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1.
Biotechnol Biofuels Bioprod ; 17(1): 62, 2024 May 07.
Article in English | MEDLINE | ID: mdl-38715100

ABSTRACT

BACKGROUND: The use of ionic liquids (ILs) to fractionate lignocelluloses for various bio-based chemicals productions is in the ascendant. On this basis, the protic ILs consisting of triethylammonium hydrogen sulfate ([TEA][HSO4]) possessed great promise due to the low price, low pollution, and high efficiency. In this study, the microwave-assistant [TEA][HSO4] fractionation process was established for corn stover fractionation, so as to facilitate the monomeric sugars production and supported the downstream acetone-butanol-ethanol (ABE) fermentation. RESULTS: The assistance of microwave irradiation could obviously shorten the fractionation period of corn stover. Under the optimized condition (190 W for 3 min), high xylan removal (93.17 ± 0.63%) and delignification rate (72.90 ± 0.81%) were realized. The mechanisms for the promotion effect of the microwave to the protic ILs fractionation process were ascribed to the synergistic effect of the IL and microwaves to the depolymerization of lignocellulose through the ionic conduction, which can be clarified by the characterization of the pulps and the isolated lignin specimens. Downstream valorization of the fractionated pulps into ABE productions was also investigated. The [TEA][HSO4] free corn stover hydrolysate was capable of producing 12.58 g L-1 of ABE from overall 38.20 g L-1 of monomeric sugars without detoxification and additional nutrients supplementation. CONCLUSIONS: The assistance of microwave irradiation could significantly promote the corn stover fractionation by [TEA][HSO4]. Mass balance indicated that 8.1 g of ABE and 16.61 g of technical lignin can be generated from 100 g of raw corn stover based on the novel fractionation strategy.

2.
Int J Biol Macromol ; 267(Pt 1): 131387, 2024 May.
Article in English | MEDLINE | ID: mdl-38582470

ABSTRACT

A novel Lentinus edodes mycelia polysaccharide (LMP) prepared in our laboratory has been identified to be effective in inhibiting the damage of islet ß cells induced by glucose toxicity. However, whether it can effectively alleviate the pyroptosis of human umbilical vein endothelial cells (HUVECs) induced by advanced glycation end products (AGEs) remains unclear. Bioinformatics and cell biology techniques were used to explore the mechanism of LMP inhibiting AGEs-induced HUVECs damage. The results indicated that AGEs significantly increased the expression of LncRNA MALAT1, decreased cell viability to 79.67 %, increased intracellular ROS level to 248.19 % compared with the control group, which further led to cell membrane rupture. The release of LDH in cellular supernatant was increased to 149.42 %, and the rate of propidium iodide staining positive cells increased to 277.19 %, indicating the cell pyroptosis occurred. However, the above trend was effectively retrieved after the treatment with LMP. LMP effectively decreased the expression of LncRNA MALAT1 and mTOR, promoted the expression of miR-199b, inhibited AGEs-induced HUVECs pyroptosis by regulating the NLRP3/Caspase-1/GSDMD pathway. LncRNA MALAT1 might be a new target for LMP to inhibit AGEs-induced HUVECs pyroptosis. This study manifested the role of LMP in improving diabetes angiopathy and broadens the application of polysaccharide.


Subject(s)
Caspase 1 , Gasdermins , Glycation End Products, Advanced , Human Umbilical Vein Endothelial Cells , MicroRNAs , Mycelium , NLR Family, Pyrin Domain-Containing 3 Protein , Pyroptosis , RNA, Long Noncoding , Shiitake Mushrooms , Signal Transduction , TOR Serine-Threonine Kinases , Humans , RNA, Long Noncoding/genetics , RNA, Long Noncoding/metabolism , Pyroptosis/drug effects , NLR Family, Pyrin Domain-Containing 3 Protein/metabolism , Human Umbilical Vein Endothelial Cells/drug effects , Human Umbilical Vein Endothelial Cells/metabolism , TOR Serine-Threonine Kinases/metabolism , MicroRNAs/genetics , MicroRNAs/metabolism , Caspase 1/metabolism , Shiitake Mushrooms/chemistry , Glycation End Products, Advanced/metabolism , Signal Transduction/drug effects , Mycelium/chemistry , Phosphate-Binding Proteins/metabolism , Phosphate-Binding Proteins/genetics , Intracellular Signaling Peptides and Proteins/metabolism , Intracellular Signaling Peptides and Proteins/genetics , Fungal Polysaccharides/pharmacology , Fungal Polysaccharides/chemistry , Cell Survival/drug effects , Polysaccharides/pharmacology , Polysaccharides/chemistry
3.
Oral Dis ; 2023 Mar 25.
Article in English | MEDLINE | ID: mdl-36964959

