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1.
Sensors (Basel) ; 24(6)2024 Mar 21.
Article in English | MEDLINE | ID: mdl-38544278

ABSTRACT

Hyperspectral image classification remains challenging despite its potential due to the high dimensionality of the data and its limited spatial resolution. To address the limited data samples and less spatial resolution issues, this research paper presents a two-scale module-based CTNet (convolutional transformer network) for the enhancement of spatial and spectral features. In the first module, a virtual RGB image is created from the HSI dataset to improve the spatial features using a pre-trained ResNeXt model trained on natural images, whereas in the second module, PCA (principal component analysis) is applied to reduce the dimensions of the HSI data. After that, spectral features are improved using an EAVT (enhanced attention-based vision transformer). The EAVT contained a multiscale enhanced attention mechanism to capture the long-range correlation of the spectral features. Furthermore, a joint module with the fusion of spatial and spectral features is designed to generate an enhanced feature vector. Through comprehensive experiments, we demonstrate the performance and superiority of the proposed approach over state-of-the-art methods. We obtained AA (average accuracy) values of 97.87%, 97.46%, 98.25%, and 84.46% on the PU, PUC, SV, and Houston13 datasets, respectively.

2.
Sci Rep ; 12(1): 7810, 2022 05 12.
Article in English | MEDLINE | ID: mdl-35552469

ABSTRACT

Zika fever is an infectious disease caused by the Zika virus (ZIKV). The disease is claiming millions of lives worldwide, primarily in developing countries. In addition to vector control strategies, the most effective way to prevent the spread of ZIKV infection is vaccination. There is no clinically approved vaccine to combat ZIKV infection and curb its pandemic. An epitope-based peptide vaccine (EBPV) is seen as a powerful alternative to conventional vaccinations because of its low production cost and short production time. Nonetheless, EBPVs have gotten less attention, despite the fact that they have a significant untapped potential for enhancing vaccine safety, immunogenicity, and cross-reactivity. Such a vaccine technology is based on target pathogen's selected antigenic peptides called T-cell epitopes (TCE), which are synthesized chemically based on their amino acid sequences. The identification of TCEs using wet-lab experimental approach is challenging, expensive, and time-consuming. Therefore in this study, we present computational model for the prediction of ZIKV TCEs. The model proposed is an ensemble of decision trees that utilizes the physicochemical properties of amino acids. In this way a large amount of time and efforts would be saved for quick vaccine development. The peptide sequences dataset for model training was retrieved from Virus Pathogen Database and Analysis Resource (ViPR) database. The sequences dataset consist of experimentally verified T-cell epitopes (TCEs) and non-TCEs. The model demonstrated promising results when evaluated on test dataset. The evaluation metrics namely, accuracy, AUC, sensitivity, specificity, Gini and Mathew's correlation coefficient (MCC) recorded values of 0.9789, 0.984, 0.981, 0.987, 0.974 and 0.948 respectively. The consistency and reliability of the model was assessed by carrying out the five (05)-fold cross-validation technique, and the mean accuracy of 0.97864 was reported. Finally, model was compared with standard machine learning (ML) algorithms and the proposed model outperformed all of them. The proposed model will aid in predicting novel and immunodominant TCEs of ZIKV. The predicted TCEs may have a high possibility of acting as prospective vaccine targets subjected to in-vivo and in-vitro scientific assessments, thereby saving lives worldwide, preventing future epidemic-scale outbreaks, and lowering the possibility of mutation escape.


Subject(s)
Zika Virus Infection , Zika Virus , Decision Trees , Epitopes, T-Lymphocyte , Humans , Machine Learning , Peptides , Reproducibility of Results , Vaccines, Subunit , Zika Virus/genetics
3.
J Healthc Eng ; 2022: 7713939, 2022.
Article in English | MEDLINE | ID: mdl-35432824

