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1.
Nat Commun ; 14(1): 7530, 2023 Nov 20.
Article in English | MEDLINE | ID: mdl-37985669

ABSTRACT

Safety-critical sensory applications, like medical diagnosis, demand accurate decisions from limited, noisy data. Bayesian neural networks excel at such tasks, offering predictive uncertainty assessment. However, because of their probabilistic nature, they are computationally intensive. An innovative solution utilizes memristors' inherent probabilistic nature to implement Bayesian neural networks. However, when using memristors, statistical effects follow the laws of device physics, whereas in Bayesian neural networks, those effects can take arbitrary shapes. This work overcome this difficulty by adopting a variational inference training augmented by a "technological loss", incorporating memristor physics. This technique enabled programming a Bayesian neural network on 75 crossbar arrays of 1,024 memristors, incorporating CMOS periphery for in-memory computing. The experimental neural network classified heartbeats with high accuracy, and estimated the certainty of its predictions. The results reveal orders-of-magnitude improvement in inference energy efficiency compared to a microcontroller or an embedded graphics processing unit performing the same task.

2.
Clin Exp Med ; 10(4): 269-72, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20428919

ABSTRACT

Several methods have been developed to detect common prothrombotic mutations, including factor V Leiden (G1691), prothrombin G20210A, and methylenetetrahydrofolate reductase (MTHFR) C677C. In this study, we compared the accuracy of three different molecular techniques, i.e.: (1) restriction enzyme digestion (RFLP), (2) real time with hybridization probes and final melting curve (Fluorescence Resonance Energy Transfer, FRET), and (3) real time with hydrolysis probes (TaqMan(®)). Sequencing was used as the reference standard. Our data showed that RFLPs analysis for the detection of prothrombotic mutations, albeit easy-to-perform, had a limited reliability for assessing correct genotypes. FRET analysis displayed higher resolution than RFLPs. Additionally, FRET analysis was faster and less tedious than sequencing.


Subject(s)
Genetic Testing/methods , Polymorphism, Genetic , Prothrombin/genetics , Adult , Female , Fluorescence Resonance Energy Transfer , Humans , Male , Nucleic Acid Hybridization/methods , Polymerase Chain Reaction/methods , Polymorphism, Restriction Fragment Length , Sequence Analysis, DNA
3.
Ig Sanita Pubbl ; 64(4): 469-84, 2008.
Article in Italian | MEDLINE | ID: mdl-18985082

ABSTRACT

Scientific evidence confirms that unhealthy life habits play an important role in the development of many disorders in all age groups. This study evaluated the lifestyles of 445 first-year medical students in Palermo and Caltanissetta (Italy) by using an anonymous self-administered multiple choice questionnaire Approximately 97% of participants believe that a healthy diet is either "very important" or "extremely important" but only 44% follow a healthy diet. Fifty eight percent frequently perform sports/physical activities while eight percent report being sedentary. A peak in alcohol consumption was found to generally occur in one single day of the week. Twelve percent of those interviewed report smoking regularly (14% males vs 11% females) and 23% report using or having made use of cannabinoids (32%males vs 16% females). The percentage of regular smokers who use cannabinoids was found to be 68%. A higher percentage of males with respect to females reports having had occasional sex (29% vs 5%). According to 69% of interviewed students, AIDS is the most frequent sexually transmitted infection (STD). Only 1.6% believe that genital warts are the most frequent STD. These results suggest that implementing pre-university courses regarding lifestyles and how these affect health may positively influence students' life habits and lead them to healthier life styles.


Subject(s)
Life Style , Students, Medical , Acquired Immunodeficiency Syndrome/epidemiology , Adult , Alcohol Drinking , Diet , Exercise , Female , Humans , Italy , Male , Marijuana Abuse/epidemiology , Sex Factors , Sexually Transmitted Diseases/epidemiology , Smoking , Sports , Surveys and Questionnaires
4.
J Med Virol ; 80(4): 577-82, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18297707

ABSTRACT

Some individuals have "occult" infection with hepatitis B virus (HBV), defined as presence of HBV genome in the serum or liver tissue without HBV surface antigen (HBsAg) in the serum. The aim of this study was to investigate whether serum antibodies against HBV core antigen in isolation ("anti-HBc alone") are a useful marker of "occult" HBV in patients with or without hepatitis C virus (HCV) infection. "Anti-HBc alone" was detected in the sera of 119/6,544 (1.8%) asymptomatic outpatients referred to the diagnostic laboratory for routine testing for viral hepatitis, 62/607 (10.2%) drug users, and 42/195 (21.5%) patients with hepatocellular carcinoma. Using three in-house nested-PCR amplification assays to detect HBV preS-S (S), precore-core (C), and Pol viral regions, respectively, "occult" HBV sequences were found in 9 of the 223 sera (4.0%) with "anti-HBc alone." The highest prevalence of "occult" HBV sequences (5.9%) was detected in "anti-HBV alone" sera of individuals referred to the diagnostic laboratory without HCV antibodies. Direct sequencing of all PCR products confirmed the specificity of the PCR reactions and revealed the predominance of HBV genotype D. The data presented in this study suggest that detection of "anti-HBc alone" could reflect unrecognized "occult" HBV infection and that physicians should consider investigating such patients with HBV molecular tests.