ABSTRACT

OBJECTIVE: A hypercoagulable state exists in patients with oral squamous cell carcinoma (OSCC), but the role of platelets in the tumour microenvironment has not been explored. This study revealed the status of intratumoral plateletmicrothrombi (PLT-MT) and their clinicopathological relevance and predictive value in OSCC. STUDY DESIGN: This study retrospectively evaluated 106 OSCC patients. Tumour and tumour-adjacent tissue specimens were used to stain PLT-MT. Clinicopathological information, patient follow-ups and outcomes and preoperative coagulation and inflammatory hematologic indicators were collected, and their correlation with PLT-MT was analysed. RESULTS: Intratumoral PLT-MT was present in 35 of 106 patients with OSCC who had higher preoperative D-dimer, CRP, FIB and PT levels and lower TT levels. PLT-MT was an independent correlative factor of lymph node metastasis and suggested worse OS in N0 patients. CONCLUSIONS: Intratumoral PLT-MT was found in OSCC and was correlated with a hypercoagulable inflammatory state. PLT-MT was an independent marker of lymph node metastasis and showed potential in prognosis prediction.

4.
Front Oncol ; 12: 971546, 2022.
Article in English | MEDLINE | ID: mdl-36338765

ABSTRACT

Multiple primary cancers (MPCs) refer to cancers that occur simultaneously or metachronously in the same individual. The incidence of MPC has increased recently, as the survival time of malignant tumor patients has been greatly prolonged. It is difficult to differentiate MPC from primary cancers (PCs) in the same anatomical region from the clinical manifestation alone. However, their biological behaviors appear to be distinct. In this study, we show that the prognosis of multiple primary oral cancers (MP-OCs) is worse than primary oral cancers (P-OCs). To better understand the molecular mechanisms of MP-OC, we used whole exome sequencing (WES) to analyze samples from 9 patients with MP-OC and 21 patients with P-OC. We found more somatic mutations in MP-OC than in P-OC. MP-OC had more complicated mutation signatures, which were associated with age-related and Apolipoprotein B mRNA Editing Catalytic Polypeptide-like (APOBEC) activity-related signatures. Tumor mutational burden (TMB) and mutant-allele tumor heterogeneity (MATH) of MP-OC trended higher compared to P-OC. KEGG and GO analysis showed the differential pathways of MP-OC versus P-OC. In addition, MP-OC took amplification, not loss, as the main pattern of copy number variation (CNV), while P-OC took both. Lastly, we did not find significantly different mutant germline genes, but MSH-6 mutation may be a potential MP-OC driver. In short, our preliminary results show that MP-OC and P-OC have different molecular characteristics.

5.
Environ Toxicol ; 37(9): 2269-2280, 2022 Sep.
Article in English | MEDLINE | ID: mdl-35621379

ABSTRACT

Glyoxal, a reactive carbonyl species, can be generated both endogenously (glucose metabolism) and exogenously (cigarette smoke and food system). Increasing evidence demonstrates that glyoxal exacerbates the development and progression of diabetic nephropathy, but the underlying mechanisms of glyoxal toxicity to human embryonic kidney (HEK293) cells remain unclear. In this work, the molecular mechanisms of glyoxal-induced cytotoxicity in HEK293 cells were explored with network toxicology and cell biology experiments. Network toxicology results showed that oxidative stress and advanced glycation end products (AGEs)/RAGE signaling pathways played a crucial role in glyoxal toxicity. Next, further validation was performed at the cellular level. Glyoxal activated the AGEs-RAGE signaling pathway, caused the increase of cellular ROS, and activated the p38MAPK and JNK signaling pathways, causing cellular oxidative stress. Furthermore, glyoxal caused the activation of the NF-κB signaling pathway and increased the expression of TGF-ß1, indicating that glyoxal caused cellular inflammation. Moreover, glyoxal caused cellular DNA damage accompanied by the activation of DNA damage response pathways. Finally, the mitochondrial apoptosis pathway was activated. The results that obtained in cell biology were consistent with network toxicology, which corroborated each other and together indicated that glyoxal induced HEK293 cells damage via the process of oxidative stress, the AGEs-RAGE pathway, and their associated signaling pathways. This study provides the experimental basis for the cytotoxicity of glyoxal on HEK293 cells.


