) in cell cultures, antigen detection, or molecular analysis. To simplify the latter, a 5'-nuclease assay (TaqMan) was developed for the rapid and specific detection of CSFV with the minimum of downstream PCR processing. A pair of 5'-non-coding region, panpestivirus-specific PCR primers were assessed in a one-step reverse transcription-PCR with each of 36 diverse pestiviruses. The PCR products were subsequently reamplified, in conjunction with a CSFV-specific fluorogenic probe, in a nested-PCR with a second set of panpestivirus PCR primers. During nested PCR, when the target of interest was present, the CSFV probe annealed to the amplicon between the forward and reverse primers and was subsequently cleaved via the 5'-3' nucleolytic activity of the DNA polymerase resulting in the release of the fluorescent reporter dye. Each PCR tube was then placed directly into a luminescence spectrometer to monitor for any increase in fluorescence due to cleavage of the probe. This assay detected representatives of all genetic sub-groups of CSFV, but gave negative results for other pestiviruses. A preliminary assessment showed that the method could be used to detect CSFV RNA extracted from infected pig blood with a sensitivity greater than that of VI.


Subject(s)
Classical Swine Fever Virus/isolation & purification , Classical Swine Fever/virology , Polymerase Chain Reaction/veterinary , Swine/virology , Age Factors , Animals , Cell Culture Techniques , Classical Swine Fever/blood , Classical Swine Fever Virus/classification , Classical Swine Fever Virus/genetics , Enzyme-Linked Immunosorbent Assay/veterinary , Kidney , Polymerase Chain Reaction/methods , RNA, Viral/isolation & purification , Sensitivity and Specificity , Swine/blood , Time Factors
17.
J Virol Methods ; 66(2): 303-9, 1997 Jul.
Article in English | MEDLINE | ID: mdl-9255741

ABSTRACT

An RT-PCR method was developed that amplified genetic material from the 5' end of the S protein gene of both transmissible gastroenteritis virus (TGEV) and porcine respiratory coronavirus (PRCV), but discriminated between the two by the size of the product generated. A number of restriction endonuclease enzymes were assessed for recognition of the amplicons so produced. The assay was shown to detect viral RNA from all of the 26 different TGEV and PRCV isolates examined, covering a period from 1946 to 1996. Detection of TGEV in clinical specimens was possible using a spin column method to extract RNA and sensitivity was compared to virus isolation and antigen detection ELISA. The method could provide a means of confirming positive results from immunological screening tests such as FAT and ELISA, reducing the need for virus isolation and convalescent serology.


Subject(s)
Coronavirus Infections/veterinary , Coronavirus/isolation & purification , Gastroenteritis, Transmissible, of Swine/diagnosis , Polymerase Chain Reaction/methods , Transmissible gastroenteritis virus/isolation & purification , Animals , Coronavirus/genetics , Coronavirus Infections/diagnosis , Diagnosis, Differential , Feces/virology , Intestine, Small/virology , Membrane Glycoproteins/genetics , Molecular Sequence Data , RNA, Viral/analysis , Sensitivity and Specificity , Serial Passage , Spike Glycoprotein, Coronavirus , Swine , Transmissible gastroenteritis virus/genetics , Viral Envelope Proteins/genetics
18.
J Virol ; 69(12): 7601-5, 1995 Dec.
Article in English | MEDLINE | ID: mdl-7494267

ABSTRACT

Of the 55 point mutations which distinguish the type 1 poliovirus vaccine strain (Sabin 1) from its neurovirulent progenitor (P1/Mahoney), two have been strongly implicated by previous studies as determinants of the attenuation phenotype. A change of an A to a G at position 480, located within the 5' noncoding region, has been suggested to be the major attenuating mutation, analogous to the mutations at positions 481 and 472 in poliovirus types 2 and 3, respectively. In addition, the change of a U to a C at position 6203, resulting in an amino acid change in the polymerase protein 3D, has also been implicated as a determinant of attenuation, albeit to a lesser extent. To assess the contributions of these mutations to attenuation and temperature sensitivity, reciprocal changes were generated at these positions in infectious cDNA clones of Sabin 1 and P1/Mahoney. Assays in tissue culture and primates indicated that the two mutations make some contribution to the temperature sensitivity of the Sabin 1 strain but that neither is a strong determinant of attenuation.


Subject(s)
Nucleic Acid Conformation , Point Mutation , Poliovirus Vaccine, Oral , Poliovirus/genetics , RNA, Viral/chemistry , RNA, Viral/genetics , Vaccines, Attenuated , Cell Line , Cloning, Molecular , Cytosine , DNA, Complementary , Genome, Viral , Guanine , Humans , Phenotype , Poliovirus/immunology , Poliovirus/pathogenicity , Tumor Cells, Cultured , Uracil , Virulence/genetics
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