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1.
Microbiology (Reading) ; 162(7): 1147-1156, 2016 07.
Article in English | MEDLINE | ID: mdl-27170376

ABSTRACT

Pressmud is a substrate derived from sugarcane juice filtrate, and around 26-40 kg of this residue are produced per ton of sugarcane. It is mainly used as fertilizer in crops, and its application in the field is often made without any prior treatment, but, in this research, it was studied for the risk this practice poses for human health. This research was stimulated by previous results indicating the presence of opportunistic pathogens in residues used in various composting systems and the extensive use of fresh pressmud in agriculture. Here, It was assessed the fungal diversity present in both fresh and composting pressmud using 454 pyrosequencing. In addition, heat-tolerant fungi were isolated and surveyed for their enzymatic repertoire of biomass-degrading enzymes (cellulase, xylanase, laccase and polygalacturonase). A wide range of opportunistic pathogens was found among the most abundant taxa in the fresh pressmud, such as Lomentospora prolificans (43.13 %), Trichosporon sp. (10.07 %), Candida tropicalis (7.91 %), and Hormographiella aspergillata (8.19 %). This indicates that fresh pressmud might be a putative source of human pathogenic fungi, presenting a potential threat to human health if applied as fertilizer without any treatment. With regard to the heat-tolerant fungi found in this substrate, all the 110 isolates screened were able to produce at least one of the tested enzymes. The pressmud composting process not only effectively reduces the load of pathogenic fungi, but also creates an interesting environment for fungi able to produce thermostable hydrolytic and oxidative enzymes with biotechnological applications.


Subject(s)
Agaricales/isolation & purification , Ascomycota/isolation & purification , Candida tropicalis/isolation & purification , Saccharum/microbiology , Soil Microbiology , Trichosporon/isolation & purification , Agaricales/genetics , Ascomycota/genetics , Candida tropicalis/genetics , Cellulase/genetics , DNA, Intergenic/genetics , Endo-1,4-beta Xylanases/genetics , Humans , Laccase/genetics , Polygalacturonase/genetics , Soil , Trichosporon/genetics
2.
Antonie Van Leeuwenhoek ; 109(5): 633-51, 2016 May.
Article in English | MEDLINE | ID: mdl-26885975

ABSTRACT

Fungus-growing "attine" ants forage diverse substrates to grow fungi for food. In addition to the mutualistic fungal partner, the colonies of these insects harbor a rich microbiome composed of bacteria, filamentous fungi and yeasts. Previous work reported some Trichoderma species in the fungus gardens of leafcutter ants. However, no studies systematically addressed the putative association of Trichoderma with attine ants, especially in non-leafcutter ants. Here, a total of 62 strains of Trichoderma were analyzed using three molecular markers (ITS, tef1 and rpb2). In addition, 30 out of 62 strains were also morphologically examined. The strains studied correspond to the largest sampling carried out so far for Trichoderma in the attine ant environment. Our results revealed the richness of Trichoderma in this environment, since we found 20 Trichoderma species, including three new taxa described in the present work (Trichoderma attinorum, Trichoderma texanum and Trichoderma longifialidicum spp. nov.) as well as a new phylogenetic taxon (LESF 545). Moreover, we show that all 62 strains grouped within different clades across the Trichoderma phylogeny, which are identical or closely related to strains derived from several other environments. This evidence supports the transient nature of the genus Trichoderma in the attine ant colonies. The discovery of three new species suggests that the dynamic foraging behavior of these insects might be responsible for accumulation of transient fungi into their colonies, which might hold additional fungal taxa still unknown to science.


Subject(s)
Ants/microbiology , Trichoderma/classification , Animals , Base Sequence , Environmental Microbiology , Microbiota , Phylogeny , Polymerase Chain Reaction/methods , Soil Microbiology , Spores, Fungal/cytology , Symbiosis , Trichoderma/cytology , Trichoderma/genetics , Trichoderma/isolation & purification
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