Subject(s)
Glycation End Products, Advanced , Glyoxal , Glycation End Products, Advanced/metabolism , Glyoxal/metabolism , Glyoxal/toxicity , HEK293 Cells , Humans , Kidney/metabolism , Oxidative Stress
6.
J Food Biochem ; 46(7): e14133, 2022 07.
Article in English | MEDLINE | ID: mdl-35332561

ABSTRACT

ß-Casein, a highly amphiphilic calcium-sensitive phosphoprotein, has specific features that promote its application as a nanocarrier for hydrophobic bioactives. Luteolin is a flavonoid with rich biological activities existing in vegetables and fruits. It is important to understand the interaction of ß-casein with luteolin for the development of ß-casein-based delivery systems. Here, the interaction mode between luteolin and ß-casein was investigated with multispectral techniques, computer simulation, and biological methods. The results demonstrated that luteolin could bind to ß-casein spontaneously which is driven by hydrophobic interactions and statically quench the intrinsic fluorescence of ß-casein. Molecular docking and molecular dynamics simulation showed that ß-casein formed a stable complex with luteolin. It could be concluded that luteolin was encapsulated in ß-casein micelles and exhibited higher antioxidant activity than luteolin alone. These results would be helpful to understand the interaction mechanism of luteolin with ß-casein and indicated that ß-casein micelles were very promising as delivery vehicles for luteolin. PRACTICAL APPLICATIONS: Adding bioactive compounds to food is an efficient method of functional food processing, and protein is an excellent natural carrier for these substances. ß-Casein is a milk protein with a unique amphiphilic structure that makes it a natural nanocarrier for active ingredients. This study created ß-casein nanocarriers and encapsulated luteolin based on the interaction mechanism between ß-casein with luteolin. Luteolin encapsulated in ß-casein micelles demonstrated higher antioxidant activity when compared to free luteolin. This research will provide useful data for the development of functional foods based on ß-casein and luteolin in the food industry.


Subject(s)
Caseins , Micelles , Antioxidants/pharmacology , Caseins/chemistry , Caseins/metabolism , Luteolin , Molecular Docking Simulation , Molecular Dynamics Simulation
7.
Food Chem Toxicol ; 160: 112779, 2022 Feb.
Article in English | MEDLINE | ID: mdl-34958803

ABSTRACT

Acrolein is a highly reactive unsaturated hazardous air pollutant, which is extremely irritating to the respiratory tract. Luteolin, an active flavonoid compound, possesses multiple biological activities. The purpose of this study was to evaluate the mechanism of the inhibition of acrolein-induced human bronchial epithelial (BEAS-2B) cells cytotoxicity by luteolin using network pharmacology and cell biology technology. Firstly, network pharmacology results indicated that oxidative stress processes might play an important role in luteolin inhibiting lung injury. Next, it was verified at the cellular level. Reactive oxygen species (ROS) generation increased, glutathione (GSH) level decreased after exposure to acrolein. MAPK signaling pathways were activated, which activated downstream IκBα/NF-κB signaling pathways. Meanwhile, acrolein caused oxidative DNA damage and double-strand breaks, induced DNA damage response (DDR) and apoptosis. These adverse effects were significantly reversed by luteolin, which inhibited the activation of MAPK/IκBα/NF-κB and DDR pathways, and reduced the ratio of Bax/Bcl-2. Moreover, luteolin also had a similar effect to antioxidant N-acetyl cysteine (NAC) in the regulation of signaling transduction mechanisms, which indicated that the regulation of oxidative stress played an important role in the process. These results provide an experimental basis for elucidating the molecular mechanisms of the inhibition of acrolein-induced BEAS-2B cytotoxicity with luteolin.


