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1.
Environ Technol ; : 1-13, 2024 Jun 28.
Article in English | MEDLINE | ID: mdl-38940278

ABSTRACT

Covered anaerobic lagoons (CALs) are Latin America's main livestock waste treatment systems. Mexico has 680 CALs that present low biogas yields (0.05 m3 m-3 digester d-1) and low COD removal rates (< 60%). This work focused on diagnosing CAL´s low performance in dairy farms by determining and analyzing operational parameters. Seven CALs located in the main dairy basin of Mexico were analyzed. The sampling areas for each CAL were the supernatant, the active zone, settled sludge, and digester inlet and outlet. The variation of the process parameter values corroborated that CALs appeared stratified and not working as expected. The sludge zone, comprising 50-58% of total solids content and 1-15% of total CALs volume, showed an elemental compounds content suitable for organic fertilizer (340, 48, and 5 kg t-1 of C, N, and S, respectively). However, this zone contained, at least, 85% of the slowly hydrolysable material; the methanogenic potential was less than 87 mL CH4 g VS-1, and the C/N ratio ranged from 4.9 to 17, outside of the optimal range. The biogas produced did not exceed 60% of methane content and more than 3000 ppm of H2S. The sludge zone significantly influences the lagoon's dynamics since it is a nutrient sink. Furthermore, the lack of agitation is the leading cause for the low energy yield and the low removal of organic matter rate. This work provides valuable information to address the operational problems within the CALs improving our understanding that shall allow proposing reactivation alternatives.

2.
Plants (Basel) ; 12(19)2023 Sep 28.
Article in English | MEDLINE | ID: mdl-37836155

ABSTRACT

Native corn in Cherán, Michoacán, southwestern Mexico, represents a high-impact economic, social, and religious support, although its yield is low due to fungal diseases. Fungicides are mainly used for their control, but the fungi involved create resistance. The aims of this study are to determine the incidence of foliar diseases in the field, isolate the causal fungi, evaluate the in vitro effect of the essential oil of rue (Ruta graveolens) on them, and identify the secondary metabolites. The essential oil was obtained using the steam distillation technique on fresh plants. Also used was an industrial-grade chitosan, and the commercial fungicide benomyl was used as a positive control. Rue essential oil was characterized by mass spectrometry with ultra-high-performance liquid chromatography with electrospray ionization (UHPLC-ESI). The highest incidence of disease was obtained for leaf rust (35%), followed by gray leaf spot (GLS) (24%) and leaf blight (19%). Rue essential oil inhibited 100% of the mycelial growth of Coniothyrium phyllachorae and 96% of the mycelium of Exseroilum turcicum. The benomyl fungicide effectively inhibited C. phyllachorae (86 to 91%), but not E. turcicum, with the opposite effect when using chitosan by inhibiting 89 to 90% of the latter's mycelial development. The majority compound of the essential oil of R. graveolens was 2-(3-phenylprop-2-enoyl)chromen-4-one; however, fatty acids were also detected: linoleic, palmitic, and retinoic acid.

3.
Plants (Basel) ; 12(4)2023 Feb 16.
Article in English | MEDLINE | ID: mdl-36840242

ABSTRACT

Cosmos sulphureus Cav. (Asteraceae), and endemic plant of Mexico is used in herbal medicine. In this study, the phytochemical composition, phenolic content, and antioxidant activity of ethanolic and methanolic extracts from C. sulphureus leaves and flowers were determined. The phytochemical analysis showed the presence of compounds such as terpenoids, phenolic compounds, tannins, and flavonoids and the absence of alkaloids, saponins, glycosides, and anthraquinones. The experimental results showed that the extracts have high contents of phenolic, flavonoid, and condensed tannins contents. The phenolic compounds identified in the C. sulphureus extracts by high-performance thin-layer chromatography (HPTLC) include phenolic acids such as chlorogenic acid and caffeic acid as well flavonoids such as rutin and quercetin. The C. sulphureus extracts showed a relevant free radical scavenging activity, ferric-reducing antioxidant power, lipid peroxidation inhibition ability, and oxygen radical antioxidant capacity. This research highlights the phytochemical profile and antioxidant activity of phenolic compounds-rich extracts from C. sulphureus leaves and flowers.

4.
Cell Rep ; 42(2): 112100, 2023 02 28.
Article in English | MEDLINE | ID: mdl-36763500

ABSTRACT

During pre-implantation stages of mammalian development, maternally stored material promotes both the erasure of the sperm and oocyte epigenetic profiles and is responsible for concomitant genome activation. Here, we have utilized single-cell methylome and transcriptome sequencing (scM&T-seq) to quantify both mRNA expression and DNA methylation in oocytes and a developmental series of human embryos at single-cell resolution. We fully characterize embryonic genome activation and maternal transcript degradation and map key epigenetic reprogramming events in developmentally high-quality embryos. By comparing these signatures with early embryos that have undergone spontaneous cleavage-stage arrest, as determined by time-lapse imaging, we identify embryos that fail to appropriately activate their genomes or undergo epigenetic reprogramming. Our results indicate that a failure to successfully accomplish these essential milestones impedes the developmental potential of pre-implantation embryos and is likely to have important implications, similar to aneuploidy, for the success of assisted reproductive cycles.