ABSTRACT

COVID-19 is the repugnant but the most searched word since its outbreak in November 2019 across the globe. The world has to battle with it until an effective solution is developed. Due to the advancement in mobile and sensor technology, it is possible to come up with Internet of things-based healthcare systems. These novel healthcare systems can be proactive and preventive rather than traditional reactive healthcare systems. This article proposes a real-time IoT-enabled framework for the detection and prediction of COVID-19 suspects in early stages, by collecting symptomatic data and analyzing the nature of the virus in a better manner. The framework computes the presence of COVID-19 virus by mining the health parameters collected in real time from sensors and other IoT devices. The framework is comprised of four main components: user system or data collection center, data analytic center, diagnostic system, and cloud system. To point out and detect the COVID-19 suspected in real time, this work proposes the five machine learning techniques, namely support vector machine (SVM), decision tree, naïve Bayes, logistic regression, and neural network. In our proposed framework, the real and primary dataset collected from SKIMS, Srinagar, is used to validate our work. The experiment on the primary dataset was conducted using different machine learning techniques on selected symptoms. The efficiency of algorithms is calculated by computing the results of performance metrics such as accuracy, precision, recall, F1 score, root-mean-square error, and area under the curve score. The employed machine learning techniques have shown the accuracy of above 95% on the primary symptomatic data. Based on the experiment conducted, the proposed framework would be effective in the early identification and prediction of COVID-19 suspect realizing the nature of the disease in better way.


Subject(s)
COVID-19 , Algorithms , Bayes Theorem , COVID-19/diagnosis , Humans , Machine Learning , Support Vector Machine
4.
Pathogens ; 11(2)2022 Jan 24.
Article in English | MEDLINE | ID: mdl-35215090

ABSTRACT

The only part of an antigen (a protein molecule found on the surface of a pathogen) that is composed of epitopes specific to T and B cells is recognized by the human immune system (HIS). Identification of epitopes is considered critical for designing an epitope-based peptide vaccine (EBPV). Although there are a number of vaccine types, EBPVs have received less attention thus far. It is important to mention that EBPVs have a great deal of untapped potential for boosting vaccination safety-they are less expensive and take a short time to produce. Thus, in order to quickly contain global pandemics such as the ongoing outbreak of coronavirus disease 2019 (COVID-19) caused by the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), as well as epidemics and endemics, EBPVs are considered promising vaccine types. The high mutation rate of SARS-CoV-2 has posed a great challenge to public health worldwide because either the composition of existing vaccines has to be changed or a new vaccine has to be developed to protect against its different variants. In such scenarios, time being the critical factor, EBPVs can be a promising alternative. To design an effective and viable EBPV against different strains of a pathogen, it is important to identify the putative T- and B-cell epitopes. Using the wet-lab experimental approach to identify these epitopes is time-consuming and costly because the experimental screening of a vast number of potential epitope candidates is required. Fortunately, various available machine learning (ML)-based prediction methods have reduced the burden related to the epitope mapping process by decreasing the potential epitope candidate list for experimental trials. Moreover, these methods are also cost-effective, scalable, and fast. This paper presents a systematic review of various state-of-the-art and relevant ML-based methods and tools for predicting T- and B-cell epitopes. Special emphasis is placed on highlighting and analyzing various models for predicting epitopes of SARS-CoV-2, the causative agent of COVID-19. Based on the various methods and tools discussed, future research directions for epitope prediction are presented.