Subject(s)
Acrolein/toxicity , Air Pollutants/toxicity , Epithelial Cells/drug effects , Luteolin/pharmacology , Apoptosis/drug effects , Bronchi/cytology , Bronchi/drug effects , Bronchi/metabolism , DNA Damage/drug effects , Epithelial Cells/cytology , Epithelial Cells/metabolism , Glutathione/metabolism , Humans , Network Pharmacology , Oxidative Stress/drug effects , Reactive Oxygen Species/metabolism , Signal Transduction/drug effects
8.
Toxicology ; 466: 153083, 2022 01 30.
Article in English | MEDLINE | ID: mdl-34958888

ABSTRACT

Acrolein is a hazardous air pollutant for humans and is responsible for many pulmonary diseases, but the underlying mechanisms have not been completely elucidated. This work is focused on the genotoxicity effects of human bronchial epithelial (BEAS-2B) cells induced by acrolein (20, 40, 80 µM). The molecular mechanism was investigated base on DNA damage and mitochondrial apoptosis pathways. The results showed that after exposure to acrolein, the cell viability, glutathione (GSH) of BEAS-2B cells were reduced. Reactive oxygen species (ROS) level significantly increased, accompanied by increased levels of DNA damage-related indicators 8-hydroxy-2 deoxyguanosine (8-OHdG), DNA content of comet tail (Tail DNA%), olive tail moment (OTM), and nucleus morphology. Cell arrested at the G2/M phase. Then, the DNA damage response (DDR) signaling pathway (Ataxia-telangiectasia-mutated (ATM) and Rad-3-related (ATR)/Chk1 and ATM/Chk2) and the consequent cell cycle checkpoints were activated. The expression of γ-H2AX was significantly increased, indicating that acrolein induced DNA double-strand breaks. Molecular docking assay showed that acrolein bound to DNA in a spontaneous process. Moreover, mitochondrial apoptosis pathway involved in apoptosis, mitochondrial membrane potential (MMP) and adenosine triphosphate (ATP) content of BEAS-2B cells were significantly reduced, and the apoptosis rate was significantly increased. The protein expression of Bax/Bcl-2 and Cleaved Caspase-3 were increased, and JNK signaling pathway was activated. All the results indicated that acrolein induced DNA damage, activated DDR and mitochondrial apoptosis pathways, which might be the pivotal factors to mediate cytotoxicity in BEAS-2B cells.


Subject(s)
Acrolein/toxicity , Apoptosis/drug effects , DNA Damage/drug effects , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Mitochondria/drug effects , Mitochondria/metabolism , Acrolein/chemistry , Caspase 3/metabolism , Cell Cycle Checkpoints/drug effects , Cell Line , Cell Survival/drug effects , Glutathione/metabolism , Histones/metabolism , Humans , Membrane Potential, Mitochondrial/drug effects , Molecular Docking Simulation , Proto-Oncogene Proteins c-bcl-2/metabolism , Reactive Oxygen Species/metabolism , Signal Transduction
9.
Environ Toxicol ; 37(4): 708-719, 2022 Apr.
Article in English | MEDLINE | ID: mdl-34908224

ABSTRACT

Acrolein is a ubiquitous environmental pollutant that produced by the incomplete combustion of cigarette smoke, forest fires, petroleum fuels, plastic materials, and cooking fumes. Inhalation is a common form of people exposure to acrolein, increasing evidence demonstrates that acrolein impairs the cardiovascular system by targeting vascular endothelial cells. However, the molecular mechanism of the cytotoxicity of acrolein exposure on vascular endothelial cells remains unclear. This work focused on the toxicity of acrolein on human umbilical vein endothelial cells (HUVECs). The molecular mechanism was studied based on oxidative stress, DNA damage response (DDR), and mitochondrial apoptosis pathways. After HUVECs were treated with 12.5, 25, and 50 µM acrolein for 24 h, cell viability, cell colony formation, mitochondrial membrane potential, and adenosine triphosphate content significantly reduced, and acrolein increased intracellular reactive oxygen species, apoptosis rate, and 8-hydroxy-2 deoxyguanosine (8-OHdG) level. Furthermore, p38MAPK and c-Jun N-terminal kinase signaling pathways were activated in response to oxidative stress. Moreover, acrolein induced G0/G1phase arrest, promoted the expression of γ-H2AX, activated the DDR signaling pathway (Ataxia-Telangiectasia-Mutated [ATM] and Rad-3-related/Chk1 and ATM/Chk2), and triggered the consequent cell cycle checkpoints. Finally, the protein expression of Bax/Bcl-2 and cleaved Caspase-3 was up-regulated, suggesting apoptosis was induced by triggering the mitochondrial apoptosis pathway. All these results indicated that acrolein induced HUVECs cytotoxicity by regulating oxidative stress, DNA damage, and apoptosis. This study provides a novel perspective on the mechanism of acrolein-induced cardiovascular toxicity, it will be helpful for the prevention of acrolein-induced cardiovascular disease.