Subject(s)
Hepatitis B Core Antigens/blood , Hepatitis B/diagnosis , Serologic Tests/methods , Adult , Aged , Aged, 80 and over , DNA, Viral/blood , Female , Genotype , Hepatitis B/complications , Hepatitis B/epidemiology , Hepatitis B virus/classification , Hepatitis B virus/genetics , Hepatitis B virus/isolation & purification , Hepatitis C/complications , Hepatitis C Antibodies/blood , Humans , Male , Middle Aged , Polymerase Chain Reaction/methods , Prevalence , Sensitivity and Specificity , Sentinel Surveillance , Sequence Analysis, DNA
5.
Arthritis Rheum ; 56(5): 1648-57, 2007 May.
Article in English | MEDLINE | ID: mdl-17469159

ABSTRACT

OBJECTIVE: To identify epitopes on Escherichia coli heat-shock protein (HSP) dnaJ or on homologous human HSP dnaJ involved in the induction/modulation of autoimmune inflammation in patients with oligoarticular juvenile idiopathic arthritis (JIA). METHODS: We used a proliferation assay and cytokine production to evaluate the immune responses of synovial fluid mononuclear cells (SFMCs) to pan-HLA-DR binder peptides derived from either homologous or nonhomologous regions on bacterial and human HSP dnaJ. Cytofluorometric analysis was performed in order to phenotype and sort Treg cells. Sorted cells were then analyzed for the expression of the forkhead box P3 (FoxP3) transcription factor, and their regulatory capacity was tested in coculture assays. RESULTS: T cell responses to E coli HSP dnaJ-derived peptides were eminently proinflammatory. Conversely, peptides derived from human HSP dnaJ induced interleukin-10 (IL-10) production from SFMCs of patients with oligoarticular JIA. A positive correlation was found between disease with a better prognosis (persistent oligoarticular JIA) and recognition of 3 human HSP dnaJ-derived peptides. The recognition of the human peptide H134-148 also induced a significantly greater amount of IL-10 in patients with persistent oligoarticular JIA than in those with extended oligoarticular JIA (P = 0.0012). Incubation of SFMCs from patients with persistent oligoarticular JIA with this human epitope increased the percentage of Treg cells and FoxP3 expression. It also induced the recovery of suppressor activity by Treg cells. CONCLUSION: This is the first description of a self-regulating immune modulator circuit active during autoimmune inflammation through recognition of HSP epitopes with different functional properties. These epitopes induce T cells with regulatory function. Such induction correlates with disease severity and prognosis.


Subject(s)
Arthritis, Juvenile/immunology , Epitopes/immunology , HSP40 Heat-Shock Proteins/immunology , Inflammation/immunology , Molecular Chaperones/immunology , T-Lymphocytes, Regulatory/immunology , Adolescent , Adult , Amino Acid Sequence , Arthritis, Juvenile/pathology , Case-Control Studies , Cells, Cultured , Child , Child, Preschool , Escherichia coli Proteins/analysis , Escherichia coli Proteins/immunology , Forkhead Transcription Factors/metabolism , HSP40 Heat-Shock Proteins/analysis , Humans , Inflammation/pathology , Interleukin-10/metabolism , Molecular Chaperones/analysis , Molecular Sequence Data , Prognosis , Severity of Illness Index , Synovial Fluid/cytology , Synovial Fluid/immunology , T-Lymphocytes, Regulatory/pathology
6.
Eur Heart J ; 28(15): 1805-13, 2007 Aug.
Article in English | MEDLINE | ID: mdl-17412728

ABSTRACT

AIMS: We studied plasma erythropoietin (EPO) levels and their relation with CD34(+)VEGFR-2(+) (mature and progenitor endothelial cells) and CD34(+) CD133(+)VEGFR-2(+), or CD34(+) CD117(+)VEGFR-2(+) (early/immature endothelial progenitors) cells in patients with acute myocardial infarction (AMI). METHODS AND RESULTS: Fifty AMI patients undergoing percutaneous coronary intervention (PCI) within 6 h of symptom onset were enrolled. EPO, measured by ELISA, and cell subsets, by cytofluorimetric analysis, were evaluated before PCI, 24 h and 7 days afterwards. Forty-five healthy subjects (CTRLs) were studied. Plasma EPO levels were higher in AMI patients at admission, 24 h, and 7 days (P = 0.04, P = 0.0001, P = 0.001, respectively) than in CTRLs. No correlation was evidenced between EPO and haemoglobin (Hb) or haematocrit at admission or 24 h after AMI. Differently, both Hb and haematocrit inversely correlated with EPO at day 7 (P = 0.0016, P = 0.029, respectively). Plasma EPO levels correlated with CD34(+)CD133(+)VEGFR-2(+) cells at day 7 (P = 0.03). CONCLUSION: AMI patients have increased plasma EPO levels until day 7. In the early phase, plasma EPO levels are Hb-independent; at day 7, an Hb-modulated increase of EPO correlates with the percentage of CD34(+)CD133(+)VEGFR-2(+) cells.