Subject(s)
Multiomics , Semen , Animals , Humans , Male , Embryonic Development/genetics , Embryo, Mammalian/metabolism , Oocytes/metabolism , Epigenesis, Genetic , Blastocyst/metabolism , Mammals
5.
Mol Phylogenet Evol ; 173: 107517, 2022 08.
Article in English | MEDLINE | ID: mdl-35577289

ABSTRACT

Low morphological differentiation among taxa hampers their appropriate identification, basic biological studies and promotion of any conservation effort. Aiming to provide the first insight into the evolution and speciation among north-western South American members of Pimelodus, this study tested the hypothesis that Pimelodus yuma, Pimelodus grosskopfii and Pimelodus crypticus represent three independently evolving species and explored signals of interspecific hybridisation. The outcomes based on mitochondrial (cox1) and nuclear (RADseq, microsatellites and rag2) markers combined with coalescence-based and allele-frequency methods confirmed that each studied species represents an independently evolving unit. Contrary to expectations, P. yuma was found as a sister clade of P. blochii, while P. crypticus (formerly confused with P. blochii) was phylogenetically closer to P. grosskopfii. We also found strong evidence of ancient introgression (0.66-3.32 mya) between the non-sibling species P. yuma and P. grosskopfii, breaking the absence of interbreeding and the independent evolutionary trajectory among north-western South American Pimelodus during their diversification history, a pre-requisite to define species limits. However, there were non-significant values of current gene flow between them, supporting the hypothesis of full isolation.


Subject(s)
Catfishes , Rivers , Animals , Cell Nucleus/genetics , Hybridization, Genetic , Phylogeny
6.
Membranes (Basel) ; 12(1)2022 Jan 07.
Article in English | MEDLINE | ID: mdl-35054601

ABSTRACT

The concept of liquid metal membranes for hydrogen separation, based on gallium or indium, was recently introduced as an alternative to conventional palladium-based membranes. The potential of this class of gas separation materials was mainly attributed to the promise of higher hydrogen diffusivity. The postulated improvements are only beneficial to the flux if diffusion through the membrane is the rate-determining step in the permeation sequence. Whilst this is a valid assumption for hydrogen transport through palladium-based membranes, the relatively low adsorption energy of hydrogen on both liquid metals suggests that other phenomena may be relevant. In the current study, a microkinetic modeling approach is used to enable simulations based on a five-step permeation mechanism. The calculation results show that for the liquid metal membranes, the flux is limited by the dissociative adsorption over a large temperature range, and that the membrane flux is expected to be orders of magnitude lower compared to the membrane flux through pure palladium membranes. Even when accounting for the lower cost of the liquid metals compared to palladium, the latter still outperforms both gallium and indium in all realistic scenarios, in part due to the practical difficulties associated with making liquid metal thin films.

7.
World Neurosurg ; 160: e296-e306, 2022 04.
Article in English | MEDLINE | ID: mdl-35017073

ABSTRACT

BACKGROUND AND OBJECTIVE: Our study aimed to determine the ability of hematologic markers (neutrophil/lymphocyte ratio [NLR], platelet/lymphocyte ratio, and red cell distribution width [RDW]) in predicting delayed cerebral ischemia (DCI), modified Rankin Scale scores, and mortality in patients with aneurysmal subarachnoid hemorrhage (aSAH). METHODS: A retrospective observational 6-year review of medical records was conducted to identify all consecutive patients with aSAH admitted to the largest training hospital in the Philippines. Univariable and multivariable regression analyses were performed to determine the association of the biomarkers with the respective outcomes. Receiver operating characteristic curves were used to detect overall predictive accuracy. RESULTS: A total of 222 patients with aSAH were included, of whom 11.71% developed DCI. Most patients with NLR ≥5.9 subsequently died (77 vs. 52%; P = 0.03). DCI was also associated with poor functional outcomes with higher modified Rankin Scale scores (3-6) on discharge (92% vs. 49%; P < 0.01), and longer duration of hospitalization (median, 20 vs. 13 days; P = 0.01). In receiver operating characteristic analyses, the value of RDW was predictive for DCI (area under the curve, 0.70; 95% confidence interval, 0.62-0.79; P < 0.01). The values of NLR (area under the curve, 0.67; 95% CI, 0.59-0.74) potentially predict functional outcome. RDW, NLR, and their combinations were poor discriminators of mortality. CONCLUSIONS: Our study showed that some hematologic parameters analyzed could be of potential value as prognostic biomarkers in patients with aSAH. Hematologic biomarkers are widely available and practical parameters that may be of considerable clinical value in aSAH management, especially in lower-middle-income countries such as the Philippines.