5.
Comput Intell Neurosci ; 2022: 4454226, 2022.
Article in English | MEDLINE | ID: mdl-35126492

ABSTRACT

The digestive system is one of the essential systems in human physiology where the stomach has a significant part to play with its accessories like the esophagus, duodenum, small intestines, and large intestinal tract. Many individuals across the globe suffer from gastric dysrhythmia in combination with dyspepsia (improper digestion), unexplained nausea (feeling), vomiting, abdominal discomfort, ulcer of the stomach, and gastroesophageal reflux illnesses. Some of the techniques used to identify anomalies include clinical analysis, endoscopy, electrogastrogram, and imaging. Electrogastrogram is the registration of electrical impulses that pass through the stomach muscles and regulate the contraction of the muscle. The electrode senses the electrical impulses from the stomach muscles, and the electrogastrogram is recorded. A computer analyzes the captured electrogastrogram (EGG) signals. The usual electric rhythm produces an enhanced current in the typical stomach muscle after a meal. Postmeal electrical rhythm is abnormal in those with stomach muscles or nerve anomalies. This study considers EGG of ordinary individuals, bradycardia, dyspepsia, nausea, tachycardia, ulcer, and vomiting for analysis. Data are collected in collaboration with the doctor for preprandial and postprandial conditions for people with diseases and everyday individuals. In CWT with a genetic algorithm, db4 is utilized to obtain an EGG signal wave pattern in a 3D plot using MATLAB. The figure shows that the existence of the peak reflects the EGG signal cycle. The number of present peaks categorizes EGG. Adaptive Resonance Classifier Network (ARCN) is utilized to identify EGG signals as normal or abnormal subjects, depending on the parameter of alertness (µ). This study may be used as a medical tool to diagnose digestive system problems before proposing invasive treatments. Accuracy of the proposed work comes up with 95.45%, and sensitivity and specificity range is added as 92.45% and 87.12%.


Subject(s)
Biosensing Techniques , Dyspepsia , Algorithms , Humans , Machine Learning , Stomach
6.
Comput Intell Neurosci ; 2022: 4886586, 2022.
Article in English | MEDLINE | ID: mdl-35047035

ABSTRACT

Telemetric information is great in size, requiring extra room and transmission time. There is a significant obstruction of storing or sending telemetric information. Lossless data compression (LDC) algorithms have evolved to process telemetric data effectively and efficiently with a high compression ratio and a short processing time. Telemetric information can be packed to control the extra room and association data transmission. In spite of the fact that different examinations on the pressure of telemetric information have been conducted, the idea of telemetric information makes pressure incredibly troublesome. The purpose of this study is to offer a subsampled and balanced recurrent neural lossless data compression (SB-RNLDC) approach for increasing the compression rate while decreasing the compression time. This is accomplished through the development of two models: one for subsampled averaged telemetry data preprocessing and another for BRN-LDC. Subsampling and averaging are conducted at the preprocessing stage using an adjustable sampling factor. A balanced compression interval (BCI) is used to encode the data depending on the probability measurement during the LDC stage. The aim of this research work is to compare differential compression techniques directly. The final output demonstrates that the balancing-based LDC can reduce compression time and finally improve dependability. The final experimental results show that the model proposed can enhance the computing capabilities in data compression compared to the existing methodologies.


Subject(s)
Data Compression , Deep Learning , Algorithms , Neural Networks, Computer , Telemetry
7.
J Healthc Eng ; 2022: 6462657, 2022.
Article in English | MEDLINE | ID: mdl-35047155

ABSTRACT

BACKGROUND: Even in today's environment, when there is a plethora of information accessible, it may be difficult to make appropriate choices for one's well-being. Data mining, machine learning, and computational statistics are among the most popular arenas of training today, and they are all aimed at secondary empowered person in making good decisions that will maximize the outcome of whatever working area they are involved with. Because the degree of rise in the number of patient roles is directly related to the rate of people growth and lifestyle variations, the healthcare sector has a significant need for data processing services. When it comes to cancer, the prognosis is an expression that relates to the possibility of the patient surviving in general, but it may also be used to describe the severity of the sickness as it will present itself in the patient's future timeline. Methodology. The proposed technique consists of three stages: input data acquisition, preprocessing, and classification. Data acquisition consists of input raw data which is followed by preprocessing to eliminate the missed data and the classification is carried out using ensemble classifier to analyze the stages of cancer. This study explored the combined influence of the prominent labels in conjunction with one another utilizing the multilabel classifier approach, which is successful. Finally, an ensemble classifier model has been constructed and experimentally validated to increase the accuracy of the classifier model, which has been previously shown. The entire performance of the recommended and tested models demonstrates a steady development of 2% to 6% over the baseline presentation on the baseline performance. RESULTS: Providing a good contribution to the general health welfare of noncommercial potential workers in the healthcare sector is an opportunity provided by this recommended job outcome. It is anticipated that alternative solutions to these constraints, as well as automation of the whole process flow of all five phases, will be the key focus of the work to be carried out shortly. Predicting health status of employee in industry or information trends is made easier by these data patterns. The proposed classifier achieves the accuracy rate of 93.265%.