Subject(s)
Erythropoietin/blood , Hemoglobins , Myocardial Infarction/blood , Acute Disease , Antigens, CD34 , Coronary Angiography , Erythroid Precursor Cells , Female , Granulocyte Colony-Stimulating Factor , Humans , Male , Middle Aged , Prognosis , Prospective Studies , Risk Factors , Time Factors , Vascular Endothelial Growth Factor A
7.
Blood Cells Mol Dis ; 38(3): 280-6, 2007.
Article in English | MEDLINE | ID: mdl-17350297

ABSTRACT

PURPOSE: We studied the expression of the chemokine receptor CXCR4 on circulating CD34+ cells of patients with myelofibrosis with myeloid metaplasia (MMM), and examined its relationship to the severity of disease. PATIENTS AND METHODS: Surface and intracellular CXCR4 expression were measured flow cytometrically in 84 consecutive MMM patients, 16 patients with polycythemia vera (PV), and 20 healthy subjects. In 23 MMM patients, CXCR4 gene expression level was also quantitated by real time-RT-PCR in CD34+ cells. RESULTS: The expression of CXCR4 on circulating CD34+ cells was significantly reduced in patients with MMM (P<0.001) as compared to normal controls and patients with PV (P=0.01). The levels of CXCR4 mRNA in CD34+ cells were lower in patients with MMM as compared with normal subjects, and were directly correlated with the degree of CXCR4 surface expression, demonstrating that transcriptional defects were the major cause for receptor down-regulation. No statistical association was found between JAK2V617F mutational status and the extent of CXCR4 down-regulation. CXCR4 expression on CD34+ cells inversely correlated with the number of circulating CD34+ cells (R=-0.55; P<0.001), and was severely down-regulated in high risk patients and patients with a high "myelodepletion severity index". CXCR4 down-regulation was associated with advanced patient age, the presence of severe anemia, thrombocytopenia, and degree of bone marrow fibrosis. CONCLUSIONS: Reduced expression of CXCR4 by CD34+ cells is a characteristic of MMM which is associated with the constitutive mobilization of CD34+ cells and occurs in patients with advanced forms of the disease.


Subject(s)
Primary Myelofibrosis/blood , Receptors, CXCR4/metabolism , Adult , Aged , Aged, 80 and over , Antigens, CD34 , Biomarkers , Blood Cells/metabolism , Down-Regulation , Female , Humans , Male , Middle Aged , Primary Myelofibrosis/physiopathology , RNA, Messenger/analysis , RNA, Messenger/metabolism , Severity of Illness Index
8.
J Clin Oncol ; 23(24): 5688-95, 2005 Aug 20.
Article in English | MEDLINE | ID: mdl-16110028

ABSTRACT

PURPOSE: Endothelial progenitor cells (EPCs) are present in circulation and contribute to vasculogenesis in adults. We measured the number of circulating EPCs in patients with myelofibrosis with myeloid metaplasia (MMM), and we examined the relationship between the number of EPCs and severity of the MMM disease process. PATIENTS AND METHODS: The number of EPCs was measured by assaying the CD34+CD133+ vascular endothelial growth factor receptor 2 (VEGFR2) -positive cell phenotype in 110 MMM patients, 16 patients with other Philadelphia-negative chronic myeloproliferative disorders (Ph-negative CMPDs), and 14 healthy participants. In four MMM patients, the capacity of selected CD34+ cells to form endothelial colonies (CFU-End) in vitro was tested. RESULTS: CD34+, CD133+, and VEGFR2-positive EPCs were detectable in unselected peripheral-blood cells of 50.9% MMM patients, 37.5% control patients, and 21% healthy participants. Patients with MMM had a median of 0.26% EPCs, significantly higher than that in healthy controls (median, 0%) and in patients with other Ph-negative CMPDs (median, 0.1%). In 14.5% of MMM patients, the numbers of EPCs were greater than the highest value found in patients with other Ph-negative CMPDs. CD34+ selected cells produced colony-forming unit-endothelial (CFU-End), which were vascular endothelial (VE) -cadherin positive, CD31+, von Willebrand factor positive, and CD45-. In MMM patients, the larger the number of EPCs, the smaller the number of circulating immature myeloid cells and circulating CD45+CD34+ hematopoietic progenitor cells. Increased numbers of EPCs were associated with younger age and a diagnosis of prefibrotic MMM. CONCLUSION: Circulating EPCs are elevated in MMM patients in the early stage of the disease. Heightened mobilization of EPCs may represent an important mechanism for development of neoangiogenesis in MMM.


Subject(s)
Antigens, CD34/blood , Glycoproteins/blood , Hematopoietic Stem Cells/metabolism , Peptides/blood , Primary Myelofibrosis/blood , Vascular Endothelial Growth Factor Receptor-2/blood , AC133 Antigen , Adult , Aged , Aged, 80 and over , Antigens, CD , Female , Flow Cytometry , Humans , Linear Models , Logistic Models , Male , Middle Aged , Statistics, Nonparametric
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