Subject(s)
Brain Ischemia , Subarachnoid Hemorrhage , Biomarkers , Brain Ischemia/complications , Cerebral Infarction/complications , Humans , Retrospective Studies , Subarachnoid Hemorrhage/complications , Subarachnoid Hemorrhage/diagnosis
8.
J Stroke Cerebrovasc Dis ; 31(2): 106232, 2022 Feb.
Article in English | MEDLINE | ID: mdl-34875539

ABSTRACT

BACKGROUND AND OBJECTIVES: Young adult patients may suffer from poststroke depression (PSD) and anxiety. Few studies have evaluated these important psychiatric conditions that may lead to adverse outcomes in young adults. We aimed to determine the prevalence of PSD and anxiety as well as to identify their predictors in a population of young Filipino adults (18-49 years old). METHODS: We performed a cross-sectional epidemiologic study in the largest tertiary hospital in the Philippines. The study involved the administration of a structured survey tool and review of medical records. The Hospital Anxiety and Depression Score - Pilipino version (HADS-P) was used to screen for anxiety and depression. Multivariable logistic regression analysis was performed to determine significant socio-economic and clinical risk factors of PSD and anxiety. RESULTS: 114 young adult stroke patients were included. The prevalence of depression was 20.2% while that of anxiety was 34.2%. Significant predictors of PSD were the presence of anxiety (OR 1.84; CI 1.05-3.22), lower mRS scores (mRS 3-5 OR 5.52; 95% CI 1.09-8.03) and diabetes (OR 2.09; 95% CI 1.67-6.26). Meanwhile, significant predictors of poststroke anxiety included depression (OR 7.5; 95% CI 5.02-21.94) and dependency (Barthel Index scores 95-100; OR 0.94; 95% CI 0.89-0.99). Relationship status, educational attainment, stroke subtype and location were not found to be significant predictors of PSD and anxiety. CONCLUSION: A significant proportion of young adults suffered from depression and anxiety after stroke. Clinicians should be aware of these psychiatric conditions that influence outcomes and quality of life of young adults with stroke.


Subject(s)
Anxiety , Depression , Stroke , Adolescent , Adult , Anxiety/epidemiology , Cross-Sectional Studies , Depression/epidemiology , Humans , Middle Aged , Philippines/epidemiology , Stroke/complications , Young Adult
9.
Rev. Méd. Inst. Mex. Seguro Soc ; 59(4): 264-273, ago. 2021. graf, tab
Article in Spanish | LILACS | ID: biblio-1358343

ABSTRACT

Introducción: en México existe un 50% de pacientes metabólicamente descontrolados, por lo que en 2008 se implementó el programa de atención al paciente diabético del Instituto Mexicano del Seguro Social (DiabetIMSS), el cual utiliza estrategias para la prevención y atención integral de la población mediante sesiones educativas para lograr un control metabólico a largo plazo. Objetivo: identificar el control metabólico de los pacientes diabéticos posterior al egreso del programa DiabetIMSS. Material y métodos: estudio observacional, descriptivo, transversal, ambispectivo en 242 pacientes obtenidos por muestreo no probabilístico por cuota con diagnóstico CIE- 10 de DM2 con ≥ 1 año de egreso de DiabetIMSS. Análisis estadístico con Chi cuadrada. Resultados: grupo 1 con ≤ 2 años de egreso y grupo 2 con> 2 años. Grupo 1 con descontrol metabólico en 79% de los pacientes y grupo 2 en 81%; en ambos predominó la hiperglucemia con 64 y 57% y TA normal con 82.8 y 88.1%, respectivamente. La prevalencia de dislipidemia fue de 65.7 y 70.6% en ambos casos. La obesidad se relacionó a dislipidemia (74.4%), HTA (54.4%) e hiperglucemia (69.1%). Conclusión: se encontró mal control metabólico en pacientes diabéticos posterior al egreso de DiabetIMSS.


Background: In Mexico there are 50% patients that have metabolic decontrol so in 2008 the Program of Attention for the Diabetic Patient of the Instituto Mexicano del Seguro Social (DiabetIMSS) was implemented, that it uses strategies for prevention and integral attention for the people by educative session's to achieve a metabolic control in the long term. Objective: To identify the metabolic control of diabetic patients after ending the educational program DiabetIMSS. Material and methods: Observational, descriptive, transverse, ambispective study in 242 patients selected by nonprobabilistic sampling by quota with a diagnosis of ICD 10 of DM2 with ≥ 1 year of discharge from DiabetIMSS. Statistical analysis with Chi square. Results: Group 1 with ≤ 2 years of discharge and group 2 with > 2 years. Group 1 with metabolic decontrol in 79%, and group 2 with 81%; in both, hyperglycemia predominated with 64% and 57% and normal BP with 82.8% and 88.1% respectively. The prevalence of dyslipidemia was 65.7% and 70.6% in both cases. Obesity it´s related to dyslipidemia (74.4%), HTA (54.4%) and glycemic uncontrol (69.1%). Conclusion: Poor metabolic control was found in diabetic patients after ending DiabetIMSS.


