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1.
J Med Entomol ; 52(4): 699-704, 2015 Jul.
Article in English | MEDLINE | ID: mdl-26335477

ABSTRACT

The outbreak of disease caused by chikungunya virus (CHIKV) in 2006 and the recent spread of this virus to the Americas in 2013 indicate the potential for this virus to spread and cause significant disease. However, there are currently no accurate and reliable field-usable, diagnostic methods to provide critical, real-time information for early detection of CHIKV within the vector populations in order to implement appropriate vector control and personal protective measures. In this article, we report the ability of an immuno-chromatographic assay developed by VecTOR Test Systems Inc. to detect CHIKV in a pool of female Aedes mosquitoes containing a single CHIKV-infected mosquito. The CHIKV dipstick assay was simple to use, did not require a cold chain, and provided clear results within 1 h. It was highly specific and did not cross-react with samples spiked with a variety of other alpha, bunya, and flaviviruses. The CHIKV assay can provide real-time critical information on the presence of CHIKV in mosquitoes to public health personnel. Results from this assay will allow a rapid threat assessment and the focusing of vector control measures in high-risk areas.


Subject(s)
Aedes/virology , Antigens, Viral/analysis , Chikungunya virus/isolation & purification , Chromatography, Affinity/methods , Virology/methods , Animals , Female , Reagent Kits, Diagnostic/virology , Sensitivity and Specificity
2.
PLoS Negl Trop Dis ; 7(8): e2349, 2013.
Article in English | MEDLINE | ID: mdl-23967358

ABSTRACT

BACKGROUND: Arthropod-borne viruses are important emerging pathogens world-wide. Viruses transmitted by mosquitoes, such as dengue, yellow fever, and Japanese encephalitis viruses, infect hundreds of millions of people and animals each year. Global surveillance of these viruses in mosquito vectors using molecular based assays is critical for prevention and control of the associated diseases. Here, we report an oligonucleotide DNA microarray design, termed ArboChip5.1, for multi-gene detection and identification of mosquito-borne RNA viruses from the genera Flavivirus (family Flaviviridae), Alphavirus (Togaviridae), Orthobunyavirus (Bunyaviridae), and Phlebovirus (Bunyaviridae). METHODOLOGY/PRINCIPAL FINDINGS: The assay utilizes targeted PCR amplification of three genes from each virus genus for electrochemical detection on a portable, field-tested microarray platform. Fifty-two viruses propagated in cell-culture were used to evaluate the specificity of the PCR primer sets and the ArboChip5.1 microarray capture probes. The microarray detected all of the tested viruses and differentiated between many closely related viruses such as members of the dengue, Japanese encephalitis, and Semliki Forest virus clades. Laboratory infected mosquitoes were used to simulate field samples and to determine the limits of detection. Additionally, we identified dengue virus type 3, Japanese encephalitis virus, Tembusu virus, Culex flavivirus, and a Quang Binh-like virus from mosquitoes collected in Thailand in 2011 and 2012. CONCLUSIONS/SIGNIFICANCE: We demonstrated that the described assay can be utilized in a comprehensive field surveillance program by the broad-range amplification and specific identification of arboviruses from infected mosquitoes. Furthermore, the microarray platform can be deployed in the field and viral RNA extraction to data analysis can occur in as little as 12 h. The information derived from the ArboChip5.1 microarray can help to establish public health priorities, detect disease outbreaks, and evaluate control programs.


Subject(s)
Culicidae/virology , Oligonucleotide Array Sequence Analysis/methods , RNA Viruses/isolation & purification , Virology/methods , Animals , RNA Viruses/classification , RNA Viruses/genetics , Thailand
3.
Am J Trop Med Hyg ; 88(2): 245-53, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23249687

ABSTRACT

Highly multiplexed assays, such as microarrays, can benefit arbovirus surveillance by allowing researchers to screen for hundreds of targets at once. We evaluated amplification strategies and the practicality of a portable DNA microarray platform to analyze virus-infected mosquitoes. The prototype microarray design used here targeted the non-structural protein 5, ribosomal RNA, and cytochrome b genes for the detection of flaviviruses, mosquitoes, and bloodmeals, respectively. We identified 13 of 14 flaviviruses from virus inoculated mosquitoes and cultured cells. Additionally, we differentiated between four mosquito genera and eight whole blood samples. The microarray platform was field evaluated in Thailand and successfully identified flaviviruses (Culex flavivirus, dengue-3, and Japanese encephalitis viruses), differentiated between mosquito genera (Aedes, Armigeres, Culex, and Mansonia), and detected mammalian bloodmeals (human and dog). We showed that the microarray platform and amplification strategies described here can be used to discern specific information on a wide variety of viruses and their vectors.


Subject(s)
Arboviruses/genetics , Arthropods/virology , Blood/virology , Oligonucleotide Array Sequence Analysis/methods , Animals , Arboviruses/isolation & purification , Arboviruses/pathogenicity , Computational Biology , Culicidae/virology , Cytochromes b/genetics , DNA, Viral/genetics , Dogs , Equidae , Flavivirus/genetics , Flavivirus/isolation & purification , Flavivirus/pathogenicity , Genes, Viral , Horses , Humans , Insect Vectors/virology , RNA, Viral/genetics , Real-Time Polymerase Chain Reaction , Thailand , Viral Nonstructural Proteins/genetics , Viral Nonstructural Proteins/metabolism
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