Subject(s)
Algorithms , Data Mining , Delivery of Health Care , Humans , Intelligence , Machine Learning
8.
J Healthc Eng ; 2022: 2793850, 2022.
Article in English | MEDLINE | ID: mdl-35070231

ABSTRACT

The Zika virus presents an extraordinary public health hazard after spreading from Brazil to the Americas. In the absence of credible forecasts of the outbreak's geographic scope and infection frequency, international public health agencies were unable to plan and allocate surveillance resources efficiently. An RNA test will be done on the subjects if they are found to be infected with Zika virus. By training the specified characteristics, the suggested Hybrid Optimization Algorithm such as multilayer perceptron with probabilistic optimization strategy gives forth a greater accuracy rate. The MATLAB program incorporates numerous machine learning algorithms and artificial intelligence methodologies. It reduces forecast time while retaining excellent accuracy. The projected classes are encrypted and sent to patients. The Advanced Encryption Standard (AES) and TRIPLE Data Encryption Standard (TEDS) are combined to make this possible (DES). The experimental outcomes improve the accuracy of patient results communication. Cryptosystem processing acquires minimal timing of 0.15 s with 91.25 percent accuracy.


Subject(s)
Zika Virus Infection , Zika Virus , Algorithms , Artificial Intelligence , Delivery of Health Care , Humans , Technology , Zika Virus Infection/diagnosis , Zika Virus Infection/epidemiology
9.
Comput Math Methods Med ; 2021: 7727685, 2021.
Article in English | MEDLINE | ID: mdl-34917167

ABSTRACT

Internet of Medical Things (IoMT) has emerged as an integral part of the smart health monitoring system in the present world. The smart health monitoring deals with not only for emergency and hospital services but also for maintaining a healthy lifestyle. The industry 5.0 and 5/6G has allowed the development of cost-efficient sensors and devices which can collect a wide range of human biological data and transfer it through wireless network communication in real time. This led to real-time monitoring of patient data through multiple IoMT devices from remote locations. The IoMT network registers a large number of patients and devices every day, along with the generation of huge amount of big data or health data. This patient data should retain data privacy and data security on the IoMT network to avoid any misuse. To attain such data security and privacy of the patient and IoMT devices, a three-level/tier network integrated with blockchain and interplanetary file system (IPFS) has been proposed. The proposed network is making the best use of IPFS and blockchain technology for security and data exchange in a three-level healthcare network. The present framework has been evaluated for various network activities for validating the scalability of the network. The network was found to be efficient in handling complex data with the capability of scalability.


Subject(s)
Blockchain , Computer Security , Internet of Things , Cloud Computing , Computational Biology , Computer Systems , Confidentiality , Data Collection , Humans , Remote Sensing Technology , Telemedicine
10.
Behav Neurol ; 2021: 4028761, 2021.
Article in English | MEDLINE | ID: mdl-34900023

ABSTRACT

Patient behavioral analysis is the key factor for providing treatment to patients who may suffer from various difficulties including neurological disease, head trauma, and mental disease. Analyzing the patient's behavior helps in determining the root cause of the disease. In traditional healthcare, patient behavioral analysis has lots of challenges that were much more difficult. The patient behavior can be easily analyzed with the development of smart healthcare. Information technology plays a key role in understanding the concept of smart healthcare. A new generation of information technologies including IoT and cloud computing is used for changing the traditional healthcare system in all ways. Using Internet of Things in the healthcare institution enhances the effectiveness as well as makes it more personalized and convenient to the patients. The first thing that will be discussed in the article is the technologies that have been used to support the smart class, and further, there will be a discussion on the existing problems with the smart healthcare system and how these problems can be solved. This study can provide essential information about the role of smart healthcare and IoT in maintaining behavior of patent. Various biomarkers are maintained properly with the help of these technologies. This study can provide effective information about importance of smart health system. This smart healthcare is conducted with the involvement of proper architecture. This is treated as effective energy efficiency architecture. Artificial intelligence is used increasingly in healthcare to maintain diagnosis and other important factors of healthcare. This application is also used to maintain patient engagement, which is also included in this study. Major hardware components are also included in this technology such as CO sensor and CO2 sensor.