Subject(s)
Humans , Health Strategies , Comprehensive Health Care , Diabetes Mellitus, Type 2 , Health Promotion , Patients , Cross-Sectional Studies , Patient Care , Mexico
10.
Plants (Basel) ; 10(3)2021 Mar 03.
Article in English | MEDLINE | ID: mdl-33802461

ABSTRACT

Verbesina sphaerocephala A. Gray, like other wild plants of the genus Verbesina, has been used in herbal medicine. There is information for other species of the genus related to their phenolic content, antioxidant capacity, and isolation of bioactive compounds with antimicrobial activity. However, there are no reports for V. sphaerocephala, although it has an important presence in the state of Michoacán, México. In this study, the phenolic composition, quantification of rutin, and in vitro antioxidant and antibacterial activities of methanolic extracts from V. sphaerocephala leaves and flowers were determined. The results showed that all the investigated extracts have high phenolic and flavonoid contents. The flavonoid rutin was identified in all the extracts from V. sphaerocephala by high-performance thin-layer chromatography (HPTLC). The V. sphaerocephala extracts showed scavenging activity against DPPH• and ABTS•+ radicals (IC50 and 5.83 ± 0.50 and 0.93 ± 0.01 mg/mL, respectively) as well as relevant antioxidant capacity (51.05 ± 0.36 mg of ascorbic acid/g of dry tissue). The experimental results show that V. sphaerocephala extracts possessed a strong antimicrobial activity against Escherichia coli and Staphylococcus aureus bacteria. This research indicates that V. sphaerocephala could be considered as a potential source of natural compounds from the point of ethnopharmacological usage.

11.
Plants (Basel) ; 10(5)2021 Apr 23.
Article in English | MEDLINE | ID: mdl-33922510

ABSTRACT

Three pathogenic fungi of blueberry (Vaccinium spp.) responsible for dieback disease, identified as Pestalotiopsis clavispora, Colletotrichum gloeosporioides and Lasiodiplodia pseudotheobromae, were isolated in the northwestern region of the state of Michoacán, Mexico. The mycelial growth in vitro of these fungi was inhibited by extracts from Lantana hirta, Argemone ochroleuca and Adenophyllum porophyllum, medicinal plants collected in Sahuayo, Michoacán, Mexico. The extracts showed different degrees of inhibition; the most effective were: M5L extract from L. hirta and M6LFr extract from A. ochroleuca, both of which inhibited 100% of the mycelial growth of P. clavispora and C. gloeosporioides; and M4LS extract from A. porophyllum, which inhibited 100% of the mycelial growth of the three pathogens. The extracts were fractionated by thin layer and column chromatography, and the most active fractions were analyzed by gas chromatography-mass spectrometry. The major compounds identified in L. hirta extract were Phytol and α-Sitosterol. The compounds identified in A. ochroleuca were Toluene and Benzene, 1,3-bis(3-phenoxyphenoxy)-. In A. porophyllum, the compound identified was Hexanedioic acid, bis(2-ethylhexyl) ester. These results show the potential of L. hirta, A. ochroleuca and A. porophyllum as a source of antifungal compounds.

12.
Rev Med Inst Mex Seguro Soc ; 59(4): 264-273, 2021 08 01.
Article in Spanish | MEDLINE | ID: mdl-35006658

ABSTRACT

Background: Background: In Mexico there are 50% patients that have metabolic decontrol so in 2008 the Program of Attention for the Diabetic Patient of the Instituto Mexicano del Seguro Social (DiabetIMSS) was implemented, that it uses strategies for prevention and integral attention for the people by educative session's to achieve a metabolic control in the long term. Objective: To identify the metabolic control of diabetic patients after ending the educational program DiabetIMSS. Material and methods: Observational, descriptive, transverse, ambispective study in 242 patients selected by nonprobabilistic sampling by quota with a diagnosis of ICD 10 of DM2 with ≥ 1 year of discharge from DiabetIMSS. Statistical analysis with Chi square. Results: Group 1 with ≤ 2 years of discharge and group 2 with > 2 years. Group 1 with metabolic decontrol in 79%, and group 2 with 81%; in both, hyperglycemia predominated with 64% and 57% and normal BP with 82.8% and 88.1% respectively. The prevalence of dyslipidemia was 65.7% and 70.6% in both cases. Obesity it´s related to dyslipidemia (74.4%), HTA (54.4%) and glycemic uncontrol (69.1%). Conclusion: Poor metabolic control was found in diabetic patients after ending DiabetIMSS.


Introducción: en México existe un 50% de pacientes metabólicamente descontrolados, por lo que en 2008 se implementó el programa de atención al paciente diabético del Instituto Mexicano del Seguro Social (DiabetIMSS), el cual utiliza estrategias para la prevención y atención integral de la población mediante sesiones educativas para lograr un control metabólico a largo plazo. Objetivo: identificar el control metabólico de los pacientes diabéticos posterior al egreso del programa DiabetIMSS. Material y métodos: estudio observacional, descriptivo, transversal, ambispectivo en 242 pacientes obtenidos por muestreo no probabilístico por cuota con diagnóstico CIE10 de DM2 con ≥ 1 año de egreso de DiabetIMSS. Análisis estadístico con Chi cuadrada. Resultados: grupo 1 con ≤ 2 años de egreso y grupo 2 con > 2 años. Grupo 1 con descontrol metabólico en 79% de los pacientes y grupo 2 en 81%; en ambos predominó hiperglucemia con 64 y 57% y TA normal con 82.8 y 88.1%, respectivamente. La prevalencia de dislipidemia fue de 65.7 y 70.6% en ambos casos. La obesidad se relacionó a dislipidemia (74.4%), HTA (54.4%) e hiperglucemia (69.1%). Conclusión: se encontró mal control metabólico en pacientes diabéticos posterior al egreso de DiabetIMSS.