Subject(s)
Acrolein , Apoptosis , Acrolein/toxicity , DNA Damage , Human Umbilical Vein Endothelial Cells/metabolism , Humans , Oxidative Stress , Reactive Oxygen Species/metabolism
10.
J Mol Recognit ; 35(2): e2946, 2022 02.
Article in English | MEDLINE | ID: mdl-34918387

ABSTRACT

It is an effective strategy to avoid obesity by inhibiting the activity of lipase. In this study, the binding mechanism of lipase and Lentinus edodes mycelia polysaccharide (LMP) were explored with multi-spectral methods, for example, three-dimensional (3D) fluorescence, Fourier-transformed infrared (FT-IR), and Raman spectra. At 290 K, the binding constant was 2.44 × 105 L/mol, there was only one binding site between LMP and lipase. Static quenching was the quenching mechanism. The major forces were hydrogen bonding and van der Waals force. The binding of LMP to lipase impacted the microenvironment around tyrosine and tryptophan residues. The polarity around these residues was decreased and hydrophobicity was enhanced. This study not only revealed the binding mechanism of LMP on lipase but also provided scientific evidence for expanding the application of LMP in functional food industries.


Subject(s)
Shiitake Mushrooms , Binding Sites , Hydrogen Bonding , Lipase , Molecular Docking Simulation , Polysaccharides , Protein Binding , Shiitake Mushrooms/chemistry , Spectrometry, Fluorescence/methods , Spectroscopy, Fourier Transform Infrared , Thermodynamics
11.
Chem Biodivers ; 18(5): e2001069, 2021 May.
Article in English | MEDLINE | ID: mdl-33855794

ABSTRACT

Breast cancer is one of the most common cancer with high morbidity and mortality in women. This study aimed to explore the potential mechanism of costunolide inducing MCF-7 cells apoptosis by multi-spectroscopy, molecular docking, and cell experiments. The results manifested that costunolide interacted with calf thymus DNA (ct-DNA) in a spontaneous manner, and the minor groove as the preferential binding mode. Furthermore, costunolide inhibited cell proliferation and colony formation. Hoechst 33258 staining showed that cell apoptosis induced by costunolide might be related to DNA damage. The apoptosis mechanism relied on regulating the protein expression of Bax, Bcl-2, p53, Caspase-3 and the activation of p38MAPK and nuclear factor κB (NF-κB) pathways. This study will provide some experimental basis and potential therapeutic strategy for breast cancer treatment.


Subject(s)
Antineoplastic Agents, Phytogenic/pharmacology , Apoptosis/drug effects , Molecular Docking Simulation , Sesquiterpenes/pharmacology , Animals , Antineoplastic Agents, Phytogenic/chemistry , Cattle , Cell Proliferation/drug effects , DNA/chemistry , DNA/drug effects , DNA Damage , Drug Screening Assays, Antitumor , Female , Humans , MCF-7 Cells , Sesquiterpenes/chemistry , Spectrophotometry, Ultraviolet
12.
BMC Cancer ; 21(1): 122, 2021 Feb 05.
Article in English | MEDLINE | ID: mdl-33546637

ABSTRACT

BACKGROUND: The relationship between cancer and coagulation has been intensively studied in recent years; however, the effects of coagulation factors on oral squamous cell carcinoma (OSCC) have rarely been reported. This study aimed to investigate the relationship between preoperative D-dimer (DD), fibrinogen (FIB), platelets (PLT) and OSCC, as well as the prognostic value of DD, FIB and PLT in OSCC. METHODS: We retrospectively investigated a total of 202 patients with OSCC treated at Guanghua Hospital of Stomatology, Sun Yat-sen University. Baseline demographic and clinicopathological information as well as both preoperative and postoperative DD, FIB and PLT results were collected from each patient, and patients with primary OSCC were followed up for disease progression, death or the end of the study. The correlations between preoperative DD, FIB, PLT and other clinical features, as well as the therapeutic effect and PFS were analysed statistically, and postoperative DD and surgical parameters were also analysed. RESULTS: Preoperative DD was significantly correlated with T stage, N stage, clinical stage and relapse of OSCC (P = 0.000, 0.001, 0.000 and 0.000, respectively). Univariate Cox regression analyses showed that high preoperative DD predicted poor prognosis in patients with OSCC (HR = 2.1, P = 0.033), while FIB and PLT showed no prognostic values. Postoperative DD was significantly correlated with preoperative DD and surgical type but not the duration of surgery (P = 0.005, 0.001 and 0.244, respectively). CONCLUSION: In this study, we suggested that high preoperative DD level may serve as an indicator for synchronous neck dissection in patients with T1, 2 OSCC, and the elevated DD level might be the marker of disease progression in patient follow up.