Subject(s)
Internet of Things , Artificial Intelligence , Delivery of Health Care , Humans
11.
Diagnostics (Basel) ; 11(11)2021 10 26.
Article in English | MEDLINE | ID: mdl-34829338

ABSTRACT

An ongoing outbreak of coronavirus disease 2019 (COVID-19), caused by a single-stranded RNA virus called severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has caused a worldwide pandemic that continues to date. Vaccination has proven to be the most effective technique, by far, for the treatment of COVID-19 and to combat the outbreak. Among all vaccine types, epitope-based peptide vaccines have received less attention and hold a large untapped potential for boosting vaccine safety and immunogenicity. Peptides used in such vaccine technology are chemically synthesized based on the amino acid sequences of antigenic proteins (T-cell epitopes) of the target pathogen. Using wet-lab experiments to identify antigenic proteins is very difficult, expensive, and time-consuming. We hereby propose an ensemble machine learning (ML) model for the prediction of T-cell epitopes (also known as immune relevant determinants or antigenic determinants) against SARS-CoV-2, utilizing physicochemical properties of amino acids. To train the model, we retrieved the experimentally determined SARS-CoV-2 T-cell epitopes from Immune Epitope Database and Analysis Resource (IEDB) repository. The model so developed achieved accuracy, AUC (Area under the ROC curve), Gini, specificity, sensitivity, F-score, and precision of 98.20%, 0.991, 0.994, 0.971, 0.982, 0.990, and 0.981, respectively, using a test set consisting of SARS-CoV-2 peptides (T-cell epitopes and non-epitopes) obtained from IEDB. The average accuracy of 97.98% was recorded in repeated 5-fold cross validation. Its comparison with 05 robust machine learning classifiers and existing T-cell epitope prediction techniques, such as NetMHC and CTLpred, suggest the proposed work as a better model. The predicted epitopes from the current model could possess a high probability to act as potential peptide vaccine candidates subjected to in vitro and in vivo scientific assessments. The model developed would help scientific community working in vaccine development save time to screen the active T-cell epitope candidates of SARS-CoV-2 against the inactive ones.

12.
J Healthc Eng ; 2021: 2116647, 2021.
Article in English | MEDLINE | ID: mdl-34697564

ABSTRACT

In patients with chronic diseases condition, mobile health monitoring facility proves to play a significant role in providing significant assistance toward personal management. This research examined the use of smartphones by diabetes patients and their intentions to apply them for self-care and monitoring as well as management. This cross-sectional survey-based study was conducted in Jul-Aug 2021 with 200 diabetic patients (especially type 2) who were visiting specialized clinics and hospitals of Gujrat state, India. A validated questionnaire survey was designed to collect data, which included questions about demographics, information pertaining to other, use of cellphones, the Internet, and the intention to implement smartphones for diabetes monitoring, self-care, and self-management. A highest number of studied participants have mobile phone (97.5%) and smartphones (87%) and access the Internet on daily basis (83.5%). Younger participants were more inclined to use smartphone apps and have also shown more interest for continuous use in the future (p < 0.01). The majority of participants used apps for nutritional planning (85.5%), to monitor glucose control (76.5%), and for scheduling of diabetes appointments on the calendar (90.5%). Recommendations to use mobile app by doctors or healthcare profession were reported by 20.5% of the participants and attitude and future intention to use mobile apps were reported by the majority of participants. The majority of type 2 diabetes patients choose to use their cellphones and the internet or mobile phone reminder system for medication as well as to plan their diets, monitor their blood sugar levels, and communicate with their doctors. The findings of this research can be used to develop strategies and implement mHealth-based therapies to assist patients with type 2 diabetes to efficiently manage their health and might contribute to reducing patients' out-of-pocket expenditure as well as reducing disability-adjusted life years (DAILY) attributed by DM.


Subject(s)
Diabetes Mellitus, Type 2 , Internet of Things , Mobile Applications , Self-Management , Telemedicine , Cross-Sectional Studies , Diabetes Mellitus, Type 2/therapy , Humans , Internet , Smartphone
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