Subject(s)
Diabetes Mellitus, Type 2 , Hyperglycemia , Blood Glucose , Humans , Mexico , Patient Discharge , Prevalence
13.
Reprod Sci ; 28(2): 603-613, 2021 02.
Article in English | MEDLINE | ID: mdl-33150486

ABSTRACT

Cryopreservation of immature testicular tissue is an experimental strategy for the preservation of fertility in prepubertal boys that will be subjected to a gonadotoxic onset, as is the case of oncologic patients. Therefore, the objective of this study was to assess the impact of chemotherapeutic treatments on the testicular histologic phenotype in prepubertal patients. A total of 56 testicular tissue samples from pediatric patients between 0 and 16 years old (28 with at least one previous chemotherapeutic onset and 28 untreated controls) were histologically analyzed and age-matched compared. At least two 5-µm sections from testis per patient separated by a distance of 100 µm were immunostained for the germ cell marker VASA, the spermatogonial markers UTF1, PLZF, UCHL1, and SALL4, the marker for proliferative cells KI67, and the Sertoli cell marker SOX9. The percentage of tubule cross-sections positive for each marker and the number of positive cells per tubule cross-section were determined and association with the cumulative dose received of each chemotherapeutic drug was statistically assessed. Results indicated that alkylating agents, cyclophosphamide and ifosfamide, but also the antimetabolite cytarabine and asparaginase were associated with a decreased percentage of positive tubules and a lower number of positive cells per tubule for the analyzed markers. Our results provide new evidences of the potential of chemotherapeutic agents previously considered to have low gonadotoxic effects such as cytarabine and asparaginase to trigger a severe testicular phenotype, hampering the potential success of future fertility restoration in experimental programs of fertility preservation in prepubertal boys.


Subject(s)
Antineoplastic Agents/adverse effects , Asparaginase/adverse effects , Cyclophosphamide/adverse effects , Cytarabine/adverse effects , Fertility/drug effects , Ifosfamide/adverse effects , Infertility, Male/chemically induced , Spermatozoa/drug effects , Testis/drug effects , Adolescent , Age Factors , Belgium , Case-Control Studies , Child , Child, Preschool , DEAD-box RNA Helicases/metabolism , Fertility Preservation , Humans , Infertility, Male/metabolism , Infertility, Male/pathology , Infertility, Male/physiopathology , Ki-67 Antigen/metabolism , Male , Nuclear Proteins/metabolism , Pilot Projects , Promyelocytic Leukemia Zinc Finger Protein/metabolism , Risk Assessment , SOX9 Transcription Factor/metabolism , Spain , Spermatozoa/metabolism , Spermatozoa/pathology , Testis/metabolism , Testis/pathology , Testis/physiopathology , Trans-Activators/metabolism , Transcription Factors/metabolism , Ubiquitin Thiolesterase/metabolism
14.
Neotrop. ichthyol ; 19(1): e200053, 2021. tab, graf
Article in English | LILACS, VETINDEX | ID: biblio-1154971

ABSTRACT

The Neotropical freshwater catfish Pseudopimelodus atricaudus and Pseudopimelodus magnus are two recently discovered species endemic to the Colombian Magdalena-Cauca River basin. In this study, a set of 13 microsatellite loci were developed by using next generation sequence technology to assess the genetic diversity and population structure in P. atricaudus and test for cross-species amplification in P. magnus. Both species exhibited high genetic diversity (P. atricaudus: Na: 9.000 - 9.769 alleles/locus, Ho: 0.760 - 0.804, HE: 0.804 - 0.840; P. magnus: Na: 12.8 - 5.4 alleles/locus, Ho: 0.638 - 0.683, HE: 0.747 - 0.755) compared to the mean levels of genetic diversity reported for Neotropical Siluriformes, and lack of genetic differentiation among sampling sites within the Cauca River (P. atricaudus: F'ST=0.013 - 0.017, P > 0.05, D'est= -0.004 - 0.023, P > 0.05; P. magnus: F'ST= 0.031, P= 0.055; D'est= 0.045, P= 0.058). This work is the first insight on the diversity and the population genetics of species of the family Pseudopimelodidae and provides a framework to further population genetic and conservation analyses needed in this poorly studied family at the microevolutionary level.(AU)


Los bagres neotropicales Pseudopimelodus atricaudus y Pseudopimelodus magnus son dos especies recientemente descubiertas, endémicas de la cuenca Magdalena-Cauca en Colombia. En este estudio, se desarrollaron 13 loci microsatélites usando tecnología de secuenciación de próxima generación para evaluar la diversidad genética y la estructura poblacional de P. atricaudus y evaluar su amplificación cruzada en P. magnus. Ambas especies exhibieron altos valores de diversidad genética (P. atricaudus: Na: 9.000 - 9.769 alelos/locus, HO: 0.760 - 0.804, HE: 0.804 - 0.840; P. magnus: Na: 12.8 - 5.4 alelos/locus, HO: 0.638 - 0.683, HE: 0.747 - 0.755) comparados con los valores promedios de diversidad genética reportados para Siluriformes neotropicales, y ausencia de estructura genética entre los sitios analizados (P. atricaudus: F'ST= 0.013 - 0.017, P > 0.05, D'est= -0.004 - 0.023, P > 0.05; P. magnus: F'ST= 0.031, P= 0.055; D'est= 0.045, P= 0.058). Este trabajo representa la primera aproximación a la diversidad y genética poblacional de especies de la familia Pseudopimelodidae y proporciona un marco de referencia para futuros estudios genético-poblacionales y de conservación, requeridos en esta familia de bagres poco estudiada en el nivel microevolutivo.(AU)