Subject(s)
Biomarkers, Tumor/blood , Blood Platelets/pathology , Carcinoma, Squamous Cell/pathology , Fibrin Fibrinogen Degradation Products/analysis , Fibrinogen/analysis , Mouth Neoplasms/pathology , Preoperative Care , Carcinoma, Squamous Cell/blood , Carcinoma, Squamous Cell/surgery , Female , Follow-Up Studies , Humans , Male , Middle Aged , Mouth Neoplasms/blood , Mouth Neoplasms/surgery , Prognosis , Retrospective Studies
13.
Sci Total Environ ; 769: 144357, 2021 May 15.
Article in English | MEDLINE | ID: mdl-33477050

ABSTRACT

Shallow lakes have a tendency to settle into turbid or clear-water states, the latter having lower concentrations of total phosphorus (TP). However, how P-cycling is affected by and perhaps contributes to maintaining the different states is not well understood, in part because quantifying the processes involved by traditional methods is difficult. To elucidate these processes, we conducted experiments using 32P-PO4 as a tracer on samples collected from the unrestored, unvegetated sections of Huizhou West Lake where turbid water prevails as well as the restored, clear-water, macrophyte-rich waters of the lake. We measured PO4 uptake rates, 32P-PO4 accumulation by various plankton size-fractions (picoplankton (0.2-2 µm), nanoplankton (2-20 µm) and microplankton (>20 µm)) as well as release rates of 32P-PO4 by labelled plankton. Our results revealed slow PO4 uptake in the turbid state due to low PO4 concentration, slow recycling of the high particulate P, and high levels of particulate 32P which may allow for continuous high growth and biomass of phytoplankton. In contrast, in the clear water state, the uptake of PO4 was rapid due to a higher PO4 concentration, the recycling rates of particulate 32P were high and the levels of particulate 32P were low, potentially constraining the phytoplankton growth. A greater proportion of particulate 32P was in the microplankton fraction in clear waters, suggesting that grazing by microplankton may play an important role in the rapid P recycling in clear-waters. Our results provide some evidence for a reinforcement of the turbid conditions (low recycling rate) when the lake is in a turbid state and vice versa when in the clear water state. The results add new knowledge to the understanding of P cycling in shallow lakes and illustrate the utility of using P-kinetics in contrasting states in plankton communities.


Subject(s)
Lakes , Plankton , Biomass , Eutrophication , Phosphorus , Phytoplankton
14.
Sci Rep ; 10(1): 6755, 2020 04 21.
Article in English | MEDLINE | ID: mdl-32317724

ABSTRACT

Rhododendron lapponicum L. is a familiar ornamental plant worldwide with important ornamental and economic value. However, a full-length R. lapponicum transcriptome is still lacking. In the present study, we used the Pacific Biosciences single-molecule real-time sequencing technology to generate the R. lapponicum transcriptome. A total of 346,270 full-length non-chimeric reads were generated, from which we obtained 75,002 high-quality full-length transcripts. We identified 55,255 complete open reading frames, 7,140 alternative splicing events and 2,011 long non-coding RNAs. In gene annotation analyses, 71,155, 33,653, 30,359 and 31,749 transcripts were assigned to the Nr, GO, COG and KEGG databases, respectively. Additionally, 3,150 transcription factors were detected. KEGG pathway analysis showed that 96 transcripts were identified coding for the enzymes associated with anthocyanin synthesis. Furthermore, we identified 64,327 simple sequence repeats from 45,319 sequences, and 150 pairs of primers were randomly selected to develop SSR markers. This study provides a large number of full-length transcripts, which will facilitate the further study of the genetics of R. lapponicum.