Subject(s)
Animals , Genetic Variation , Catfishes/genetics , Microsatellite Repeats , Genetics, Population
15.
Neotrop. ichthyol ; 19(1): e200120, 2021. tab, graf
Article in English | VETINDEX, LILACS | ID: biblio-1287437

ABSTRACT

The Neotropical catfish genus Pseudoplatystoma comprises eight species of large size, widely distributed in South American basins. The endangered species P. magdaleniatum is endemic to Magdalena basin (Colombia), experiences high fishing pressure and its population genetics is relatively unknown. To study the genetic status and structure of P. magdaleniatum, 25 species-specific polymorphic microsatellite loci were developed using next-generation sequencing and then tested in samples collected in the Magdalena-Cauca basin. Based on 15 of these loci, P. magdaleniatum showed a high number of alleles per locus (9-10), high values of observed (0.762-0.798) and expected (0.770-0.791) heterozygosities, recent reduction of population size and gene flow. These findings constitute a baseline to measure potential changes in genetic diversity and structure of this commercially important species in a basin undergoing high anthropogenic activities.(AU)


El género de bagres neotropicales Pseudoplatystoma comprende ocho especies de gran tamaño, ampliamente distribuidas en las cuencas de Suramérica. La especie en peligro de extinción P. magdaleniatum es endémica de la Cuenca del Magdalena (Colombia), experimenta una alta presión pesquera y su genética poblacional es relativamente desconocida. Para estudiar el estado y estructura genética de P. magdaleniatum, se desarrollaron 25 loci microsatélites polimórficos especie específicos utilizando secuenciación de próxima generación y se evaluaron en muestras recolectadas en la Cuenca del Magdalena-Cauca. Con base en 15 loci, P. magdaleniatum mostró un alto número de alelos por locus (9-10), valores altos de heterocigosidad observada (0.762-0.798) y esperada (0.770-0.791), reducción reciente del tamaño poblacional y flujo génico. Estos hallazgos constituyen una línea de base para medir cambios potenciales en la diversidad y estructura genética de esta especie comercialmente importante en una cuenca sometida a altas actividades antropogénicas.(AU)


Subject(s)
Animals , Genetic Variation , Weights and Measures , Catfishes , Microsatellite Repeats , Endangered Species
16.
Rev Peru Med Exp Salud Publica ; 37(3): 462-470, 2020 Dec 02.
Article in Spanish, English | MEDLINE | ID: mdl-33295548

ABSTRACT

OBJECTIVES: To evaluate the in vitro photodynamic activity of aluminum phthalocyanine tetrasulfonate chloride (AlPcClS4) on promastigotes and amastigotes of Leishmania (Viannia) peruviana and Leishmania (Viannia) braziliensis. MATERIALS AND METHODS: The activity of photodynamic therapy using AlPcClS4 on Leishmania promastigote and amastigotes was determined by the Methyl Thiazole Tetrazolium (MTT) colorimetric method and quantitative PCR, respectively. RESULTS: Photodynamic treatment showed an inhibitory effect on promastigotes, particularly on Leishmania (V.) peruviana, to a lesser extent on Leishmania (V.) braziliensis and also on intracellular forms of both species. At 24 hours post-radiation, using concentrations of 200 µM and 350 µM, the inhibitory effect on Leishmania (V.) peruviana was 72.9% and 73.9% respectively; at 96 hours the inhibitory effect was of 78.8% and 80.6%, respectively. Regarding intracellular forms, the inhibitory effect on Leishmania (V.) peruviana amastigotes was 57.8% at 72 hours post-treatment, using a concentration of 200 µM. The IC50 was 56.5, 50, 44 and 39.7 µM, at 24, 48, 72 and 96 hours post-radiation, respectively. CONCLUSIONS: Photodynamic therapy using AlPcClS4 against Leishmania species showed encouraging results, mainly on Leishmania (V.) peruviana, suggesting a potential use as an alternative or complement to the usual treatment of tegumentary leishmaniasis. However, new trials are still required to determine the selectivity index for the intracellular form of the parasite, and to develop methods to facilitate the efficient entry of the molecule into the host cell and the parasite.