Subject(s)
Gene Expression Regulation, Plant , Plant Proteins/genetics , RNA, Long Noncoding/genetics , Rhododendron/genetics , Transcription, Genetic , Transcriptome , Alternative Splicing , Anthocyanins/biosynthesis , Gene Expression Profiling , Gene Ontology , High-Throughput Nucleotide Sequencing , Microsatellite Repeats , Molecular Sequence Annotation , Open Reading Frames , Plant Proteins/classification , Plant Proteins/metabolism , RNA, Long Noncoding/classification , RNA, Long Noncoding/metabolism , Rhododendron/metabolism
15.
Int J Biol Macromol ; 152: 981-989, 2020 Jun 01.
Article in English | MEDLINE | ID: mdl-31765755

ABSTRACT

The inhibition of α-glucosidase activity is a prospective approach to prevent postprandial hyperglycemia. As two flavonoids extracted from citrus fruits, eriocitrin and eriodictyol have similar structures and show multiple pharmacological activities. In order to investigate the effects of flavonoids structure on enzyme inhibition, spectroscopy and molecular docking analysis were used. Saccharomyces cerevisiae α-glucosidase (GH13) was used for studying the inhibitory mechanism by multi-spectroscopic analysis. Results indicated that they could quench the intrinsic fluorescence of α-glucosidase, the binding constants at 298 K were (7.02 ± 0.22) × 104 and (4.57 ± 0.16) × 104 L mol-1, respectively. The interaction between them with α-glucosidase were mainly driven by hydrophobic interaction, they induced conformational changes of α-glucosidase. The human α-glucosidase (C-terminal maltase-glucoamylase, GH31) was used in the molecular docking analysis to determine the interaction of eriocitrin and eriodictyol with the α-glucosidase. The results revealed that they could bind with α-glucosidase and might cause the decrease of α-glucosidase activity. The inhibitory effect of eriocitrin was stronger than that of eriodictyol, which might be due to the position and amount of hydroxyl groups. This work confirmed two novel α-glucosidase inhibitors and provided the structure-function relationship of flavonoids in inhibition of α-glucosidase activity.


Subject(s)
Flavonoids/chemistry , Flavonoids/pharmacology , Glycoside Hydrolase Inhibitors/chemistry , Glycoside Hydrolase Inhibitors/pharmacology , Molecular Docking Simulation , alpha-Glucosidases/metabolism , Flavonoids/metabolism , Glycoside Hydrolase Inhibitors/metabolism , Humans , Protein Conformation , Spectrum Analysis , alpha-Glucosidases/chemistry
16.
PLoS One ; 11(12): e0168494, 2016.
Article in English | MEDLINE | ID: mdl-28005940

ABSTRACT

Zebra mussels (Dreissena polymorpha) are known to increase water clarity and affect ecosystem processes in invaded lakes. During the last decade, the conspecific quagga mussels (D. rostriformis bugensis) have displaced zebra mussels in many ecosystems including shallow lakes such as Oneida Lake, New York. In this study, an eight-week mesocosm experiment was conducted to test the hypothesis that the displacement of zebra mussels by quagga mussels leads to further decreases in phytoplankton and increases in water clarity resulting in increases in benthic algae. We found that the presence of zebra mussels alone (ZM), quagga mussels alone (QM), or an equal number of both species (ZQ) reduced total phosphorus (TP) and phytoplankton Chl a. Total suspended solids (TSS) was reduced in ZM and ZQ treatments. Light intensity at the sediment surface was higher in all three mussel treatments than in the no-mussel controls but there was no difference among the mussel treatments. There was no increase in benthic algae biomass in the mussel treatments compared with the no-mussel controls. Importantly, there was no significant difference in nutrient (TP, soluble reactive phosphorus and NO3-) levels, TSS, phytoplankton Chl a, benthic algal Chl a, or light intensity on the sediment surface between ZM, QM and ZQ treatments. These results confirm the strong effect of both mussel species on water clarity and indicate that the displacement of zebra mussel by an equivalent biomass of quagga mussel is not likely to lead to further increases in water clarity, at least for the limnological conditions, including summer temperature, tested in this experiment.


Subject(s)
Bivalvia/growth & development , Dreissena/growth & development , Lakes/chemistry , Seasons , Water Pollution/prevention & control , Water Quality , Water/chemistry , Animals , Dreissena/classification , Ecosystem , Phosphorus/analysis , Water Pollution/analysis
17.
Environ Sci Pollut Res Int ; 22(6): 4418-24, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25304240

ABSTRACT

Competition for resources between coexisting phytoplankton and benthic algae, but with different habitats and roles in functioning of lake ecosystems, profoundly affects dynamics of shallow lakes in the process of eutrophication. An experiment was conducted to test the hypothesis that combined enrichment with nitrogen (N) and phosphorus (P) would be a greater benefit to phytoplankton than benthic algae. The growth of phytoplankton and benthic algae was measured as chlorophyll a (Chl a) in 12 shallow aquatic mesocosms supplemented with N, P, or both. We found that enrichment with N enhanced growth of benthic algae, but not phytoplankton. P enrichment had a negative effect on benthic algal growth, and no effect on the growth of phytoplankton. N+P enrichment had a negative effect on benthic algae, but enhanced the growth of phytoplankton, thus reducing the proportion of benthic algae contributing to the combined biomass of these two groups of primary producers. Thus, combined N+P enrichment is more favorable to phytoplankton in competition with benthic algae than enrichment with either N or P alone. Our study indicates that combined enrichment with N+P promotes the dominance of phytoplankton over benthic algae, with consequences for the trophic dynamics of shallow lake ecosystems.


Subject(s)
Lakes/chemistry , Lakes/microbiology , Light , Nitrogen/pharmacology , Phosphorus/pharmacology , Phytoplankton/growth & development , Seaweed/growth & development , Analysis of Variance , Biomass , Chlorophyll/metabolism , Chlorophyll A , Nitrogen/analysis , Phosphorus/analysis , Phytoplankton/drug effects , Seaweed/drug effects
18.
Ying Yong Sheng Tai Xue Bao ; 21(9): 2279-87, 2010 Sep.
Article in Chinese | MEDLINE | ID: mdl-21265149

ABSTRACT

By the methods of field sampling and laboratory analysis, this paper studied the variations of soil organic carbon (SOC) and total nitrogen (TN) contents and SOC density under different land use types in Shanghai. Significant differences were observed in the test parameters among different land use types. The SOC density was the highest in paddy field (3.86 kg x m(-2)), followed by in upland (3.17 kg x m(-2)), forestland (3.15 kg x m(-2)), abandoned land (2.73 kg x m(-2)), urban lawn (2.65 kg x m(-2)), garden land (2.13 kg x m(-2)), and tidal flat (1.38 kg x m(-2)). The assessment on the effects of three types of land use change on the test parameters showed that the conversion of paddy field into upland resulted in a significant decrease of SOC and TN contents and SOC density; the abandonment of farmland was not an effective way in improving SOC storage in the Yangtze Delta region with abundant water and heat resources, high soil fertility, and high level of field management; while the 4-5 years conversion of paddy field into artificial forestland decreased the SOC and TN contents and SOC density, suggesting that in a short term, the soil carbon sequestration effect of the conversion from paddy field to forestland was at a low level, due to the limitation of vegetation productivity.


Subject(s)
Carbon/analysis , Nitrogen/analysis , Soil/analysis , Trees/growth & development , China , Cities , Crops, Agricultural/growth & development , Ecosystem , Organic Chemicals/analysis , Poaceae/growth & development
19.
Ying Yong Sheng Tai Xue Bao ; 18(4): 933-6, 2007 Apr.
Article in Chinese | MEDLINE | ID: mdl-17615896

ABSTRACT

Vegetation is an important biological factor in the ecological succession of wetland, and the main factor affecting the carbon storage and carbon fixation in wetland ecosystem. By the methods of field survey and lab analysis, this paper studied the carbon storage and carbon fixation during the succession of wetland vegetation on east beach of Chongming Island, and the results showed that there existed greater differences in the existing carbon storage and its allocation in wetland vegetation at its different succession stages. The existing carbon storage of the pioneer plant Scirpus mariqueter was much less than that of Phragmites australis, only accounted for about 13% of the latter. The underground rhizome of P. australis and the aboveground part of S. mariqueter were the main sites of existing carbon storage. P. australis at the later succession stage of wetland vegetation had a stronger capability of carbon fixation than S. mariqueter at the earlier succession stage of the vegetation, with the values being (1.63 +/- 0.39) kg x m(-2) x a(-1) and (0.63 +/- 0.28) kg x m(-2) x a(-1), respectively, suggesting that during the succession of S. mariqueter community to P. australis community, the carbon fixation capability of the wetland ecosystem became stronger.


Subject(s)
Carbon/metabolism , Ecosystem , Plants/metabolism , Wetlands , Carbon Dioxide/metabolism , China , Photosynthesis , Plant Development
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