OBJETIVOS: Evaluar la actividad fotodinámica in vitro de la ftalocianina de aluminio tetrasulfonada clorada (AlPcClS4) sobre promastigotes y amastigotes de Leishmania (Viannia) peruviana y Leishmania (Viannia) braziliensis. MATERIALES Y MÉTODOS: La actividad del tratamiento fotodinámico empleando AlPcClS4 sobre promastigotes y amastigotes de Leishmania fue determinada mediante el método colorimétrico Metil Tiazol Tetrazolium (MTT) y PCR cuantitativo, respectivamente. RESULTADOS: El tratamiento fotodinámico presentó un efecto inhibitorio sobre promastigotes, principalmente sobre Leishmania (V.) peruviana, en menor proporción sobre Leishmania (V.) braziliensis y sobre las formas intracelulares de ambas especies. En Leishmania (V.) peruviana, a las 24 horas posirradiación a 200 µM y 350 µM el efecto inhibitorio fue del 72,9% y 73,9%, respectivamente y a las 96 horas fue del 78,8% y 80,6%, respectivamente. En las formas intracelulares, empleando 200 µM y evaluado a las 72 horas postratamiento, se observó una inhibición del 57,8% de amastigotes de Leishmania (V.) peruviana. El IC50 fue del 56,5; 50; 44; y 39,7 µM, que corresponde a las 24, 48, 72 y 96 horas posirradiación, respectivamente. CONCLUSIONES: El tratamiento fotodinámico empleando AlPcClS4 frente a las especies de Leishmania presentó resultados alentadores principalmente sobre Leishmania (V.) peruviana, lo cual sugiere su potencial uso como alternativa o complemento del tratamiento convencional de la leishmaniasis tegumentaria. Sin embargo, aún se requiere continuar con nuevos ensayos para determinar el índice de selectividad sobre el parásito en su forma intracelular, y desarrollar estrategias que faciliten el ingreso eficiente de la molécula hacia la célula hospedera y al parásito.


Subject(s)
Chlorides , Indoles , Leishmania , Organometallic Compounds , Chlorides/pharmacology , Indoles/pharmacology , Leishmania/classification , Leishmania/drug effects , Leishmania braziliensis/drug effects , Organometallic Compounds/pharmacology
17.
J Stroke Cerebrovasc Dis ; 29(11): 105242, 2020 Nov.
Article in English | MEDLINE | ID: mdl-33066927

ABSTRACT

BACKGROUND: There is geographic variability in the clinical profile and outcomes of non-traumatic intracerebral hematoma (ICH) in the young, and data for the Philippines is lacking. We aimed to describe this in a cohort from the Philippines, and identify predictors of mortality. METHODS: We performed a retrospective study of all patients aged 19-49 years with radiographic evidence of non-traumatic ICH admitted in our institution over five years. Data on demographics, risk factors, imaging, etiologies, surgical management, in-hospital mortality, and discharge functional outcomes were collected. Multivariate logistic regression analysis was done to determine factors predictive of mortality. RESULTS: A total of 185 patients were included, which had a mean age of 40.98 years and a male predilection (71.9%). The most common hematoma location was subcortical, but it was lobar for the subgroup of patients aged 19-29 years. Overall, the most common etiology was hypertension (73.0%), especially in patients aged 40-49. Conversely, the incidence of vascular lesions and thrombocytopenia was higher in patients aged 19-29. Surgery was done in 7.0% of patients. The rates of mortality and favorable functional outcome at discharge were 8.7% and 35.1%, respectively. Younger age (p = 0.004), higher NIHSS score on admission (p=0.01), higher capillary blood glucose on admission (p=0.02), and intraventricular extension of hematoma (p = 0.01) predicted mortality. CONCLUSIONS: In the Philippines, the most common etiology of ICH in young patients was hypertension, while aneurysms and AVM's were the most common etiology in the subgroup aged 19 - 29 years. Independent predictors of mortality were identified.


Subject(s)
Cerebral Hemorrhage/epidemiology , Hematoma/epidemiology , Hypertension/epidemiology , Intracranial Aneurysm/epidemiology , Intracranial Arteriovenous Malformations/epidemiology , Adult , Age Distribution , Cerebral Hemorrhage/diagnostic imaging , Cerebral Hemorrhage/mortality , Cerebral Hemorrhage/surgery , Female , Hematoma/diagnostic imaging , Hematoma/mortality , Hematoma/surgery , Humans , Hypertension/diagnosis , Hypertension/mortality , Incidence , Intracranial Aneurysm/diagnostic imaging , Intracranial Aneurysm/mortality , Intracranial Aneurysm/surgery , Intracranial Arteriovenous Malformations/diagnostic imaging , Intracranial Arteriovenous Malformations/mortality , Intracranial Arteriovenous Malformations/surgery , Male , Middle Aged , Philippines/epidemiology , Prognosis , Retrospective Studies , Risk Factors , Tertiary Care Centers , Young Adult
18.
PeerJ ; 8: e9723, 2020.
Article in English | MEDLINE | ID: mdl-32953260

ABSTRACT

The family Pseudopimelodidae is widely distributed in South America and includes 51 described species organized in seven genera. Only two of four species of the genus Pseudopimelodus have been recorded for the trans-Andean basins of Colombia, Pseudopimelodus bufonius and P. schultzi, whose similarity in external morphology make their identification difficult. We performed a phylogenetic analysis using a fragment of the Cytochrome C Oxidase subunit 1 gene (COI), and analyzed osteological and traditional morphometric characters to study Pseudopimelodus from the Colombian trans-Andean region. Results provided strong support for two clades phylogenetically related to Pseudopimelodus, that showed clear-cut molecular, osteological, and morphometric differences from previously described bumblebee catfishes. Based on these results, we describe two Pseudopimelodus species from the Magdalena-Cauca River Basin: P. magnus sp. nov. with 43-44 vertebrae, dorsal-fin spine with serrations on its anterior margin; lateral margin of transverse process of the fourth vertebra of the Weberian complex forming an acute angle in ventral view and P. atricaudus sp. nov. with 39 vertebrae, dorsal-fin spine smooth on its anterior margin and a dark, vertical band covering 3/4 of the caudal fin with base of rays and tip of caudal-fin lobes hyaline.

19.
Rev. peru. med. exp. salud publica ; 37(3): 462-470, jul-sep 2020. tab, graf
Article in Spanish | LILACS | ID: biblio-1145017

ABSTRACT

RESUMEN Objetivos: Evaluar la actividad fotodinámica in vitro de la ftalocianina de aluminio tetrasulfonada clorada (AlPcClS4) sobre promastigotes y amastigotes de Leishmania (Viannia) peruviana y Leishmania (Viannia) braziliensis. Materiales y métodos: La actividad del tratamiento fotodinámico empleando AlPcClS4 sobre promastigotes y amastigotes de Leishmania fue determinada mediante el método colorimétrico Metil Tiazol Tetrazolium (MTT) y PCR cuantitativo, respectivamente. Resultados: El tratamiento fotodinámico presentó un efecto inhibitorio sobre promastigotes, principalmente sobre Leishmania (V.) peruviana, en menor proporción sobre Leishmania (V.) braziliensis y sobre las formas intracelulares de ambas especies. En Leishmania (V.) peruviana, a las 24 horas posirradiación a 200 µM y 350 µM el efecto inhibitorio fue del 72,9% y 73,9%, respectivamente y a las 96 horas fue del 78,8% y 80,6%, respectivamente. En las formas intracelulares, empleando 200 µM y evaluado a las 72 horas postratamiento, se observó una inhibición del 57,8% de amastigotes de Leishmania (V.) peruviana. El IC50 fue del 56,5; 50; 44; y 39,7 µM, que corresponde a las 24, 48, 72 y 96 horas posirradiación, respectivamente. Conclusiones: El tratamiento fotodinámico empleando AlPcClS4 frente a las especies de Leishmania presentó resultados alentadores principalmente sobre Leishmania (V.) peruviana, lo cual sugiere su potencial uso como alternativa o complemento del tratamiento convencional de la leishmaniasis tegumentaria. Sin embargo, aún se requiere continuar con nuevos ensayos para determinar el índice de selectividad sobre el parásito en su forma intracelular, y desarrollar estrategias que faciliten el ingreso eficiente de la molécula hacia la célula hospedera y al parásito.


ABSTRACT Objectives: To evaluate the in vitro photodynamic activity of aluminum phthalocyanine tetrasulfonate chloride (AlPcClS4) on promastigotes and amastigotes of Leishmania (Viannia) peruviana and Leishmania (Viannia) braziliensis. Materials and methods: The activity of photodynamic therapy using AlPcClS4 on Leishmania promastigote and amastigotes was determined by the Methyl Thiazole Tetrazolium (MTT) colorimetric method and quantitative PCR, respectively. Results: Photodynamic treatment showed an inhibitory effect on promastigotes, particularly on Leishmania (V.) peruviana, to a lesser extent on Leishmania (V.) braziliensis and also on intracellular forms of both species. At 24 hours post-radiation, using concentrations of 200 μM and 350 μM, the inhibitory effect on Leishmania (V.) peruviana was 72.9% and 73.9% respectively; at 96 hours the inhibitory effect was of 78.8% and 80.6%, respectively. Regarding intracellular forms, the inhibitory effect on Leishmania (V.) peruviana amastigotes was 57.8% at 72 hours post-treatment, using a concentration of 200 μM. The IC50 was 56.5, 50, 44 and 39.7 μM, at 24, 48, 72 and 96 hours post-radiation, respectively. Conclusions: Photodynamic therapy using AlPcClS4 against Leishmania species showed encouraging results, mainly on Leishmania (V.) peruviana, suggesting a potential use as an alternative or complement to the usual treatment of tegumentary leishmaniasis. However, new trials are still required to determine the selectivity index for the intracellular form of the parasite, and to develop methods to facilitate the efficient entry of the molecule into the host cell and the parasite.


Subject(s)
Leishmania braziliensis , In Vitro Techniques , Leishmaniasis , Aluminum , Photochemotherapy , Tropical Medicine , Leishmaniasis, Cutaneous , Photosensitizing Agents
20.
PeerJ ; 8: e9028, 2020.
Article in English | MEDLINE | ID: mdl-32537262

ABSTRACT

Pseudopimelodus is a Neotropical genus of bumblebee catfish, composed of four valid species occurring in both trans- and cis-Andean rivers of South America. The orogeny of the Andes has led to diversification in the genus Pseudopimelodus in Colombia. This study analyzed partial sequences of mitochondrial cox1 and nuclear rag2 genes to test the hypothesis that the species, nominally recognized as P. schultzi and P. bufonius in Colombia, correspond to more than two different evolutionary lineages. Results indicate high levels of genetic divergence among individuals of nominal P. schultzi and P. bufonius, from trans- and cis-Andean basins in Colombia. In addition, five divergent lineages of Pseudopimelodus were confidently delimited by using a single-locus species-discovery approach and confirmed by species tree analyses. Additionally, molecular-clock dating showed that most diversification processes in Pseudopimelodus took place during the Miocene, when Andean tectonic evolution was occurring in northwestern South America. The present study provides, for the first time, phylogeographic insight into this Neotropical genus.

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